RNA–Protein interactions for RNA: ENST00000545942.5

CHD4-214, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 1 (best)

Gene CHD4, Length 1,317 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-214ENST00000545942 LARP4BQ92615 738 aaKnown RBP24.81■■□□□ 1.56
CHD4-214ENST00000545942 CCSER1Q9C0I3 900 aa24.81■■□□□ 1.56
CHD4-214ENST00000545942 HAPLN2Q9GZV7 340 aa24.81■■□□□ 1.56
CHD4-214ENST00000545942 FBXL21Q9UKT6 434 aa24.81■■□□□ 1.56
CHD4-214ENST00000545942 TBX20Q9UMR3 447 aa24.81■■□□□ 1.56
CHD4-214ENST00000545942 POLIQ9UNA4 740 aa24.81■■□□□ 1.56
CHD4-214ENST00000545942 CLIC4Q9Y696 253 aa24.81■■□□□ 1.56
CHD4-214ENST00000545942 ZFP37Q9Y6Q3 630 aaPredicted RBP24.81■■□□□ 1.56
CHD4-214ENST00000545942 VWA8A3KMH1 1905 aa24.81■■□□□ 1.56
CHD4-214ENST00000545942 HNRNPDLO14979 420 aaKnown RBP24.8■■□□□ 1.56
CHD4-214ENST00000545942 TRAK2O60296 914 aa24.8■■□□□ 1.56
CHD4-214ENST00000545942 CXCL8P10145 99 aa24.8■■□□□ 1.56
CHD4-214ENST00000545942 SYT1P21579 422 aa24.8■■□□□ 1.56
CHD4-214ENST00000545942 KYAT1Q16773 422 aa24.8■■□□□ 1.56
CHD4-214ENST00000545942 VARS2Q5ST30 1063 aaKnown RBP24.8■■□□□ 1.56
CHD4-214ENST00000545942 SLC8B1Q6J4K2 584 aa24.8■■□□□ 1.56
CHD4-214ENST00000545942 SLC44A3Q8N4M1 653 aa24.8■■□□□ 1.56
CHD4-214ENST00000545942 TMEM105Q8N8V8 129 aa24.8■■□□□ 1.56
CHD4-214ENST00000545942 NARSO43776 548 aaKnown RBP24.79■■□□□ 1.56
CHD4-214ENST00000545942 TBCAO75347 108 aaKnown RBP24.79■■□□□ 1.56
CHD4-214ENST00000545942 PIGRP01833 764 aa24.79■■□□□ 1.56
CHD4-214ENST00000545942 CLCN5P51795 746 aa24.79■■□□□ 1.56
CHD4-214ENST00000545942 PTPAQ15257 358 aa24.79■■□□□ 1.56
CHD4-214ENST00000545942 INTS4Q96HW7 963 aaKnown RBP24.79■■□□□ 1.56
CHD4-214ENST00000545942 IRF2BPLQ9H1B7 796 aa24.79■■□□□ 1.56
CHD4-214ENST00000545942 ZHX3Q9H4I2 956 aa24.79■■□□□ 1.56
CHD4-214ENST00000545942 GTF3C5Q9Y5Q8 519 aaPredicted RBP24.79■■□□□ 1.56
CHD4-214ENST00000545942 TRIP11Q15643 1979 aa24.78■■□□□ 1.56
CHD4-214ENST00000545942 TTC26A0AVF1 554 aa24.78■■□□□ 1.56
CHD4-214ENST00000545942 ANHXE9PGG2 379 aa24.78■■□□□ 1.56
CHD4-214ENST00000545942 H7C4K7 107 aa24.78■■□□□ 1.56
CHD4-214ENST00000545942 ABCD1P33897 745 aa24.78■■□□□ 1.56
CHD4-214ENST00000545942 DDIT3P35638 169 aa24.78■■□□□ 1.56
CHD4-214ENST00000545942 NTHL1P78549 312 aa24.78■■□□□ 1.56
CHD4-214ENST00000545942 ROR1Q01973 937 aa24.78■■□□□ 1.56
CHD4-214ENST00000545942 RESTQ13127 1097 aa24.78■■□□□ 1.56
CHD4-214ENST00000545942 FLCNQ8NFG4 579 aa24.78■■□□□ 1.56
CHD4-214ENST00000545942 ZNF461Q8TAF7 563 aa24.78■■□□□ 1.56
CHD4-214ENST00000545942 EPSTI1Q96J88 318 aa24.78■■□□□ 1.56
CHD4-214ENST00000545942 SUSD3Q96L08 255 aa24.78■■□□□ 1.56
CHD4-214ENST00000545942 BACH2Q9BYV9 841 aa24.78■■□□□ 1.56
CHD4-214ENST00000545942 TUBGCP4Q9UGJ1 667 aa24.78■■□□□ 1.56
CHD4-214ENST00000545942 CDH7Q9ULB5 785 aa24.78■■□□□ 1.56
CHD4-214ENST00000545942 GALR2O43603 387 aaPredicted RBP24.77■■□□□ 1.56
CHD4-214ENST00000545942 MARCKSP29966 332 aaPredicted RBP24.77■■□□□ 1.56
CHD4-214ENST00000545942 MCM4P33991 863 aa24.77■■□□□ 1.56
CHD4-214ENST00000545942 PPP2R3AQ06190 1150 aa24.77■■□□□ 1.56
CHD4-214ENST00000545942 HTR4Q13639 388 aa24.77■■□□□ 1.56
CHD4-214ENST00000545942 MRPL58Q14197 206 aaKnown RBP24.77■■□□□ 1.56
CHD4-214ENST00000545942 SPECC1Q5M775 1068 aa24.77■■□□□ 1.56
CHD4-214ENST00000545942 SIX5Q8N196 739 aa24.77■■□□□ 1.56
CHD4-214ENST00000545942 KIF12Q96FN5 646 aa24.77■■□□□ 1.56
CHD4-214ENST00000545942 WNT16Q9UBV4 365 aa24.77■■□□□ 1.56
CHD4-214ENST00000545942 FBXO2Q9UK22 296 aaPredicted RBP24.77■■□□□ 1.56
CHD4-214ENST00000545942 SRPRBQ9Y5M8 271 aaKnown RBP24.77■■□□□ 1.56
CHD4-214ENST00000545942 MYH11P35749 1972 aa24.77■■□□□ 1.56
CHD4-214ENST00000545942 OGTO15294 1046 aa24.76■■□□□ 1.55
CHD4-214ENST00000545942 TBC1D4O60343 1298 aa24.76■■□□□ 1.55
CHD4-214ENST00000545942 ABLIM3O94929 683 aa24.76■■□□□ 1.55
CHD4-214ENST00000545942 CFHP08603 1231 aa24.76■■□□□ 1.55
CHD4-214ENST00000545942 SRFP11831 508 aa24.76■■□□□ 1.55
CHD4-214ENST00000545942 ELF1P32519 619 aa24.76■■□□□ 1.55
CHD4-214ENST00000545942 TNFSF9P41273 254 aa24.76■■□□□ 1.55
CHD4-214ENST00000545942 CWF19L1Q69YN2 538 aaKnown RBP24.76■■□□□ 1.55
CHD4-214ENST00000545942 USP49Q70CQ1 688 aa24.76■■□□□ 1.55
CHD4-214ENST00000545942 KRI1Q8N9T8 703 aaKnown RBP24.76■■□□□ 1.55
CHD4-214ENST00000545942 APPL2Q8NEU8 664 aa24.76■■□□□ 1.55
CHD4-214ENST00000545942 FIZ1Q96SL8 496 aa24.76■■□□□ 1.55
CHD4-214ENST00000545942 CCDC39Q9UFE4 941 aa24.76■■□□□ 1.55
CHD4-214ENST00000545942 UBQLN1Q9UMX0 589 aaKnown RBP24.76■■□□□ 1.55
CHD4-214ENST00000545942 NUMBLQ9Y6R0 609 aa24.76■■□□□ 1.55
CHD4-214ENST00000545942 PIEZO1Q92508 2521 aa24.76■■□□□ 1.55
CHD4-214ENST00000545942 CITO14578 2027 aa24.75■■□□□ 1.55
CHD4-214ENST00000545942 WDR27A2RRH5 827 aa24.75■■□□□ 1.55
CHD4-214ENST00000545942 FAM189A1O60320 539 aa24.75■■□□□ 1.55
CHD4-214ENST00000545942 NPR3P17342 541 aa24.75■■□□□ 1.55
CHD4-214ENST00000545942 CYP3A5P20815 502 aa24.75■■□□□ 1.55
CHD4-214ENST00000545942 LRPAP1P30533 357 aa24.75■■□□□ 1.55
CHD4-214ENST00000545942 GTF2BQ00403 316 aa24.75■■□□□ 1.55
CHD4-214ENST00000545942 SPAG1Q07617 926 aa24.75■■□□□ 1.55
CHD4-214ENST00000545942 PABPC1LQ4VXU2 614 aaKnown RBP24.75■■□□□ 1.55
CHD4-214ENST00000545942 FAM173BQ6P4H8 233 aa24.75■■□□□ 1.55
CHD4-214ENST00000545942 MAP4K3Q8IVH8 894 aa24.75■■□□□ 1.55
CHD4-214ENST00000545942 FGF13Q92913 245 aa24.75■■□□□ 1.55
CHD4-214ENST00000545942 TSPAN18Q96SJ8 248 aa24.75■■□□□ 1.55
CHD4-214ENST00000545942 PHOX2BQ99453 314 aa24.75■■□□□ 1.55
CHD4-214ENST00000545942 RPF1Q9H9Y2 349 aaKnown RBP24.75■■□□□ 1.55
CHD4-214ENST00000545942 HCFC1R1Q9NWW0 138 aa24.75■■□□□ 1.55
CHD4-214ENST00000545942 DNMT3BQ9UBC3 853 aaKnown RBP24.75■■□□□ 1.55
CHD4-214ENST00000545942 STK17AQ9UEE5 414 aa24.75■■□□□ 1.55
CHD4-214ENST00000545942 FBXL5Q9UKA1 691 aa24.75■■□□□ 1.55
CHD4-214ENST00000545942 A0A0B4J269 797 aa24.74■■□□□ 1.55
CHD4-214ENST00000545942 XPOTO43592 962 aaKnown RBP24.74■■□□□ 1.55
CHD4-214ENST00000545942 ATF2P15336 505 aa24.74■■□□□ 1.55
CHD4-214ENST00000545942 NMT1P30419 496 aaKnown RBP24.74■■□□□ 1.55
CHD4-214ENST00000545942 TXLNAP40222 546 aa24.74■■□□□ 1.55
CHD4-214ENST00000545942 ARPP19P56211 112 aa24.74■■□□□ 1.55
CHD4-214ENST00000545942 ZBTB6Q15916 424 aa24.74■■□□□ 1.55
CHD4-214ENST00000545942 ENOX2Q16206 610 aaKnown RBP24.74■■□□□ 1.55
CHD4-214ENST00000545942 CTXN3Q4LDR2 81 aa24.74■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms