RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 PRELPP51888 382 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 MFAP3P55082 362 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 RWDD2BP57060 319 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 MRPS25P82663 173 aaKnown RBP6.92□□□□□ -1.3
SNHG1-225ENST00000545920 CENPCQ03188 943 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 ACVR2BQ13705 512 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 CTTNQ14247 550 aaKnown RBP6.92□□□□□ -1.3
SNHG1-225ENST00000545920 TNIP1Q15025 636 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 RASA2Q15283 850 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 TEAD4Q15561 434 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 SKIDA1Q1XH10 827 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 ZNF568Q3ZCX4 644 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 CERKLQ49MI3 558 aaPredicted RBP6.92□□□□□ -1.3
SNHG1-225ENST00000545920 ZDHHC24Q6UX98 284 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 ARHGEF18Q6ZSZ5 1173 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 OTOP1Q7RTM1 612 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 TRPM8Q7Z2W7 1104 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 PODNQ7Z5L7 613 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 SLC13A5Q86YT5 568 aaPredicted RBP6.92□□□□□ -1.3
SNHG1-225ENST00000545920 FAM178BQ8IXR5 827 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 MYCT1Q8N699 235 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 MAB21L3Q8N8X9 362 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 SH3TC2Q8TF17 1288 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 CD101Q93033 1021 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 RAB3IPQ96QF0 476 aaPredicted RBP6.92□□□□□ -1.3
SNHG1-225ENST00000545920 ACCSQ96QU6 501 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 JPH2Q9BR39 696 aaPredicted RBP6.92□□□□□ -1.3
SNHG1-225ENST00000545920 FGFBP2Q9BYJ0 223 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 TRIM7Q9C029 511 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 TMX4Q9H1E5 349 aaPredicted RBP6.92□□□□□ -1.3
SNHG1-225ENST00000545920 EPB41L4BQ9H329 900 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 EBF2Q9HAK2 575 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 AVENQ9NQS1 362 aaPredicted RBP6.92□□□□□ -1.3
SNHG1-225ENST00000545920 MAP3K20Q9NYL2 800 aaKnown RBP6.92□□□□□ -1.3
SNHG1-225ENST00000545920 GRHL1Q9NZI5 618 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 CTTNBP2NLQ9P2B4 639 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 CTNNAL1Q9UBT7 734 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 CNOT8Q9UFF9 292 aaKnown RBP6.92□□□□□ -1.3
SNHG1-225ENST00000545920 LGALS13Q9UHV8 139 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 LRFN2Q9ULH4 789 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 PPP1R9AQ9ULJ8 1098 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 EXOC7Q9UPT5 735 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 MRPL11Q9Y3B7 192 aaKnown RBP6.92□□□□□ -1.3
SNHG1-225ENST00000545920 USP15Q9Y4E8 981 aaPredicted RBP6.92□□□□□ -1.3
SNHG1-225ENST00000545920 ALG6Q9Y672 507 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 WASF2Q9Y6W5 498 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 ATRNL1Q5VV63 1379 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 ZMYM2Q9UBW7 1377 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 SBF2Q86WG5 1849 aa6.92□□□□□ -1.3
SNHG1-225ENST00000545920 IGLV3-22A0A075B6J6 115 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 NPHP3-ACAD11A0A0J9YXS1 232 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 F8W031 263 aaPredicted RBP6.91□□□□□ -1.3
SNHG1-225ENST00000545920 EML1O00423 815 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 DNM1LO00429 736 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 ZBTB39O15060 712 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 RIPK2O43353 540 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 THAP12O43422 761 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 SNX3O60493 162 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 SORBS3O60504 671 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 CAND2O75155 1236 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 ENTPD3O75355 529 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 GJB6O95452 261 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 POLR2MP0CAP2 368 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 BMP3P12645 472 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 CCND1P24385 295 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 TMOD1P28289 359 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 CETN2P41208 172 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 CCNG1P51959 295 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 PLTPP55058 493 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 BPIFB4P59827 614 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 RNASE9P60153 205 aaKnown RBP6.91□□□□□ -1.3
SNHG1-225ENST00000545920 ELF3P78545 371 aaPredicted RBP6.91□□□□□ -1.3
SNHG1-225ENST00000545920 ICA1Q05084 483 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 PTK6Q13882 451 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 STAT4Q14765 748 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 TRADDQ15628 312 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 ENOX2Q16206 610 aaKnown RBP6.91□□□□□ -1.3
SNHG1-225ENST00000545920 CNGA2Q16280 664 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 AOC3Q16853 763 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 SLC4A8Q2Y0W8 1093 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 GALNTL6Q49A17 601 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 EPC2Q52LR7 807 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 CMPK2Q5EBM0 449 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 SLC27A3Q5K4L6 730 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 TBCELQ5QJ74 424 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 LRCH2Q5VUJ6 765 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 RNF43Q68DV7 783 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 TTBK2Q6IQ55 1244 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 CCDC137Q6PK04 289 aaKnown RBP6.91□□□□□ -1.3
SNHG1-225ENST00000545920 USP17L6PQ6QN14 398 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 B3GNT9Q6UX72 402 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 RGS9BPQ6ZS82 235 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 KCTD1Q719H9 257 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 MIGA2Q7L4E1 593 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 FAM160B2Q86V87 743 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 DDX42Q86XP3 938 aaKnown RBP eCLIP6.91□□□□□ -1.3
SNHG1-225ENST00000545920 FAM71AQ8IYT1 594 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 PRELID2Q8N945 189 aa6.91□□□□□ -1.3
SNHG1-225ENST00000545920 KDF1Q8NAX2 398 aaPredicted RBP6.91□□□□□ -1.3
SNHG1-225ENST00000545920 LMO3Q8TAP4 145 aa6.91□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms