RNA–Protein interactions for RNA: ENST00000545707.5

LDLR-204, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,429 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-204ENST00000545707 SNRPFP62306 86 aaKnown RBP16.84■□□□□ 0.29
LDLR-204ENST00000545707 SWSAP1Q6NVH7 229 aa16.84■□□□□ 0.29
LDLR-204ENST00000545707 CROCCP2Q86T23 111 aa16.84■□□□□ 0.29
LDLR-204ENST00000545707 PNMA8AQ86V59 439 aaPredicted RBP16.84■□□□□ 0.29
LDLR-204ENST00000545707 GPD1LQ8N335 351 aa16.84■□□□□ 0.29
LDLR-204ENST00000545707 P3H4Q92791 437 aa16.84■□□□□ 0.29
LDLR-204ENST00000545707 TBC1D31Q96DN5 1066 aa16.84■□□□□ 0.29
LDLR-204ENST00000545707 NCAPGQ9BPX3 1015 aa16.84■□□□□ 0.29
LDLR-204ENST00000545707 PLVAPQ9BX97 442 aa16.84■□□□□ 0.29
LDLR-204ENST00000545707 ANKEF1Q9NU02 776 aa16.84■□□□□ 0.29
LDLR-204ENST00000545707 SLC12A4Q9UP95 1085 aa16.84■□□□□ 0.29
LDLR-204ENST00000545707 TBC1D12O60347 775 aa16.83■□□□□ 0.28
LDLR-204ENST00000545707 TNNI1P19237 187 aa16.83■□□□□ 0.28
LDLR-204ENST00000545707 DSG3P32926 999 aa16.83■□□□□ 0.28
LDLR-204ENST00000545707 PTK6Q13882 451 aa16.83■□□□□ 0.28
LDLR-204ENST00000545707 BAATQ14032 418 aaPredicted RBP16.83■□□□□ 0.28
LDLR-204ENST00000545707 ATP13A4Q4VNC1 1196 aa16.83■□□□□ 0.28
LDLR-204ENST00000545707 HP1BP3Q5SSJ5 553 aaPredicted RBP16.83■□□□□ 0.28
LDLR-204ENST00000545707 CCDC63Q8NA47 563 aa16.83■□□□□ 0.28
LDLR-204ENST00000545707 FLAD1Q8NFF5 587 aa16.83■□□□□ 0.28
LDLR-204ENST00000545707 C1orf112Q9NSG2 853 aa16.83■□□□□ 0.28
LDLR-204ENST00000545707 PTPRJQ12913 1337 aa16.83■□□□□ 0.28
LDLR-204ENST00000545707 PI4K2BG5E9Z4 385 aa16.82■□□□□ 0.28
LDLR-204ENST00000545707 BRAFP15056 766 aa16.82■□□□□ 0.28
LDLR-204ENST00000545707 NF2P35240 595 aa16.82■□□□□ 0.28
LDLR-204ENST00000545707 NSFP46459 744 aaKnown RBP16.82■□□□□ 0.28
LDLR-204ENST00000545707 JAK3P52333 1124 aa16.82■□□□□ 0.28
LDLR-204ENST00000545707 SLCO2A1Q92959 643 aa16.82■□□□□ 0.28
LDLR-204ENST00000545707 SERPINB12Q96P63 405 aa16.82■□□□□ 0.28
LDLR-204ENST00000545707 MOV10L1Q9BXT6 1211 aaKnown RBP16.82■□□□□ 0.28
LDLR-204ENST00000545707 PGAP2Q9UHJ9 254 aa16.82■□□□□ 0.28
LDLR-204ENST00000545707 ZNFX1Q9P2E3 1918 aaKnown RBP16.82■□□□□ 0.28
LDLR-204ENST00000545707 MGRN1O60291 552 aa16.82■□□□□ 0.28
LDLR-204ENST00000545707 GAS8O95995 478 aa16.82■□□□□ 0.28
LDLR-204ENST00000545707 GSCP56915 257 aaPredicted RBP16.82■□□□□ 0.28
LDLR-204ENST00000545707 GCNT1Q02742 428 aa16.82■□□□□ 0.28
LDLR-204ENST00000545707 SRRM1Q8IYB3 904 aaKnown RBP16.82■□□□□ 0.28
LDLR-204ENST00000545707 SUPT20HQ8NEM7 779 aa16.82■□□□□ 0.28
LDLR-204ENST00000545707 ATL2Q8NHH9 583 aa16.82■□□□□ 0.28
LDLR-204ENST00000545707 ZBTB45Q96K62 511 aaPredicted RBP16.82■□□□□ 0.28
LDLR-204ENST00000545707 TIPINQ9BVW5 301 aa16.82■□□□□ 0.28
LDLR-204ENST00000545707 XPNPEP1Q9NQW7 623 aa16.82■□□□□ 0.28
LDLR-204ENST00000545707 CTDP1Q9Y5B0 961 aaPredicted RBP16.82■□□□□ 0.28
LDLR-204ENST00000545707 PCDHA10Q9Y5I2 948 aa16.82■□□□□ 0.28
LDLR-204ENST00000545707 LOC102724159A0A0B4J2E5 919 aa16.81■□□□□ 0.28
LDLR-204ENST00000545707 WNT10BO00744 389 aa16.81■□□□□ 0.28
LDLR-204ENST00000545707 PLSCR1O15162 318 aa16.81■□□□□ 0.28
LDLR-204ENST00000545707 HLA-DRAP01903 254 aa16.81■□□□□ 0.28
LDLR-204ENST00000545707 TCF4P15884 667 aa16.81■□□□□ 0.28
LDLR-204ENST00000545707 NLRP11P59045 1033 aaKnown RBP16.81■□□□□ 0.28
LDLR-204ENST00000545707 KCNJ2P63252 427 aa16.81■□□□□ 0.28
LDLR-204ENST00000545707 KRT76Q01546 638 aa16.81■□□□□ 0.28
LDLR-204ENST00000545707 PWP2Q15269 919 aaKnown RBP16.81■□□□□ 0.28
LDLR-204ENST00000545707 KAZNQ674X7 775 aa16.81■□□□□ 0.28
LDLR-204ENST00000545707 CYP4F22Q6NT55 531 aa16.81■□□□□ 0.28
LDLR-204ENST00000545707 NLRX1Q86UT6 975 aa16.81■□□□□ 0.28
LDLR-204ENST00000545707 GLIS1Q8NBF1 620 aa16.81■□□□□ 0.28
LDLR-204ENST00000545707 NSRP1Q9H0G5 558 aaKnown RBP16.81■□□□□ 0.28
LDLR-204ENST00000545707 A1CFQ9NQ94 594 aaKnown RBP16.81■□□□□ 0.28
LDLR-204ENST00000545707 SEPT9Q9UHD8 586 aaPredicted RBP16.81■□□□□ 0.28
LDLR-204ENST00000545707 NAALADL1Q9UQQ1 740 aa16.81■□□□□ 0.28
LDLR-204ENST00000545707 USP15Q9Y4E8 981 aaPredicted RBP16.81■□□□□ 0.28
LDLR-204ENST00000545707 PCDHB2Q9Y5E7 798 aa16.81■□□□□ 0.28
LDLR-204ENST00000545707 BRWD3Q6RI45 1802 aa16.81■□□□□ 0.28
LDLR-204ENST00000545707 UMODL1Q5DID0 1318 aa16.81■□□□□ 0.28
LDLR-204ENST00000545707 WDR46O15213 610 aaKnown RBP16.81■□□□□ 0.28
LDLR-204ENST00000545707 FDX1P10109 184 aa16.81■□□□□ 0.28
LDLR-204ENST00000545707 KRT10P13645 584 aa16.81■□□□□ 0.28
LDLR-204ENST00000545707 MTMR2Q13614 643 aa16.81■□□□□ 0.28
LDLR-204ENST00000545707 SEZ6Q53EL9 994 aa16.81■□□□□ 0.28
LDLR-204ENST00000545707 ZBTB41Q5SVQ8 909 aa16.81■□□□□ 0.28
LDLR-204ENST00000545707 TDRD10Q5VZ19 366 aaKnown RBP16.81■□□□□ 0.28
LDLR-204ENST00000545707 NTPCRQ9BSD7 190 aaKnown RBP16.81■□□□□ 0.28
LDLR-204ENST00000545707 TRAIPQ9BWF2 469 aa16.81■□□□□ 0.28
LDLR-204ENST00000545707 ADAM33Q9BZ11 813 aa16.81■□□□□ 0.28
LDLR-204ENST00000545707 YY1AP1Q9H869 796 aa16.81■□□□□ 0.28
LDLR-204ENST00000545707 PNMA3Q9UL41 463 aa16.81■□□□□ 0.28
LDLR-204ENST00000545707 PROSCO94903 275 aa16.8■□□□□ 0.28
LDLR-204ENST00000545707 STBD1O95210 358 aa16.8■□□□□ 0.28
LDLR-204ENST00000545707 ATP6V1G2O95670 118 aa16.8■□□□□ 0.28
LDLR-204ENST00000545707 SFNP31947 248 aa16.8■□□□□ 0.28
LDLR-204ENST00000545707 IRX3P78415 501 aaPredicted RBP16.8■□□□□ 0.28
LDLR-204ENST00000545707 KLF1Q13351 362 aaPredicted RBP16.8■□□□□ 0.28
LDLR-204ENST00000545707 PREPLQ4J6C6 727 aaPredicted RBP16.8■□□□□ 0.28
LDLR-204ENST00000545707 IZUMO3Q5VZ72 239 aa16.8■□□□□ 0.28
LDLR-204ENST00000545707 TMEM270Q6UE05 265 aa16.8■□□□□ 0.28
LDLR-204ENST00000545707 ZNF365Q70YC5 407 aa16.8■□□□□ 0.28
LDLR-204ENST00000545707 KIF2BQ8N4N8 673 aa16.8■□□□□ 0.28
LDLR-204ENST00000545707 ATG4CQ96DT6 458 aa16.8■□□□□ 0.28
LDLR-204ENST00000545707 THOC1Q96FV9 657 aaKnown RBP16.8■□□□□ 0.28
LDLR-204ENST00000545707 APOBEC3GQ9HC16 384 aaKnown RBP16.8■□□□□ 0.28
LDLR-204ENST00000545707 NOD2Q9HC29 1040 aa16.8■□□□□ 0.28
LDLR-204ENST00000545707 SBDSQ9Y3A5 250 aaKnown RBP eCLIP16.8■□□□□ 0.28
LDLR-204ENST00000545707 COL4A5P29400 1685 aa16.8■□□□□ 0.28
LDLR-204ENST00000545707 EGFRP00533 1210 aa16.8■□□□□ 0.28
LDLR-204ENST00000545707 OAS1P00973 400 aaKnown RBP16.8■□□□□ 0.28
LDLR-204ENST00000545707 ZSCAN5DPP0CG00 497 aa16.8■□□□□ 0.28
LDLR-204ENST00000545707 PIK3CAP42336 1068 aa16.8■□□□□ 0.28
LDLR-204ENST00000545707 MCCD1P59942 119 aaPredicted RBP16.8■□□□□ 0.28
LDLR-204ENST00000545707 ZFYVE27Q5T4F4 411 aa16.8■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms