RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 MPP3Q13368 585 aa6.4□□□□□ -1.38
SNHG1-224ENST00000545688 NOMO2Q5JPE7 1267 aa6.4□□□□□ -1.38
SNHG1-224ENST00000545688 PGM2L1Q6PCE3 622 aa6.4□□□□□ -1.38
SNHG1-224ENST00000545688 ABCF1Q8NE71 845 aaKnown RBP eCLIP6.4□□□□□ -1.386e-32■□□□□ 8.9
SNHG1-224ENST00000545688 NACC2Q96BF6 587 aa6.4□□□□□ -1.38
SNHG1-224ENST00000545688 MARS2Q96GW9 593 aaKnown RBP6.4□□□□□ -1.38
SNHG1-224ENST00000545688 BOD1Q96IK1 185 aa6.4□□□□□ -1.38
SNHG1-224ENST00000545688 PRDM13Q9H4Q3 707 aa6.4□□□□□ -1.38
SNHG1-224ENST00000545688 GSTO2Q9H4Y5 243 aa6.4□□□□□ -1.38
SNHG1-224ENST00000545688 SPC25Q9HBM1 224 aa6.4□□□□□ -1.38
SNHG1-224ENST00000545688 TMEM74BQ9NUR3 256 aa6.4□□□□□ -1.38
SNHG1-224ENST00000545688 KCNE5Q9UJ90 142 aa6.4□□□□□ -1.38
SNHG1-224ENST00000545688 TUBD1Q9UJT1 453 aa6.4□□□□□ -1.38
SNHG1-224ENST00000545688 ATP8A1Q9Y2Q0 1164 aa6.4□□□□□ -1.38
SNHG1-224ENST00000545688 KAT6AQ92794 2004 aa6.39□□□□□ -1.39
SNHG1-224ENST00000545688 CDHR4A6H8M9 788 aa6.39□□□□□ -1.39
SNHG1-224ENST00000545688 KIAA0391O15091 583 aaKnown RBP6.39□□□□□ -1.39
SNHG1-224ENST00000545688 ESRRBO95718 433 aa6.39□□□□□ -1.39
SNHG1-224ENST00000545688 MT-CO1P00395 513 aa6.39□□□□□ -1.39
SNHG1-224ENST00000545688 CKBP12277 381 aa6.39□□□□□ -1.39
SNHG1-224ENST00000545688 MPLP40238 635 aa6.39□□□□□ -1.39
SNHG1-224ENST00000545688 WASP42768 502 aa6.39□□□□□ -1.39
SNHG1-224ENST00000545688 STRIP1Q5VSL9 837 aa6.39□□□□□ -1.39
SNHG1-224ENST00000545688 FOXR2Q6PJQ5 311 aa6.39□□□□□ -1.39
SNHG1-224ENST00000545688 ADGRG3Q86Y34 549 aa6.39□□□□□ -1.39
SNHG1-224ENST00000545688 FITM2Q8N6M3 262 aa6.39□□□□□ -1.39
SNHG1-224ENST00000545688 C1orf162Q8NEQ5 155 aaPredicted RBP6.39□□□□□ -1.39
SNHG1-224ENST00000545688 SSH1Q8WYL5 1049 aa6.39□□□□□ -1.39
SNHG1-224ENST00000545688 JADE3Q92613 823 aa6.39□□□□□ -1.39
SNHG1-224ENST00000545688 FUBP1Q96AE4 644 aaKnown RBP6.39□□□□□ -1.39
SNHG1-224ENST00000545688 Q96MF0 132 aa6.39□□□□□ -1.39
SNHG1-224ENST00000545688 GALNT9Q9HCQ5 603 aa6.39□□□□□ -1.39
SNHG1-224ENST00000545688 HSFX1Q9UBD0 423 aa6.39□□□□□ -1.39
SNHG1-224ENST00000545688 MAST3O60307 1309 aa6.39□□□□□ -1.39
SNHG1-224ENST00000545688 COL11A2P13942 1736 aaPredicted RBP6.39□□□□□ -1.39
SNHG1-224ENST00000545688 NDUFS2O75306 463 aa6.38□□□□□ -1.39
SNHG1-224ENST00000545688 ZFPL1O95159 310 aa6.38□□□□□ -1.39
SNHG1-224ENST00000545688 C5AR1P21730 350 aa6.38□□□□□ -1.39
SNHG1-224ENST00000545688 CTXN1P60606 82 aa6.38□□□□□ -1.39
SNHG1-224ENST00000545688 SLFN5Q08AF3 891 aa6.38□□□□□ -1.39
SNHG1-224ENST00000545688 TARDBPQ13148 414 aaKnown RBP eCLIP6.38□□□□□ -1.39
SNHG1-224ENST00000545688 CYP2A13Q16696 494 aa6.38□□□□□ -1.39
SNHG1-224ENST00000545688 PRR16Q569H4 304 aa6.38□□□□□ -1.39
SNHG1-224ENST00000545688 FAM43AQ8N2R8 423 aa6.38□□□□□ -1.39
SNHG1-224ENST00000545688 DCBLD1Q8N8Z6 715 aa6.38□□□□□ -1.39
SNHG1-224ENST00000545688 BBC3Q96PG8 261 aaPredicted RBP6.38□□□□□ -1.39
SNHG1-224ENST00000545688 C11orf54Q9H0W9 315 aaPredicted RBP6.38□□□□□ -1.39
SNHG1-224ENST00000545688 MKS1Q9NXB0 559 aa6.38□□□□□ -1.39
SNHG1-224ENST00000545688 MTO1Q9Y2Z2 717 aaKnown RBP6.38□□□□□ -1.39
SNHG1-224ENST00000545688 SALL3Q9BXA9 1300 aa6.37□□□□□ -1.39
SNHG1-224ENST00000545688 IGSF3O75054 1194 aa6.37□□□□□ -1.39
SNHG1-224ENST00000545688 CXCR5P32302 372 aa6.37□□□□□ -1.39
SNHG1-224ENST00000545688 CREMQ03060 361 aa6.37□□□□□ -1.39
SNHG1-224ENST00000545688 ACAP2Q15057 778 aa6.37□□□□□ -1.39
SNHG1-224ENST00000545688 DACT2Q5SW24 774 aa6.37□□□□□ -1.39
SNHG1-224ENST00000545688 TBC1D15Q8TC07 691 aa6.37□□□□□ -1.39
SNHG1-224ENST00000545688 NUP133Q8WUM0 1156 aa6.37□□□□□ -1.39
SNHG1-224ENST00000545688 TMX3Q96JJ7 454 aa6.37□□□□□ -1.39
SNHG1-224ENST00000545688 TBCCD1Q9NVR7 557 aa6.37□□□□□ -1.39
SNHG1-224ENST00000545688 SAP30BPQ9UHR5 308 aaKnown RBP6.37□□□□□ -1.39
SNHG1-224ENST00000545688 PCDHA13Q9Y5I0 950 aa6.37□□□□□ -1.39
SNHG1-224ENST00000545688 PCDHGA12O60330 932 aa6.36□□□□□ -1.39
SNHG1-224ENST00000545688 ERN1O75460 977 aaKnown RBP6.36□□□□□ -1.39
SNHG1-224ENST00000545688 SLC6A4P31645 630 aa6.36□□□□□ -1.39
SNHG1-224ENST00000545688 PTH2RP49190 550 aa6.36□□□□□ -1.39
SNHG1-224ENST00000545688 VAV2P52735 878 aa6.36□□□□□ -1.39
SNHG1-224ENST00000545688 GEN1Q17RS7 908 aa6.36□□□□□ -1.39
SNHG1-224ENST00000545688 ABCB5Q2M3G0 1257 aa6.36□□□□□ -1.39
SNHG1-224ENST00000545688 ERCC6LQ2NKX8 1250 aa6.36□□□□□ -1.39
SNHG1-224ENST00000545688 Q6ZNX1 250 aa6.36□□□□□ -1.39
SNHG1-224ENST00000545688 MIGA2Q7L4E1 593 aa6.36□□□□□ -1.39
SNHG1-224ENST00000545688 RSPH3Q86UC2 560 aa6.36□□□□□ -1.39
SNHG1-224ENST00000545688 SIMC1Q8NDZ2 872 aa6.36□□□□□ -1.39
SNHG1-224ENST00000545688 NTN5Q8WTR8 489 aaPredicted RBP6.36□□□□□ -1.39
SNHG1-224ENST00000545688 ZNF764Q96H86 408 aaPredicted RBP6.36□□□□□ -1.39
SNHG1-224ENST00000545688 FAXDC2Q96IV6 333 aa6.36□□□□□ -1.39
SNHG1-224ENST00000545688 PNKPQ96T60 521 aa6.36□□□□□ -1.39
SNHG1-224ENST00000545688 R3HDMLQ9H3Y0 253 aa6.36□□□□□ -1.39
SNHG1-224ENST00000545688 UNKLQ9H9P5 680 aaKnown RBP6.36□□□□□ -1.39
SNHG1-224ENST00000545688 ALG13Q9NP73 1137 aaKnown RBP6.36□□□□□ -1.39
SNHG1-224ENST00000545688 CASS4Q9NQ75 786 aa6.36□□□□□ -1.39
SNHG1-224ENST00000545688 PTGFRNQ9P2B2 879 aa6.36□□□□□ -1.39
SNHG1-224ENST00000545688 TRHDEQ9UKU6 1024 aa6.36□□□□□ -1.39
SNHG1-224ENST00000545688 PCDHGA9Q9Y5G4 932 aaKnown RBP6.36□□□□□ -1.39
SNHG1-224ENST00000545688 PCDHGA8Q9Y5G5 932 aa6.36□□□□□ -1.39
SNHG1-224ENST00000545688 PCDHGA7Q9Y5G6 932 aa6.36□□□□□ -1.39
SNHG1-224ENST00000545688 PCDHGA6Q9Y5G7 932 aa6.36□□□□□ -1.39
SNHG1-224ENST00000545688 PCDHGA3Q9Y5H0 932 aa6.36□□□□□ -1.39
SNHG1-224ENST00000545688 MYBL2P10244 700 aa6.35□□□□□ -1.39
SNHG1-224ENST00000545688 FCER1AP12319 257 aa6.35□□□□□ -1.39
SNHG1-224ENST00000545688 FBLP22087 321 aaKnown RBP6.35□□□□□ -1.39
SNHG1-224ENST00000545688 CDC42EP1Q00587 391 aa6.35□□□□□ -1.39
SNHG1-224ENST00000545688 ATP2B3Q16720 1220 aa6.35□□□□□ -1.39
SNHG1-224ENST00000545688 SYDE2Q5VT97 1194 aa6.35□□□□□ -1.39
SNHG1-224ENST00000545688 IFI44Q8TCB0 444 aa6.35□□□□□ -1.39
SNHG1-224ENST00000545688 TDP1Q9NUW8 608 aa6.35□□□□□ -1.39
SNHG1-224ENST00000545688 SBNO2Q9Y2G9 1366 aa6.34□□□□□ -1.39
SNHG1-224ENST00000545688 GRM6O15303 877 aa6.34□□□□□ -1.39
SNHG1-224ENST00000545688 XPOTO43592 962 aaKnown RBP6.34□□□□□ -1.39
SNHG1-224ENST00000545688 HAUS5O94927 633 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms