RNA–Protein interactions for RNA: ENST00000544910.5

VPS50-220, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2 BASIC

Gene VPS50, Length 5,736 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-220ENST00000544910 LMNAP02545 664 aaKnown RBP6.14□□□□□ -1.43
VPS50-220ENST00000544910 CYP11B1P15538 503 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 RPS12P25398 132 aaKnown RBP6.14□□□□□ -1.43
VPS50-220ENST00000544910 CNGA1P29973 690 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 ACOT2P49753 483 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 PTENP60484 403 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 STAT4Q14765 748 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 KIF22Q14807 665 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 TAF11Q15544 211 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 LONRF1Q17RB8 773 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 ZNF394Q53GI3 561 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 TTMPQ5BVD1 217 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 ARSHQ5FYA8 562 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 ZNF354CQ86Y25 554 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 RHPN2Q8IUC4 686 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 TRIM42Q8IWZ5 723 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 TMC2Q8TDI7 906 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 CALN1Q9BXU9 219 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 GPRC5CQ9NQ84 441 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 PCDHAC2Q9Y5I4 1007 aa6.14□□□□□ -1.43
VPS50-220ENST00000544910 NFIBO00712 420 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 ZC3H11AO75152 810 aaKnown RBP eCLIP6.13□□□□□ -1.43
VPS50-220ENST00000544910 OATP04181 439 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 DPEP1P16444 411 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 PHKA2P46019 1235 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 LAMB2P55268 1798 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 CYP24A1Q07973 514 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 GPS1Q13098 491 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 CBWD6Q4V339 395 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 CBWD3Q5JTY5 395 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 CBWD5Q5RIA9 395 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 BTNL9Q6UXG8 535 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 CBWD2Q8IUF1 395 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 PARP9Q8IXQ6 854 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 THNSL1Q8IYQ7 743 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 TSEN2Q8NCE0 465 aaKnown RBP6.13□□□□□ -1.43
VPS50-220ENST00000544910 PSPC1Q8WXF1 523 aaKnown RBP6.13□□□□□ -1.43
VPS50-220ENST00000544910 PPP1R16BQ96T49 567 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 CENPKQ9BS16 269 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 PI4K2AQ9BTU6 479 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 FGFBP2Q9BYJ0 223 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 ECT2Q9H8V3 914 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 SLC5A4Q9NY91 659 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 A0A1B0GUL6 1792 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 M0QYV0 167 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 NPM3O75607 178 aaKnown RBP6.13□□□□□ -1.43
VPS50-220ENST00000544910 MT-ND3P03897 115 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 PRKCBP05771 671 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 MYBL2P10244 700 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 GZMAP12544 262 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 NPTX2P47972 431 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 CCNA1P78396 465 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 E2F5Q15329 346 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 SLC15A2Q16348 729 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 CLEC16AQ2KHT3 1053 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 P3H1Q32P28 736 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 SPDYCQ5MJ68 293 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 SLC47A2Q86VL8 602 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 SESTD1Q86VW0 696 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 SCYL3Q8IZE3 742 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 ARHGAP18Q8N392 663 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 LNX1Q8TBB1 728 aaPredicted RBP6.13□□□□□ -1.43
VPS50-220ENST00000544910 TEX13BQ9BXU2 312 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 BATF3Q9NR55 127 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 KLHL11Q9NVR0 708 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 CHORDC1Q9UHD1 332 aaPredicted RBP6.13□□□□□ -1.43
VPS50-220ENST00000544910 PCDHB2Q9Y5E7 798 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 DOCK2Q92608 1830 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 MYH2Q9UKX2 1941 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 MAPK13O15264 365 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 DCTN3O75935 186 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 KRT7P08729 469 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 GARSP41250 739 aaKnown RBP6.13□□□□□ -1.43
VPS50-220ENST00000544910 ARSEP51690 589 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 ERVK-9P63128 1117 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 SKOR1P84550 965 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 LRRC14Q15048 493 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 NFIL3Q16649 462 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 CD302Q8IX05 232 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 HOMEZQ8IX15 550 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 SRRM1Q8IYB3 904 aaKnown RBP6.13□□□□□ -1.43
VPS50-220ENST00000544910 AFAP1L2Q8N4X5 818 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 FAF2Q96CS3 445 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 KLHL29Q96CT2 875 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 ATG4CQ96DT6 458 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 MMP19Q99542 508 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 PITPNM3Q9BZ71 974 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 ZNF408Q9H9D4 720 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 GEMIN8Q9NWZ8 242 aaKnown RBP6.13□□□□□ -1.43
VPS50-220ENST00000544910 FAM53CQ9NYF3 392 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 WHRNQ9P202 907 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 ZSCAN5CA6NGD5 496 aaPredicted RBP6.13□□□□□ -1.43
VPS50-220ENST00000544910 M0QZ92 97 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 ZNF263O14978 683 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 RPS6KA5O75582 802 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 NOL4O94818 638 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 BRAFP15056 766 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 GARTP22102 1010 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 ITGA8P53708 1063 aa6.13□□□□□ -1.43
VPS50-220ENST00000544910 CUL2Q13617 745 aa6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms