RNA–Protein interactions for RNA: ENST00000544293.1

C2CD3-220, Transcript of C2 calcium dependent domain containing 3, humanhuman

TSL 2

Gene C2CD3, Length 731 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2CD3-220ENST00000544293 GMEB2Q9UKD1 530 aa10.48□□□□□ -0.73
C2CD3-220ENST00000544293 CHURC1-FNTBB4DL54 471 aa10.47□□□□□ -0.73
C2CD3-220ENST00000544293 MAN2B1O00754 1011 aa10.47□□□□□ -0.73
C2CD3-220ENST00000544293 CDC45O75419 566 aa10.47□□□□□ -0.73
C2CD3-220ENST00000544293 B3GAT3O94766 335 aa10.47□□□□□ -0.73
C2CD3-220ENST00000544293 MICAL2O94851 1124 aa10.47□□□□□ -0.73
C2CD3-220ENST00000544293 VNN2O95498 520 aa10.47□□□□□ -0.73
C2CD3-220ENST00000544293 FDPSP14324 419 aaKnown RBP10.47□□□□□ -0.73
C2CD3-220ENST00000544293 GJA1P17302 382 aa10.47□□□□□ -0.73
C2CD3-220ENST00000544293 FNTBP49356 437 aa10.47□□□□□ -0.73
C2CD3-220ENST00000544293 RBM25P49756 843 aaKnown RBP10.47□□□□□ -0.73
C2CD3-220ENST00000544293 SCRN1Q12765 414 aa10.47□□□□□ -0.73
C2CD3-220ENST00000544293 ELAVL2Q12926 359 aaKnown RBP10.47□□□□□ -0.73
C2CD3-220ENST00000544293 NR5A1Q13285 461 aa10.47□□□□□ -0.73
C2CD3-220ENST00000544293 XKR4Q5GH76 650 aa10.47□□□□□ -0.73
C2CD3-220ENST00000544293 NT5DC1Q5TFE4 455 aa10.47□□□□□ -0.73
C2CD3-220ENST00000544293 TXNDC11Q6PKC3 985 aa10.47□□□□□ -0.73
C2CD3-220ENST00000544293 ALKAL1Q6UXT8 129 aa10.47□□□□□ -0.73
C2CD3-220ENST00000544293 RUFY3Q7L099 469 aa10.47□□□□□ -0.73
C2CD3-220ENST00000544293 TRIM22Q8IYM9 498 aa10.47□□□□□ -0.73
C2CD3-220ENST00000544293 HACE1Q8IYU2 909 aa10.47□□□□□ -0.73
C2CD3-220ENST00000544293 FAM177A1Q8N128 213 aaPredicted RBP10.47□□□□□ -0.73
C2CD3-220ENST00000544293 TMEM130Q8N3G9 435 aa10.47□□□□□ -0.73
C2CD3-220ENST00000544293 PRIMPOLQ96LW4 560 aa10.47□□□□□ -0.73
C2CD3-220ENST00000544293 TRMT61BQ9BVS5 477 aaKnown RBP10.47□□□□□ -0.73
C2CD3-220ENST00000544293 LRRC3Q9BY71 257 aa10.47□□□□□ -0.73
C2CD3-220ENST00000544293 ZFP14Q9HCL3 533 aa10.47□□□□□ -0.73
C2CD3-220ENST00000544293 RBM12Q9NTZ6 932 aaKnown RBP10.47□□□□□ -0.73
C2CD3-220ENST00000544293 PRMT7Q9NVM4 692 aaPredicted RBP10.47□□□□□ -0.73
C2CD3-220ENST00000544293 MRPS17Q9Y2R5 130 aaKnown RBP10.47□□□□□ -0.73
C2CD3-220ENST00000544293 WDR81Q562E7 1941 aa10.46□□□□□ -0.73
C2CD3-220ENST00000544293 CNOT1A5YKK6 2376 aaKnown RBP10.46□□□□□ -0.73
C2CD3-220ENST00000544293 SMIM28A0A1B0GU29 152 aa10.46□□□□□ -0.73
C2CD3-220ENST00000544293 CCDC194A0A1B0GVG4 234 aa10.46□□□□□ -0.73
C2CD3-220ENST00000544293 ACKR2O00590 384 aa10.46□□□□□ -0.73
C2CD3-220ENST00000544293 USO1O60763 962 aaKnown RBP10.46□□□□□ -0.73
C2CD3-220ENST00000544293 LRP3O75074 770 aa10.46□□□□□ -0.73
C2CD3-220ENST00000544293 PAPSS2O95340 614 aaPredicted RBP10.46□□□□□ -0.73
C2CD3-220ENST00000544293 XRCC6P12956 609 aaKnown RBP eCLIP10.46□□□□□ -0.73
C2CD3-220ENST00000544293 HOXB3P14651 431 aaPredicted RBP10.46□□□□□ -0.73
C2CD3-220ENST00000544293 ATF2P15336 505 aa10.46□□□□□ -0.73
C2CD3-220ENST00000544293 PSMC3P17980 439 aa10.46□□□□□ -0.73
C2CD3-220ENST00000544293 CCNE1P24864 410 aa10.46□□□□□ -0.73
C2CD3-220ENST00000544293 GDI1P31150 447 aa10.46□□□□□ -0.73
C2CD3-220ENST00000544293 CXCL12P48061 93 aa10.46□□□□□ -0.73
C2CD3-220ENST00000544293 STK3Q13188 491 aa10.46□□□□□ -0.73
C2CD3-220ENST00000544293 SIM2Q14190 667 aaPredicted RBP10.46□□□□□ -0.73
C2CD3-220ENST00000544293 PDXDC1Q6P996 788 aa10.46□□□□□ -0.73
C2CD3-220ENST00000544293 PRR23BQ6ZRT6 265 aa10.46□□□□□ -0.73
C2CD3-220ENST00000544293 Q6ZS52 159 aa10.46□□□□□ -0.73
C2CD3-220ENST00000544293 TCEAL8Q8IYN2 117 aa10.46□□□□□ -0.73
C2CD3-220ENST00000544293 CEP120Q8N960 986 aa10.46□□□□□ -0.73
C2CD3-220ENST00000544293 ZMAT2Q96NC0 199 aaKnown RBP10.46□□□□□ -0.73
C2CD3-220ENST00000544293 CORO1BQ9BR76 489 aa10.46□□□□□ -0.73
C2CD3-220ENST00000544293 BRD9Q9H8M2 597 aa10.46□□□□□ -0.73
C2CD3-220ENST00000544293 TRPV4Q9HBA0 871 aa10.46□□□□□ -0.73
C2CD3-220ENST00000544293 PCDHA12Q9UN75 941 aa10.46□□□□□ -0.73
C2CD3-220ENST00000544293 GDAQ9Y2T3 454 aa10.46□□□□□ -0.73
C2CD3-220ENST00000544293 PIAS3Q9Y6X2 628 aa10.46□□□□□ -0.73
C2CD3-220ENST00000544293 LRRIQ4A6NIV6 560 aa10.45□□□□□ -0.74
C2CD3-220ENST00000544293 MED24O75448 989 aa10.45□□□□□ -0.74
C2CD3-220ENST00000544293 CD44P16070 742 aaKnown RBP10.45□□□□□ -0.74
C2CD3-220ENST00000544293 SOX9P48436 509 aa10.45□□□□□ -0.74
C2CD3-220ENST00000544293 CCR3P51677 355 aa10.45□□□□□ -0.74
C2CD3-220ENST00000544293 EPHA5P54756 1037 aa10.45□□□□□ -0.74
C2CD3-220ENST00000544293 NRLP54845 237 aa10.45□□□□□ -0.74
C2CD3-220ENST00000544293 MLLT6P55198 1093 aaPredicted RBP10.45□□□□□ -0.74
C2CD3-220ENST00000544293 SHC2P98077 582 aa10.45□□□□□ -0.74
C2CD3-220ENST00000544293 PTGDRQ13258 359 aa10.45□□□□□ -0.74
C2CD3-220ENST00000544293 ANKS3Q6ZW76 656 aa10.45□□□□□ -0.74
C2CD3-220ENST00000544293 CATSPER3Q86XQ3 398 aa10.45□□□□□ -0.74
C2CD3-220ENST00000544293 SLFN12Q8IYM2 578 aa10.45□□□□□ -0.74
C2CD3-220ENST00000544293 SPEM1Q8N4L4 309 aa10.45□□□□□ -0.74
C2CD3-220ENST00000544293 FAM160A2Q8N612 972 aaPredicted RBP10.45□□□□□ -0.74
C2CD3-220ENST00000544293 SMARCD2Q92925 531 aa10.45□□□□□ -0.74
C2CD3-220ENST00000544293 IRF7Q92985 503 aa10.45□□□□□ -0.74
C2CD3-220ENST00000544293 MKNK1Q9BUB5 465 aa10.45□□□□□ -0.74
C2CD3-220ENST00000544293 KIFC3Q9BVG8 833 aa10.45□□□□□ -0.74
C2CD3-220ENST00000544293 TMEM60Q9H2L4 133 aa10.45□□□□□ -0.74
C2CD3-220ENST00000544293 TTC12Q9H892 705 aaPredicted RBP10.45□□□□□ -0.74
C2CD3-220ENST00000544293 PTPRHQ9HD43 1115 aa10.45□□□□□ -0.74
C2CD3-220ENST00000544293 FBXL5Q9UKA1 691 aa10.45□□□□□ -0.74
C2CD3-220ENST00000544293 HEPACAM2A8MVW5 462 aa10.44□□□□□ -0.74
C2CD3-220ENST00000544293 N4BP3O15049 544 aa10.44□□□□□ -0.74
C2CD3-220ENST00000544293 PYGBP11216 843 aa10.44□□□□□ -0.74
C2CD3-220ENST00000544293 PSMA5P28066 241 aa10.44□□□□□ -0.74
C2CD3-220ENST00000544293 PRPF4BQ13523 1007 aaKnown RBP10.44□□□□□ -0.74
C2CD3-220ENST00000544293 SF3A2Q15428 464 aaKnown RBP10.44□□□□□ -0.74
C2CD3-220ENST00000544293 ECM1Q16610 540 aa10.44□□□□□ -0.74
C2CD3-220ENST00000544293 LONP2Q86WA8 852 aa10.44□□□□□ -0.74
C2CD3-220ENST00000544293 GPIHBP1Q8IV16 184 aa10.44□□□□□ -0.74
C2CD3-220ENST00000544293 MFSD6LQ8IWD5 586 aa10.44□□□□□ -0.74
C2CD3-220ENST00000544293 SHKBP1Q8TBC3 707 aa10.44□□□□□ -0.74
C2CD3-220ENST00000544293 CHAMP1Q96JM3 812 aa10.44□□□□□ -0.74
C2CD3-220ENST00000544293 IER2Q9BTL4 223 aa10.44□□□□□ -0.74
C2CD3-220ENST00000544293 CRISPLD1Q9H336 500 aa10.44□□□□□ -0.74
C2CD3-220ENST00000544293 CYP4F11Q9HBI6 524 aa10.44□□□□□ -0.74
C2CD3-220ENST00000544293 INSL5Q9Y5Q6 135 aa10.44□□□□□ -0.74
C2CD3-220ENST00000544293 MTCL1Q9Y4B5 1905 aaKnown RBP10.44□□□□□ -0.74
C2CD3-220ENST00000544293 ABLIM1O14639 778 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms