RNA–Protein interactions for RNA: ENST00000543633.5

VPS33A-208, Transcript of VPS33A, CORVET/HOPS core subunit, humanhuman

TSL 5

Gene VPS33A, Length 2,019 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33A-208ENST00000543633 TXLNGQ9NUQ3 528 aa14.61□□□□□ -0.07
VPS33A-208ENST00000543633 MAP3K20Q9NYL2 800 aaKnown RBP14.61□□□□□ -0.07
VPS33A-208ENST00000543633 CEP83Q9Y592 693 aa14.61□□□□□ -0.07
VPS33A-208ENST00000543633 ARID2Q68CP9 1835 aa14.61□□□□□ -0.07
VPS33A-208ENST00000543633 NFASCO94856 1347 aa14.61□□□□□ -0.07
VPS33A-208ENST00000543633 MROH7Q68CQ1 1323 aa14.61□□□□□ -0.07
VPS33A-208ENST00000543633 PROSCO94903 275 aa14.61□□□□□ -0.07
VPS33A-208ENST00000543633 ABCD1P33897 745 aa14.61□□□□□ -0.07
VPS33A-208ENST00000543633 ECE1P42892 770 aa14.61□□□□□ -0.07
VPS33A-208ENST00000543633 IL9RQ01113 521 aa14.61□□□□□ -0.07
VPS33A-208ENST00000543633 LRRC14Q15048 493 aa14.61□□□□□ -0.07
VPS33A-208ENST00000543633 SPDYAQ5MJ70 313 aa14.61□□□□□ -0.07
VPS33A-208ENST00000543633 PCNX4Q63HM2 1172 aa14.61□□□□□ -0.07
VPS33A-208ENST00000543633 CHADLQ6NUI6 762 aa14.61□□□□□ -0.07
VPS33A-208ENST00000543633 TRIM72Q6ZMU5 477 aa14.61□□□□□ -0.07
VPS33A-208ENST00000543633 OTUD6AQ7L8S5 288 aa14.61□□□□□ -0.07
VPS33A-208ENST00000543633 CBWD2Q8IUF1 395 aa14.61□□□□□ -0.07
VPS33A-208ENST00000543633 KATNAL2Q8IYT4 538 aa14.61□□□□□ -0.07
VPS33A-208ENST00000543633 TTLL6Q8N841 843 aa14.61□□□□□ -0.07
VPS33A-208ENST00000543633 AGAP11Q8TF27 550 aa14.61□□□□□ -0.07
VPS33A-208ENST00000543633 SPIRE2Q8WWL2 714 aa14.61□□□□□ -0.07
VPS33A-208ENST00000543633 TTC25Q96NG3 672 aa14.61□□□□□ -0.07
VPS33A-208ENST00000543633 KCNK9Q9NPC2 374 aa14.61□□□□□ -0.07
VPS33A-208ENST00000543633 TMOD2Q9NZR1 351 aa14.61□□□□□ -0.07
VPS33A-208ENST00000543633 SENP1Q9P0U3 644 aa14.61□□□□□ -0.07
VPS33A-208ENST00000543633 ZNF219Q9P2Y4 722 aaPredicted RBP14.61□□□□□ -0.07
VPS33A-208ENST00000543633 ZBTB21Q9ULJ3 1066 aa14.61□□□□□ -0.07
VPS33A-208ENST00000543633 TBX20Q9UMR3 447 aa14.61□□□□□ -0.07
VPS33A-208ENST00000543633 SUFUQ9UMX1 484 aa14.61□□□□□ -0.07
VPS33A-208ENST00000543633 YWHABP31946 246 aaKnown RBP14.6□□□□□ -0.07
VPS33A-208ENST00000543633 CCNG1P51959 295 aa14.6□□□□□ -0.07
VPS33A-208ENST00000543633 JAK3P52333 1124 aa14.6□□□□□ -0.07
VPS33A-208ENST00000543633 KCNJ2P63252 427 aa14.6□□□□□ -0.07
VPS33A-208ENST00000543633 CYP24A1Q07973 514 aa14.6□□□□□ -0.07
VPS33A-208ENST00000543633 RASA2Q15283 850 aa14.6□□□□□ -0.07
VPS33A-208ENST00000543633 KYNUQ16719 465 aa14.6□□□□□ -0.07
VPS33A-208ENST00000543633 TKFCQ3LXA3 575 aa14.6□□□□□ -0.07
VPS33A-208ENST00000543633 NSMFQ6X4W1 530 aa14.6□□□□□ -0.07
VPS33A-208ENST00000543633 ZNF365Q70YC5 407 aa14.6□□□□□ -0.07
VPS33A-208ENST00000543633 MCF2L2Q86YR7 1114 aa14.6□□□□□ -0.07
VPS33A-208ENST00000543633 ZCCHC9Q8N567 271 aaKnown RBP14.6□□□□□ -0.07
VPS33A-208ENST00000543633 ANKRD42Q8N9B4 389 aa14.6□□□□□ -0.07
VPS33A-208ENST00000543633 TMEM161BQ8NDZ6 487 aa14.6□□□□□ -0.07
VPS33A-208ENST00000543633 RDM1Q8NG50 284 aa14.6□□□□□ -0.07
VPS33A-208ENST00000543633 MGARPQ8TDB4 240 aa14.6□□□□□ -0.07
VPS33A-208ENST00000543633 STAMBPL1Q96FJ0 436 aa14.6□□□□□ -0.07
VPS33A-208ENST00000543633 POP1Q99575 1024 aaKnown RBP14.6□□□□□ -0.07
VPS33A-208ENST00000543633 TDRD3Q9H7E2 651 aaKnown RBP14.6□□□□□ -0.07
VPS33A-208ENST00000543633 CHORDC1Q9UHD1 332 aaPredicted RBP14.6□□□□□ -0.07
VPS33A-208ENST00000543633 STARD13Q9Y3M8 1113 aa14.6□□□□□ -0.07
VPS33A-208ENST00000543633 PCDHB2Q9Y5E7 798 aa14.6□□□□□ -0.07
VPS33A-208ENST00000543633 ASTN2O75129 1339 aaPredicted RBP14.6□□□□□ -0.07
VPS33A-208ENST00000543633 SLC16A4O15374 487 aa14.59□□□□□ -0.07
VPS33A-208ENST00000543633 PRPF4O43172 522 aaKnown RBP eCLIP14.59□□□□□ -0.07
VPS33A-208ENST00000543633 ICAM1P05362 532 aa14.59□□□□□ -0.07
VPS33A-208ENST00000543633 SCP2P22307 547 aa14.59□□□□□ -0.07
VPS33A-208ENST00000543633 ADSSP30520 456 aa14.59□□□□□ -0.07
VPS33A-208ENST00000543633 SFNP31947 248 aa14.59□□□□□ -0.07
VPS33A-208ENST00000543633 ADCY8P40145 1251 aa14.59□□□□□ -0.07
VPS33A-208ENST00000543633 MSH2P43246 934 aa14.59□□□□□ -0.07
VPS33A-208ENST00000543633 PEX3P56589 373 aa14.59□□□□□ -0.07
VPS33A-208ENST00000543633 SNX1Q13596 522 aa14.59□□□□□ -0.07
VPS33A-208ENST00000543633 PARP6Q2NL67 630 aa14.59□□□□□ -0.07
VPS33A-208ENST00000543633 GRIPAP1Q4V328 841 aa14.59□□□□□ -0.07
VPS33A-208ENST00000543633 RHOT1Q8IXI2 618 aa14.59□□□□□ -0.07
VPS33A-208ENST00000543633 ACER1Q8TDN7 264 aa14.59□□□□□ -0.07
VPS33A-208ENST00000543633 TBC1D31Q96DN5 1066 aa14.59□□□□□ -0.07
VPS33A-208ENST00000543633 VCPIP1Q96JH7 1222 aa14.59□□□□□ -0.07
VPS33A-208ENST00000543633 CFAP57Q96MR6 1250 aa14.59□□□□□ -0.07
VPS33A-208ENST00000543633 MYPNQ86TC9 1320 aa14.59□□□□□ -0.07
VPS33A-208ENST00000543633 FAM47DPA6NHR8 397 aa14.59□□□□□ -0.07
VPS33A-208ENST00000543633 UNC5CO95185 931 aa14.59□□□□□ -0.07
VPS33A-208ENST00000543633 ANP32DO95626 131 aa14.59□□□□□ -0.07
VPS33A-208ENST00000543633 CYP1A1P04798 512 aaPredicted RBP14.59□□□□□ -0.07
VPS33A-208ENST00000543633 TAC1P20366 129 aa14.59□□□□□ -0.07
VPS33A-208ENST00000543633 GARTP22102 1010 aa14.59□□□□□ -0.07
VPS33A-208ENST00000543633 TGFB2P61812 414 aa14.59□□□□□ -0.07
VPS33A-208ENST00000543633 PSMC5P62195 406 aa14.59□□□□□ -0.07
VPS33A-208ENST00000543633 ATP11AP98196 1134 aa14.59□□□□□ -0.07
VPS33A-208ENST00000543633 MYO1EQ12965 1108 aa14.59□□□□□ -0.07
VPS33A-208ENST00000543633 LIN9Q5TKA1 542 aa14.59□□□□□ -0.07
VPS33A-208ENST00000543633 CGB2Q6NT52 195 aa14.59□□□□□ -0.07
VPS33A-208ENST00000543633 DRICH1Q6PGQ1 229 aaPredicted RBP14.59□□□□□ -0.07
VPS33A-208ENST00000543633 MAEAQ7L5Y9 396 aa14.59□□□□□ -0.07
VPS33A-208ENST00000543633 FITM2Q8N6M3 262 aa14.59□□□□□ -0.07
VPS33A-208ENST00000543633 ZSWIM2Q8NEG5 633 aa14.59□□□□□ -0.07
VPS33A-208ENST00000543633 EXD1Q8NHP7 514 aa14.59□□□□□ -0.07
VPS33A-208ENST00000543633 GADD45GIP1Q8TAE8 222 aaPredicted RBP14.59□□□□□ -0.07
VPS33A-208ENST00000543633 TAS1R2Q8TE23 839 aa14.59□□□□□ -0.07
VPS33A-208ENST00000543633 NSMCE1Q8WV22 266 aa14.59□□□□□ -0.07
VPS33A-208ENST00000543633 C1orf112Q9NSG2 853 aa14.59□□□□□ -0.07
VPS33A-208ENST00000543633 CTNNAL1Q9UBT7 734 aa14.59□□□□□ -0.07
VPS33A-208ENST00000543633 NAALADL1Q9UQQ1 740 aa14.59□□□□□ -0.07
VPS33A-208ENST00000543633 BCS1LQ9Y276 419 aa14.59□□□□□ -0.07
VPS33A-208ENST00000543633 BRCA1P38398 1863 aaKnown RBP14.59□□□□□ -0.07
VPS33A-208ENST00000543633 UMODL1Q5DID0 1318 aa14.58□□□□□ -0.07
VPS33A-208ENST00000543633 GOLGA8IPA6NC78 632 aa14.58□□□□□ -0.08
VPS33A-208ENST00000543633 GOLGA8JA6NMD2 632 aa14.58□□□□□ -0.08
VPS33A-208ENST00000543633 DDX39AO00148 427 aaKnown RBP14.58□□□□□ -0.08
VPS33A-208ENST00000543633 LIN7AO14910 233 aaPredicted RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms