RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 RTP2Q5QGT7 225 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 FAM171A1Q5VUB5 890 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 CLEC18BQ6UXF7 455 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 USP49Q70CQ1 688 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 PLPPR4Q7Z2D5 763 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 ERICH1Q86X53 443 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 POTEDQ86YR6 584 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 DHX40Q8IX18 779 aaKnown RBP3.7□□□□□ -1.82
CHD4-209ENST00000542717 COLGALT2Q8IYK4 626 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 GPR65Q8IYL9 337 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 RNF168Q8IYW5 571 aaPredicted RBP3.7□□□□□ -1.82
CHD4-209ENST00000542717 IFNL3Q8IZI9 196 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 SAMD3Q8N6K7 520 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 FRMD1Q8N878 549 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 EXD3Q8N9H8 876 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 CLEC18CQ8NCF0 446 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 MDGA1Q8NFP4 955 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 SPATA20Q8TB22 786 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 SLC7A3Q8WY07 619 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 ZNF512Q96ME7 567 aaPredicted RBP3.7□□□□□ -1.82
CHD4-209ENST00000542717 FNBP1Q96RU3 617 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 CLSTN3Q9BQT9 956 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 FZD8Q9H461 694 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 GAREM1Q9H706 876 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 EPB41L4AQ9HCS5 686 aaPredicted RBP3.7□□□□□ -1.82
CHD4-209ENST00000542717 JPH1Q9HDC5 661 aaPredicted RBP3.7□□□□□ -1.82
CHD4-209ENST00000542717 IL1RAPL2Q9NP60 686 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 AVENQ9NQS1 362 aaPredicted RBP3.7□□□□□ -1.82
CHD4-209ENST00000542717 TM7SF3Q9NS93 570 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 STARD5Q9NSY2 213 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 THG1LQ9NWX6 298 aaKnown RBP3.7□□□□□ -1.82
CHD4-209ENST00000542717 SLC9A2Q9UBY0 812 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 SUSD2Q9UGT4 822 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 ADAM28Q9UKQ2 775 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 NOB1Q9ULX3 412 aaKnown RBP3.7□□□□□ -1.82
CHD4-209ENST00000542717 U3KPZ7 1027 aaPredicted RBP3.7□□□□□ -1.82
CHD4-209ENST00000542717 ABCA2Q9BZC7 2435 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 VWA8A3KMH1 1905 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 SF3B1O75533 1304 aaKnown RBP eCLIP3.7□□□□□ -1.82
CHD4-209ENST00000542717 ZMYM6O95789 1325 aa3.7□□□□□ -1.82
CHD4-209ENST00000542717 COL1A2P08123 1366 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 CABIN1Q9Y6J0 2220 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 A0A1W2PQD8 194 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 ZNF316A6NFI3 1004 aaPredicted RBP3.69□□□□□ -1.82
CHD4-209ENST00000542717 PATL2C9JE40 543 aaKnown RBP3.69□□□□□ -1.82
CHD4-209ENST00000542717 TRDMT1O14717 391 aaKnown RBP3.69□□□□□ -1.82
CHD4-209ENST00000542717 OPLAHO14841 1288 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 ADAM12O43184 909 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 GPAA1O43292 621 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 PPFIA2O75334 1257 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 CILPO75339 1184 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 MICAL2O94851 1124 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 DKK1O94907 266 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 CER1O95813 267 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 C8BP07358 591 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 DARSP14868 501 aaKnown RBP3.69□□□□□ -1.82
CHD4-209ENST00000542717 KCNA2P16389 499 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 P2RY2P41231 377 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 MATKP42679 507 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 SLC26A2P50443 739 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 INHBCP55103 352 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 SEC13P55735 322 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 FOXK1P85037 733 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 PLCB2Q00722 1185 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 SPIRE1Q08AE8 756 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 FCHO2Q0JRZ9 810 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 GRIK2Q13002 908 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 MTMR1Q13613 665 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 SPDYCQ5MJ68 293 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 PEAR1Q5VY43 1037 aaPredicted RBP3.69□□□□□ -1.82
CHD4-209ENST00000542717 FAM160B1Q5W0V3 765 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 PCNX4Q63HM2 1172 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 EFCAB12Q6NXP0 572 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 CCDC81Q6ZN84 652 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 RTL10Q7L3V2 364 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 CATSPER4Q7RTX7 472 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 ATCAYQ86WG3 371 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 RASSF3Q86WH2 238 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 PTRH1Q86Y79 214 aaKnown RBP3.69□□□□□ -1.82
CHD4-209ENST00000542717 HOMER1Q86YM7 354 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 TICAM1Q8IUC6 712 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 ERC1Q8IUD2 1116 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 HS6ST3Q8IZP7 471 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 MMP21Q8N119 569 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 LRRC71Q8N4P6 559 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 CCDC33Q8N5R6 958 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 DAGLBQ8NCG7 672 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 CCDC26Q8TAB7 109 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 SMARCC2Q8TAQ2 1214 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 CCER1Q8TC90 406 aaPredicted RBP3.69□□□□□ -1.82
CHD4-209ENST00000542717 HASPINQ8TF76 798 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 HMGB4Q8WW32 186 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 RABGGTAQ92696 567 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 CUL5Q93034 780 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 GPRASP2Q96D09 838 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 RSPRY1Q96DX4 576 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 P2RY13Q9BPV8 354 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 SDF4Q9BRK5 362 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 TTPALQ9BTX7 342 aa3.69□□□□□ -1.82
CHD4-209ENST00000542717 GCOM2Q9BZD3 368 aaPredicted RBP3.69□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms