RNA–Protein interactions for RNA: ENST00000542557.5

PTPRO-208, Transcript of protein tyrosine phosphatase, receptor type O, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRO, Length 2,946 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRO-208ENST00000542557 ANGEL2Q5VTE6 544 aaKnown RBP7□□□□□ -1.29
PTPRO-208ENST00000542557 TDRD10Q5VZ19 366 aaKnown RBP7□□□□□ -1.29
PTPRO-208ENST00000542557 DENND2CQ68D51 928 aa7□□□□□ -1.29
PTPRO-208ENST00000542557 SYDE1Q6ZW31 735 aaPredicted RBP7□□□□□ -1.29
PTPRO-208ENST00000542557 MICALCLQ6ZW33 695 aa7□□□□□ -1.29
PTPRO-208ENST00000542557 C10orf67Q8IYJ2 551 aa7□□□□□ -1.29
PTPRO-208ENST00000542557 MYCBPAPQ8TBZ2 947 aa7□□□□□ -1.29
PTPRO-208ENST00000542557 ZNF473Q8WTR7 871 aaKnown RBP7□□□□□ -1.29
PTPRO-208ENST00000542557 PPM1EQ8WY54 764 aa7□□□□□ -1.29
PTPRO-208ENST00000542557 ART4Q93070 314 aa7□□□□□ -1.29
PTPRO-208ENST00000542557 BTBD6Q96KE9 485 aa7□□□□□ -1.29
PTPRO-208ENST00000542557 CEP89Q96ST8 783 aa7□□□□□ -1.29
PTPRO-208ENST00000542557 CGRRF1Q99675 332 aa7□□□□□ -1.29
PTPRO-208ENST00000542557 TMEM134Q9H6X4 195 aa7□□□□□ -1.29
PTPRO-208ENST00000542557 CHORDC1Q9UHD1 332 aaPredicted RBP7□□□□□ -1.29
PTPRO-208ENST00000542557 ANAPC7Q9UJX3 599 aa7□□□□□ -1.29
PTPRO-208ENST00000542557 CNTN6Q9UQ52 1028 aa7□□□□□ -1.29
PTPRO-208ENST00000542557 TELO2Q9Y4R8 837 aa7□□□□□ -1.29
PTPRO-208ENST00000542557 AFG3L2Q9Y4W6 797 aa7□□□□□ -1.29
PTPRO-208ENST00000542557 GJA3Q9Y6H8 435 aa7□□□□□ -1.29
PTPRO-208ENST00000542557 PTPRFP10586 1907 aa6.99□□□□□ -1.29
PTPRO-208ENST00000542557 MROH7Q68CQ1 1323 aa6.99□□□□□ -1.29
PTPRO-208ENST00000542557 ADGRA2Q96PE1 1338 aa6.99□□□□□ -1.29
PTPRO-208ENST00000542557 ATP4AP20648 1035 aa6.99□□□□□ -1.29
PTPRO-208ENST00000542557 ACO1P21399 889 aaKnown RBP6.99□□□□□ -1.29
PTPRO-208ENST00000542557 TBXAS1P24557 533 aaPredicted RBP6.99□□□□□ -1.29
PTPRO-208ENST00000542557 NSFP46459 744 aaKnown RBP6.99□□□□□ -1.29
PTPRO-208ENST00000542557 NLRP11P59045 1033 aaKnown RBP6.99□□□□□ -1.29
PTPRO-208ENST00000542557 SP2Q02086 613 aa6.99□□□□□ -1.29
PTPRO-208ENST00000542557 CUL2Q13617 745 aa6.99□□□□□ -1.29
PTPRO-208ENST00000542557 CRELD2Q6UXH1 353 aaPredicted RBP6.99□□□□□ -1.29
PTPRO-208ENST00000542557 MON1BQ7L1V2 547 aa6.99□□□□□ -1.29
PTPRO-208ENST00000542557 ARMC9Q7Z3E5 817 aa6.99□□□□□ -1.29
PTPRO-208ENST00000542557 YTHDF3Q7Z739 585 aaKnown RBP6.99□□□□□ -1.29
PTPRO-208ENST00000542557 CCDC105Q8IYK2 499 aa6.99□□□□□ -1.29
PTPRO-208ENST00000542557 DEPTORQ8TB45 409 aa6.99□□□□□ -1.29
PTPRO-208ENST00000542557 ASAP3Q8TDY4 903 aa6.99□□□□□ -1.29
PTPRO-208ENST00000542557 SLC7A3Q8WY07 619 aa6.99□□□□□ -1.29
PTPRO-208ENST00000542557 VCPIP1Q96JH7 1222 aa6.99□□□□□ -1.29
PTPRO-208ENST00000542557 PI4K2AQ9BTU6 479 aa6.99□□□□□ -1.29
PTPRO-208ENST00000542557 CENPHQ9H3R5 247 aa6.99□□□□□ -1.29
PTPRO-208ENST00000542557 PLSCR2Q9NRY7 297 aa6.99□□□□□ -1.29
PTPRO-208ENST00000542557 RBAKQ9NYW8 714 aaPredicted RBP6.99□□□□□ -1.29
PTPRO-208ENST00000542557 FBXO40Q9UH90 709 aa6.99□□□□□ -1.29
PTPRO-208ENST00000542557 NOVA2Q9UNW9 492 aaKnown RBP6.99□□□□□ -1.29
PTPRO-208ENST00000542557 A0A0B4J269 797 aa6.99□□□□□ -1.29
PTPRO-208ENST00000542557 TCRBV7S2A1N4TA0A589 114 aa6.99□□□□□ -1.29
PTPRO-208ENST00000542557 FAM170AA1A519 330 aa6.99□□□□□ -1.29
PTPRO-208ENST00000542557 PSTPIP1O43586 416 aa6.99□□□□□ -1.29
PTPRO-208ENST00000542557 TRAPPC3O43617 180 aa6.99□□□□□ -1.29
PTPRO-208ENST00000542557 VNN1O95497 513 aa6.99□□□□□ -1.29
PTPRO-208ENST00000542557 RARGP13631 454 aa6.99□□□□□ -1.29
PTPRO-208ENST00000542557 TCF3P15923 654 aa6.99□□□□□ -1.29
PTPRO-208ENST00000542557 TNNI1P19237 187 aa6.99□□□□□ -1.29
PTPRO-208ENST00000542557 EDNRBP24530 442 aa6.99□□□□□ -1.29
PTPRO-208ENST00000542557 AP3M2P53677 418 aa6.99□□□□□ -1.29
PTPRO-208ENST00000542557 SP4Q02446 784 aa6.99□□□□□ -1.29
PTPRO-208ENST00000542557 ADCY2Q08462 1091 aa6.99□□□□□ -1.29
PTPRO-208ENST00000542557 GRM1Q13255 1194 aa6.99□□□□□ -1.29
PTPRO-208ENST00000542557 TARBP2Q15633 366 aaKnown RBP6.99□□□□□ -1.29
PTPRO-208ENST00000542557 TADA2BQ86TJ2 420 aa6.99□□□□□ -1.29
PTPRO-208ENST00000542557 CPNE8Q86YQ8 564 aa6.99□□□□□ -1.29
PTPRO-208ENST00000542557 DDX55Q8NHQ9 600 aaKnown RBP eCLIP6.99□□□□□ -1.29
PTPRO-208ENST00000542557 CENPTQ96BT3 561 aa6.99□□□□□ -1.29
PTPRO-208ENST00000542557 CCT8L2Q96SF2 557 aa6.99□□□□□ -1.29
PTPRO-208ENST00000542557 WHRNQ9P202 907 aa6.99□□□□□ -1.29
PTPRO-208ENST00000542557 SBDSQ9Y3A5 250 aaKnown RBP eCLIP6.99□□□□□ -1.29
PTPRO-208ENST00000542557 PTPRJQ12913 1337 aa6.98□□□□□ -1.29
PTPRO-208ENST00000542557 UMODL1Q5DID0 1318 aa6.98□□□□□ -1.29
PTPRO-208ENST00000542557 ZNF541Q9H0D2 1346 aa6.98□□□□□ -1.29
PTPRO-208ENST00000542557 C5orf60A6NFR6 353 aa6.98□□□□□ -1.29
PTPRO-208ENST00000542557 PROSCO94903 275 aa6.98□□□□□ -1.29
PTPRO-208ENST00000542557 CLTAP09496 248 aa6.98□□□□□ -1.29
PTPRO-208ENST00000542557 RRM1P23921 792 aa6.98□□□□□ -1.29
PTPRO-208ENST00000542557 ALDH5A1P51649 535 aaPredicted RBP6.98□□□□□ -1.29
PTPRO-208ENST00000542557 WNT7BP56706 349 aa6.98□□□□□ -1.29
PTPRO-208ENST00000542557 MAGOHP61326 146 aaKnown RBP6.98□□□□□ -1.29
PTPRO-208ENST00000542557 NOMO3P69849 1222 aa6.98□□□□□ -1.29
PTPRO-208ENST00000542557 ZNF568Q3ZCX4 644 aa6.98□□□□□ -1.29
PTPRO-208ENST00000542557 SGO2Q562F6 1265 aa6.98□□□□□ -1.29
PTPRO-208ENST00000542557 LIN9Q5TKA1 542 aa6.98□□□□□ -1.29
PTPRO-208ENST00000542557 ZPBP2Q6X784 338 aa6.98□□□□□ -1.29
PTPRO-208ENST00000542557 LBX2Q6XYB7 198 aa6.98□□□□□ -1.29
PTPRO-208ENST00000542557 PHF13Q86YI8 300 aaPredicted RBP6.98□□□□□ -1.29
PTPRO-208ENST00000542557 GRK7Q8WTQ7 553 aa6.98□□□□□ -1.29
PTPRO-208ENST00000542557 MSTO1Q9BUK6 570 aa6.98□□□□□ -1.29
PTPRO-208ENST00000542557 HAPLN2Q9GZV7 340 aa6.98□□□□□ -1.29
PTPRO-208ENST00000542557 MTFR1LQ9H019 292 aa6.98□□□□□ -1.29
PTPRO-208ENST00000542557 STMN4Q9H169 189 aaPredicted RBP6.98□□□□□ -1.29
PTPRO-208ENST00000542557 MRPL47Q9HD33 250 aaKnown RBP6.98□□□□□ -1.29
PTPRO-208ENST00000542557 SCINQ9Y6U3 715 aa6.98□□□□□ -1.29
PTPRO-208ENST00000542557 CNTNAP2Q9UHC6 1331 aa6.98□□□□□ -1.29
PTPRO-208ENST00000542557 GMNCA6NCL1 334 aa6.98□□□□□ -1.29
PTPRO-208ENST00000542557 LRRIQ4A6NIV6 560 aa6.98□□□□□ -1.29
PTPRO-208ENST00000542557 K7ERI5 159 aa6.98□□□□□ -1.29
PTPRO-208ENST00000542557 CLDN3O15551 220 aa6.98□□□□□ -1.29
PTPRO-208ENST00000542557 RIPK2O43353 540 aa6.98□□□□□ -1.29
PTPRO-208ENST00000542557 FARP2O94887 1054 aaPredicted RBP6.98□□□□□ -1.29
PTPRO-208ENST00000542557 AGTP01019 485 aa6.98□□□□□ -1.29
PTPRO-208ENST00000542557 POTEJP0CG39 1038 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms