RNA–Protein interactions for RNA: ENST00000541549.2

EIF3A-203, Transcript of eukaryotic translation initiation factor 3 subunit A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene EIF3A, Length 4,495 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3A-203ENST00000541549 SPDYE2BA6NHP3 402 aa12.68□□□□□ -0.38
EIF3A-203ENST00000541549 SPDYE6P0CI01 402 aa12.68□□□□□ -0.38
EIF3A-203ENST00000541549 RPA1P27694 616 aa12.68□□□□□ -0.38
EIF3A-203ENST00000541549 FXR2P51116 673 aaKnown RBP eCLIP12.68□□□□□ -0.385e-8■■■■□ 21.6
EIF3A-203ENST00000541549 LRRC8EQ6NSJ5 796 aa12.68□□□□□ -0.38
EIF3A-203ENST00000541549 NLRP9Q7RTR0 991 aa12.68□□□□□ -0.38
EIF3A-203ENST00000541549 EXOC8Q8IYI6 725 aa12.68□□□□□ -0.38
EIF3A-203ENST00000541549 ZNF507Q8TCN5 953 aa12.68□□□□□ -0.38
EIF3A-203ENST00000541549 NCLNQ969V3 563 aa12.68□□□□□ -0.38
EIF3A-203ENST00000541549 NSL1Q96IY1 281 aa12.68□□□□□ -0.38
EIF3A-203ENST00000541549 AGAP3Q96P47 875 aa12.68□□□□□ -0.38
EIF3A-203ENST00000541549 POLR3CQ9BUI4 534 aaPredicted RBP12.68□□□□□ -0.38
EIF3A-203ENST00000541549 POLR3FQ9H1D9 316 aaPredicted RBP12.68□□□□□ -0.38
EIF3A-203ENST00000541549 XPO7Q9UIA9 1087 aaKnown RBP12.68□□□□□ -0.38
EIF3A-203ENST00000541549 MYO3BQ8WXR4 1341 aa12.68□□□□□ -0.38
EIF3A-203ENST00000541549 E2F8A0AVK6 867 aa12.68□□□□□ -0.38
EIF3A-203ENST00000541549 CCDC78A2IDD5 438 aa12.68□□□□□ -0.38
EIF3A-203ENST00000541549 CST8O60676 142 aa12.68□□□□□ -0.38
EIF3A-203ENST00000541549 CYP11B2P19099 503 aa12.68□□□□□ -0.38
EIF3A-203ENST00000541549 CNGA1P29973 690 aa12.68□□□□□ -0.38
EIF3A-203ENST00000541549 CDK17Q00537 523 aa12.68□□□□□ -0.38
EIF3A-203ENST00000541549 SMTNL2Q2TAL5 461 aa12.68□□□□□ -0.38
EIF3A-203ENST00000541549 ARL13BQ3SXY8 428 aa12.68□□□□□ -0.38
EIF3A-203ENST00000541549 ZMAT2Q96NC0 199 aaKnown RBP12.68□□□□□ -0.38
EIF3A-203ENST00000541549 SENP7Q9BQF6 1050 aa12.68□□□□□ -0.38
EIF3A-203ENST00000541549 ZSWIM1Q9BR11 485 aa12.68□□□□□ -0.38
EIF3A-203ENST00000541549 TUFT1Q9NNX1 390 aa12.68□□□□□ -0.38
EIF3A-203ENST00000541549 STX18Q9P2W9 335 aaKnown RBP12.68□□□□□ -0.38
EIF3A-203ENST00000541549 UNC13BO14795 1591 aa12.67□□□□□ -0.38
EIF3A-203ENST00000541549 COL15A1P39059 1388 aa12.67□□□□□ -0.38
EIF3A-203ENST00000541549 A0A087X0B3 334 aa12.67□□□□□ -0.38
EIF3A-203ENST00000541549 RSPH10B2B2RC85 870 aa12.67□□□□□ -0.38
EIF3A-203ENST00000541549 PDE2AO00408 941 aaPredicted RBP12.67□□□□□ -0.38
EIF3A-203ENST00000541549 RSPH10BP0C881 870 aa12.67□□□□□ -0.38
EIF3A-203ENST00000541549 OSBPP22059 807 aa12.67□□□□□ -0.38
EIF3A-203ENST00000541549 YWHABP31946 246 aaKnown RBP12.67□□□□□ -0.38
EIF3A-203ENST00000541549 PCYT1AP49585 367 aa12.67□□□□□ -0.38
EIF3A-203ENST00000541549 COL9A3Q14050 684 aaPredicted RBP12.67□□□□□ -0.38
EIF3A-203ENST00000541549 DUOXA2Q1HG44 320 aa12.67□□□□□ -0.38
EIF3A-203ENST00000541549 ZNF571Q7Z3V5 609 aaPredicted RBP12.67□□□□□ -0.38
EIF3A-203ENST00000541549 CATSPER3Q86XQ3 398 aa12.67□□□□□ -0.38
EIF3A-203ENST00000541549 NDUFAF2Q8N183 169 aa12.67□□□□□ -0.38
EIF3A-203ENST00000541549 PSPC1Q8WXF1 523 aaKnown RBP12.67□□□□□ -0.38
EIF3A-203ENST00000541549 TMA16Q96EY4 203 aaKnown RBP12.67□□□□□ -0.38
EIF3A-203ENST00000541549 NAF1Q96HR8 494 aaKnown RBP12.67□□□□□ -0.38
EIF3A-203ENST00000541549 TRIM15Q9C019 465 aa12.67□□□□□ -0.38
EIF3A-203ENST00000541549 CDC42EP4Q9H3Q1 356 aaKnown RBP12.67□□□□□ -0.38
EIF3A-203ENST00000541549 MANSC1Q9H8J5 431 aa12.67□□□□□ -0.38
EIF3A-203ENST00000541549 MTO1Q9Y2Z2 717 aaKnown RBP12.67□□□□□ -0.38
EIF3A-203ENST00000541549 SNX5Q9Y5X3 404 aa12.67□□□□□ -0.38
EIF3A-203ENST00000541549 ASAP2O43150 1006 aa12.67□□□□□ -0.38
EIF3A-203ENST00000541549 WEE2P0C1S8 567 aa12.67□□□□□ -0.38
EIF3A-203ENST00000541549 ERVK-9P63128 1117 aa12.67□□□□□ -0.38
EIF3A-203ENST00000541549 FAM217BQ9NTX9 383 aaPredicted RBP12.67□□□□□ -0.38
EIF3A-203ENST00000541549 CPSF3Q9UKF6 684 aaKnown RBP12.67□□□□□ -0.38
EIF3A-203ENST00000541549 PCDHB2Q9Y5E7 798 aa12.67□□□□□ -0.38
EIF3A-203ENST00000541549 FLT1P17948 1338 aa12.67□□□□□ -0.38
EIF3A-203ENST00000541549 ATICP31939 592 aa12.67□□□□□ -0.38
EIF3A-203ENST00000541549 ITIH4Q14624 930 aa12.67□□□□□ -0.38
EIF3A-203ENST00000541549 TEDDM1Q5T9Z0 273 aa12.67□□□□□ -0.38
EIF3A-203ENST00000541549 MEI1Q5TIA1 1274 aa12.67□□□□□ -0.38
EIF3A-203ENST00000541549 CREG2Q8IUH2 290 aa12.67□□□□□ -0.38
EIF3A-203ENST00000541549 GIPC2Q8TF65 315 aa12.67□□□□□ -0.38
EIF3A-203ENST00000541549 ACSF2Q96CM8 615 aaPredicted RBP12.67□□□□□ -0.38
EIF3A-203ENST00000541549 SPC25Q9HBM1 224 aa12.67□□□□□ -0.38
EIF3A-203ENST00000541549 RNF146Q9NTX7 359 aa12.67□□□□□ -0.38
EIF3A-203ENST00000541549 BMP6P22004 513 aa12.66□□□□□ -0.38
EIF3A-203ENST00000541549 GPC3P51654 580 aa12.66□□□□□ -0.38
EIF3A-203ENST00000541549 PRPF39Q86UA1 669 aaKnown RBP12.66□□□□□ -0.38
EIF3A-203ENST00000541549 LDHDQ86WU2 507 aa12.66□□□□□ -0.38
EIF3A-203ENST00000541549 ACTRT1Q8TDG2 376 aa12.66□□□□□ -0.38
EIF3A-203ENST00000541549 FAM111AQ96PZ2 611 aa12.66□□□□□ -0.38
EIF3A-203ENST00000541549 FSD1LQ9BXM9 530 aa12.66□□□□□ -0.38
EIF3A-203ENST00000541549 INTS13Q9NVM9 706 aa12.66□□□□□ -0.38
EIF3A-203ENST00000541549 GOLGA8CPA6NN73 597 aa12.66□□□□□ -0.38
EIF3A-203ENST00000541549 F8VZ95 297 aa12.66□□□□□ -0.38
EIF3A-203ENST00000541549 ATP6V1G2O95670 118 aa12.66□□□□□ -0.38
EIF3A-203ENST00000541549 SFNP31947 248 aa12.66□□□□□ -0.38
EIF3A-203ENST00000541549 AARSP49588 968 aaKnown RBP eCLIP12.66□□□□□ -0.382e-6■■□□□ 13
EIF3A-203ENST00000541549 RBBP8NLQ8NC74 664 aaPredicted RBP12.66□□□□□ -0.38
EIF3A-203ENST00000541549 OR6P1Q8NGX9 317 aa12.66□□□□□ -0.38
EIF3A-203ENST00000541549 SPATA18Q8TC71 538 aa12.66□□□□□ -0.38
EIF3A-203ENST00000541549 MTRQ99707 1265 aa12.66□□□□□ -0.38
EIF3A-203ENST00000541549 KDM4CQ9H3R0 1056 aa12.66□□□□□ -0.38
EIF3A-203ENST00000541549 PCDHA10Q9Y5I2 948 aa12.66□□□□□ -0.38
EIF3A-203ENST00000541549 FAM205AQ6ZU69 1335 aa12.66□□□□□ -0.38
EIF3A-203ENST00000541549 CEMIPQ8WUJ3 1361 aa12.66□□□□□ -0.38
EIF3A-203ENST00000541549 NDUFB10O96000 172 aa12.66□□□□□ -0.38
EIF3A-203ENST00000541549 FNTAP49354 379 aa12.66□□□□□ -0.38
EIF3A-203ENST00000541549 CATSPER4Q7RTX7 472 aa12.66□□□□□ -0.38
EIF3A-203ENST00000541549 KRT27Q7Z3Y8 459 aa12.66□□□□□ -0.38
EIF3A-203ENST00000541549 DPP9Q86TI2 863 aa12.66□□□□□ -0.38
EIF3A-203ENST00000541549 IFNEQ86WN2 208 aa12.66□□□□□ -0.38
EIF3A-203ENST00000541549 AENQ8WTP8 325 aaKnown RBP12.66□□□□□ -0.38
EIF3A-203ENST00000541549 SCG3Q8WXD2 468 aaKnown RBP12.66□□□□□ -0.38
EIF3A-203ENST00000541549 KCNK16Q96T55 309 aa12.66□□□□□ -0.38
EIF3A-203ENST00000541549 MKNK1Q9BUB5 465 aa12.66□□□□□ -0.38
EIF3A-203ENST00000541549 JMJD4Q9H9V9 463 aa12.66□□□□□ -0.38
EIF3A-203ENST00000541549 MRPL40Q9NQ50 206 aaKnown RBP12.66□□□□□ -0.38
EIF3A-203ENST00000541549 ABCF3Q9NUQ8 709 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms