RNA–Protein interactions for RNA: ENST00000541363.5

HMGA2-210, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 8,094 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-210ENST00000541363 FAM98CQ17RN3 349 aaKnown RBP16.11■□□□□ 0.17
HMGA2-210ENST00000541363 DENND6AQ8IWF6 608 aa16.11■□□□□ 0.17
HMGA2-210ENST00000541363 MDM1Q8TC05 714 aa16.11■□□□□ 0.17
HMGA2-210ENST00000541363 TRABDQ9H4I3 376 aa16.11■□□□□ 0.17
HMGA2-210ENST00000541363 NUP107P57740 925 aa16.11■□□□□ 0.17
HMGA2-210ENST00000541363 UBE3CQ15386 1083 aa16.11■□□□□ 0.17
HMGA2-210ENST00000541363 IFNEQ86WN2 208 aa16.11■□□□□ 0.17
HMGA2-210ENST00000541363 UXS1Q8NBZ7 420 aa16.11■□□□□ 0.17
HMGA2-210ENST00000541363 TUBGCP4Q9UGJ1 667 aa16.11■□□□□ 0.17
HMGA2-210ENST00000541363 KDM5AP29375 1690 aaKnown RBP16.1■□□□□ 0.17
HMGA2-210ENST00000541363 PITPNM2Q9BZ72 1349 aa16.1■□□□□ 0.17
HMGA2-210ENST00000541363 CDH6P55285 790 aa16.1■□□□□ 0.17
HMGA2-210ENST00000541363 VN1R5Q7Z5H4 357 aa16.1■□□□□ 0.17
HMGA2-210ENST00000541363 NMRK1Q9NWW6 199 aa16.1■□□□□ 0.17
HMGA2-210ENST00000541363 SPACA6W5XKT8 324 aa16.1■□□□□ 0.17
HMGA2-210ENST00000541363 ABCC4O15439 1325 aa16.1■□□□□ 0.17
HMGA2-210ENST00000541363 DYRK3O43781 588 aa16.1■□□□□ 0.17
HMGA2-210ENST00000541363 TBC1D12O60347 775 aa16.1■□□□□ 0.17
HMGA2-210ENST00000541363 CAND2O75155 1236 aa16.1■□□□□ 0.17
HMGA2-210ENST00000541363 LCP1P13796 627 aa16.1■□□□□ 0.17
HMGA2-210ENST00000541363 CPB1P15086 417 aa16.1■□□□□ 0.17
HMGA2-210ENST00000541363 GSTA3Q16772 222 aa16.1■□□□□ 0.17
HMGA2-210ENST00000541363 KDELC2Q7Z4H8 507 aa16.1■□□□□ 0.17
HMGA2-210ENST00000541363 SRLQ86TD4 932 aa16.1■□□□□ 0.17
HMGA2-210ENST00000541363 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.1■□□□□ 0.17
HMGA2-210ENST00000541363 PDE5AO76074 875 aa16.1■□□□□ 0.17
HMGA2-210ENST00000541363 ADORA2BP29275 332 aa16.1■□□□□ 0.17
HMGA2-210ENST00000541363 PRIM2P49643 509 aa16.1■□□□□ 0.17
HMGA2-210ENST00000541363 ERAP2Q6P179 960 aa16.1■□□□□ 0.17
HMGA2-210ENST00000541363 MICALL2Q8IY33 904 aa16.1■□□□□ 0.17
HMGA2-210ENST00000541363 EDC3Q96F86 508 aaKnown RBP16.1■□□□□ 0.17
HMGA2-210ENST00000541363 WNK4Q96J92 1243 aa16.1■□□□□ 0.17
HMGA2-210ENST00000541363 PIK3C2GO75747 1445 aa16.1■□□□□ 0.17
HMGA2-210ENST00000541363 MAGEA10P43363 369 aaPredicted RBP16.1■□□□□ 0.17
HMGA2-210ENST00000541363 LRRC8DQ7L1W4 858 aa16.1■□□□□ 0.17
HMGA2-210ENST00000541363 ZNF438Q7Z4V0 828 aa16.1■□□□□ 0.17
HMGA2-210ENST00000541363 TASP1Q9H6P5 420 aa16.1■□□□□ 0.17
HMGA2-210ENST00000541363 ALG13Q9NP73 1137 aaKnown RBP16.1■□□□□ 0.17
HMGA2-210ENST00000541363 E9PBE3 544 aa16.1■□□□□ 0.17
HMGA2-210ENST00000541363 TCN1P20061 433 aaPredicted RBP16.1■□□□□ 0.17
HMGA2-210ENST00000541363 PRRG3Q9BZD7 231 aa16.1■□□□□ 0.17
HMGA2-210ENST00000541363 ARIH1Q9Y4X5 557 aaPredicted RBP16.1■□□□□ 0.17
HMGA2-210ENST00000541363 LINC00854A0A1B0GVQ3 168 aa16.1■□□□□ 0.17
HMGA2-210ENST00000541363 TRIM32Q13049 653 aa16.1■□□□□ 0.17
HMGA2-210ENST00000541363 CFAP99D6REC4 459 aa16.09■□□□□ 0.17
HMGA2-210ENST00000541363 H2AFYO75367 372 aaKnown RBP16.09■□□□□ 0.17
HMGA2-210ENST00000541363 CHSY1Q86X52 802 aa16.09■□□□□ 0.17
HMGA2-210ENST00000541363 XXYLT1Q8NBI6 393 aa16.09■□□□□ 0.17
HMGA2-210ENST00000541363 PLEKHA5Q9HAU0 1116 aa16.09■□□□□ 0.17
HMGA2-210ENST00000541363 LEMD3Q9Y2U8 911 aa16.09■□□□□ 0.17
HMGA2-210ENST00000541363 GYS1P13807 737 aa16.09■□□□□ 0.17
HMGA2-210ENST00000541363 MAPKAPK2P49137 400 aa16.09■□□□□ 0.17
HMGA2-210ENST00000541363 SERPINB9P50453 376 aa16.09■□□□□ 0.17
HMGA2-210ENST00000541363 CYP4Z1Q86W10 505 aa16.09■□□□□ 0.17
HMGA2-210ENST00000541363 AATKQ6ZMQ8 1374 aa16.09■□□□□ 0.17
HMGA2-210ENST00000541363 FANCAO15360 1455 aa16.09■□□□□ 0.17
HMGA2-210ENST00000541363 FAM25AB3EWG3 89 aa16.09■□□□□ 0.17
HMGA2-210ENST00000541363 FAM25CB3EWG5 89 aa16.09■□□□□ 0.17
HMGA2-210ENST00000541363 FAM25GB3EWG6 89 aa16.09■□□□□ 0.17
HMGA2-210ENST00000541363 GDF11O95390 407 aa16.09■□□□□ 0.17
HMGA2-210ENST00000541363 CCND1P24385 295 aa16.09■□□□□ 0.17
HMGA2-210ENST00000541363 VAMP7P51809 220 aa16.09■□□□□ 0.17
HMGA2-210ENST00000541363 PTRHD1Q6GMV3 140 aaKnown RBP16.09■□□□□ 0.17
HMGA2-210ENST00000541363 GSPT2Q8IYD1 628 aaKnown RBP16.09■□□□□ 0.17
HMGA2-210ENST00000541363 HS6ST3Q8IZP7 471 aa16.09■□□□□ 0.17
HMGA2-210ENST00000541363 LSM7Q9UK45 103 aaKnown RBP16.09■□□□□ 0.17
HMGA2-210ENST00000541363 UBE2SQ16763 222 aa16.09■□□□□ 0.17
HMGA2-210ENST00000541363 ENOSF1Q7L5Y1 443 aa16.09■□□□□ 0.17
HMGA2-210ENST00000541363 WDR36Q8NI36 951 aaKnown RBP16.09■□□□□ 0.17
HMGA2-210ENST00000541363 FAM213AQ9BRX8 229 aa16.09■□□□□ 0.17
HMGA2-210ENST00000541363 IL1RL2Q9HB29 575 aa16.09■□□□□ 0.17
HMGA2-210ENST00000541363 TUFT1Q9NNX1 390 aa16.09■□□□□ 0.17
HMGA2-210ENST00000541363 CTNNAL1Q9UBT7 734 aa16.09■□□□□ 0.17
HMGA2-210ENST00000541363 MTO1Q9Y2Z2 717 aaKnown RBP16.09■□□□□ 0.17
HMGA2-210ENST00000541363 SFI1A8K8P3 1242 aa16.09■□□□□ 0.17
HMGA2-210ENST00000541363 STX7O15400 261 aaKnown RBP16.09■□□□□ 0.17
HMGA2-210ENST00000541363 ALOX15P16050 662 aaPredicted RBP16.09■□□□□ 0.17
HMGA2-210ENST00000541363 JAK1P23458 1154 aa16.09■□□□□ 0.17
HMGA2-210ENST00000541363 C1DQ13901 141 aaKnown RBP16.09■□□□□ 0.17
HMGA2-210ENST00000541363 ANKMY2Q8IV38 441 aa16.09■□□□□ 0.17
HMGA2-210ENST00000541363 DNAJC9Q8WXX5 260 aa16.09■□□□□ 0.17
HMGA2-210ENST00000541363 CARD14Q9BXL6 1004 aa16.09■□□□□ 0.17
HMGA2-210ENST00000541363 MTMR1Q13613 665 aa16.09■□□□□ 0.17
HMGA2-210ENST00000541363 TRIQKQ629K1 86 aa16.09■□□□□ 0.17
HMGA2-210ENST00000541363 ARL6IP4Q66PJ3 421 aaKnown RBP16.09■□□□□ 0.17
HMGA2-210ENST00000541363 SDE2Q6IQ49 451 aa16.09■□□□□ 0.17
HMGA2-210ENST00000541363 KLHL17Q6TDP4 642 aa16.09■□□□□ 0.17
HMGA2-210ENST00000541363 KRT74Q7RTS7 529 aa16.09■□□□□ 0.17
HMGA2-210ENST00000541363 C11orf70Q9BRQ4 267 aa16.09■□□□□ 0.17
HMGA2-210ENST00000541363 DHX36Q9H2U1 1008 aaKnown RBP16.09■□□□□ 0.17
HMGA2-210ENST00000541363 DSG1Q02413 1049 aa16.08■□□□□ 0.17
HMGA2-210ENST00000541363 PRPF39Q86UA1 669 aaKnown RBP16.08■□□□□ 0.17
HMGA2-210ENST00000541363 TRIM48Q8IWZ4 208 aa16.08■□□□□ 0.17
HMGA2-210ENST00000541363 MRPL4Q9BYD3 311 aaKnown RBP16.08■□□□□ 0.17
HMGA2-210ENST00000541363 CAPN10Q9HC96 672 aa16.08■□□□□ 0.17
HMGA2-210ENST00000541363 SOX11P35716 441 aa16.08■□□□□ 0.17
HMGA2-210ENST00000541363 SULT1E1P49888 294 aa16.08■□□□□ 0.17
HMGA2-210ENST00000541363 SERPINH1P50454 418 aaKnown RBP16.08■□□□□ 0.17
HMGA2-210ENST00000541363 TRIP10Q15642 601 aa16.08■□□□□ 0.17
HMGA2-210ENST00000541363 KRT73Q86Y46 540 aa16.08■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms