RNA–Protein interactions for RNA: ENST00000541342.2

SPIDR-227, Transcript of scaffold protein involved in DNA repair, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SPIDR, Length 3,311 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-227ENST00000541342 SPATA33Q96N06 139 aa18.38■□□□□ 0.53
SPIDR-227ENST00000541342 EDN1P05305 212 aa18.37■□□□□ 0.53
SPIDR-227ENST00000541342 TXNP10599 105 aaKnown RBP18.37■□□□□ 0.53
SPIDR-227ENST00000541342 NAMPTP43490 491 aa18.37■□□□□ 0.53
SPIDR-227ENST00000541342 PRPF4BQ13523 1007 aaKnown RBP18.37■□□□□ 0.53
SPIDR-227ENST00000541342 ERMARDQ5T6L9 678 aa18.37■□□□□ 0.53
SPIDR-227ENST00000541342 CCDC121Q6ZUS5 278 aa18.37■□□□□ 0.53
SPIDR-227ENST00000541342 ANKRD23Q86SG2 305 aa18.37■□□□□ 0.53
SPIDR-227ENST00000541342 DHX37Q8IY37 1157 aaKnown RBP18.37■□□□□ 0.53
SPIDR-227ENST00000541342 PARD3BQ8TEW8 1205 aa18.37■□□□□ 0.53
SPIDR-227ENST00000541342 RNF25Q96BH1 459 aaPredicted RBP18.37■□□□□ 0.53
SPIDR-227ENST00000541342 CCDC127Q96BQ5 260 aa18.37■□□□□ 0.53
SPIDR-227ENST00000541342 BICD1Q96G01 975 aa18.37■□□□□ 0.53
SPIDR-227ENST00000541342 PTPN18Q99952 460 aa18.37■□□□□ 0.53
SPIDR-227ENST00000541342 AZI2Q9H6S1 392 aa18.37■□□□□ 0.53
SPIDR-227ENST00000541342 MAFO75444 373 aaPredicted RBP18.37■□□□□ 0.53
SPIDR-227ENST00000541342 SPDYCQ5MJ68 293 aa18.37■□□□□ 0.53
SPIDR-227ENST00000541342 ARHGEF19Q8IW93 802 aa18.37■□□□□ 0.53
SPIDR-227ENST00000541342 CTNNBL1Q8WYA6 563 aaPredicted RBP18.37■□□□□ 0.53
SPIDR-227ENST00000541342 MFSD14AQ96MC6 490 aa18.37■□□□□ 0.53
SPIDR-227ENST00000541342 LRRIQ4A6NIV6 560 aa18.36■□□□□ 0.53
SPIDR-227ENST00000541342 NOP56O00567 594 aaKnown RBP18.36■□□□□ 0.53
SPIDR-227ENST00000541342 KIAA0391O15091 583 aaKnown RBP18.36■□□□□ 0.53
SPIDR-227ENST00000541342 P4HA2O15460 535 aa18.36■□□□□ 0.53
SPIDR-227ENST00000541342 NUDT17P0C025 328 aa18.36■□□□□ 0.53
SPIDR-227ENST00000541342 MARCKSL1P49006 195 aa18.36■□□□□ 0.53
SPIDR-227ENST00000541342 SPRYD7Q5W111 196 aa18.36■□□□□ 0.53
SPIDR-227ENST00000541342 KCNN1Q92952 543 aa18.36■□□□□ 0.53
SPIDR-227ENST00000541342 HAPLN2Q9GZV7 340 aa18.36■□□□□ 0.53
SPIDR-227ENST00000541342 TOPORSQ9NS56 1045 aaPredicted RBP18.36■□□□□ 0.53
SPIDR-227ENST00000541342 GEMIN8Q9NWZ8 242 aaKnown RBP18.36■□□□□ 0.53
SPIDR-227ENST00000541342 GARTP22102 1010 aa18.36■□□□□ 0.53
SPIDR-227ENST00000541342 CCNA1P78396 465 aa18.36■□□□□ 0.53
SPIDR-227ENST00000541342 CAPSQ13938 189 aa18.36■□□□□ 0.53
SPIDR-227ENST00000541342 JAMLQ86YT9 394 aa18.36■□□□□ 0.53
SPIDR-227ENST00000541342 FBXO25Q8TCJ0 367 aa18.36■□□□□ 0.53
SPIDR-227ENST00000541342 C18orf8Q96DM3 657 aa18.36■□□□□ 0.53
SPIDR-227ENST00000541342 RAB17Q9H0T7 212 aa18.36■□□□□ 0.53
SPIDR-227ENST00000541342 GRHL1Q9NZI5 618 aa18.36■□□□□ 0.53
SPIDR-227ENST00000541342 LOC102724159A0A0B4J2E5 919 aa18.36■□□□□ 0.53
SPIDR-227ENST00000541342 ASB14A6NK59 587 aa18.36■□□□□ 0.53
SPIDR-227ENST00000541342 H0YCG3 227 aa18.36■□□□□ 0.53
SPIDR-227ENST00000541342 MXI1P50539 228 aa18.36■□□□□ 0.53
SPIDR-227ENST00000541342 CYP24A1Q07973 514 aa18.36■□□□□ 0.53
SPIDR-227ENST00000541342 PWP2Q15269 919 aaKnown RBP18.36■□□□□ 0.53
SPIDR-227ENST00000541342 SLC20A1Q8WUM9 679 aa18.36■□□□□ 0.53
SPIDR-227ENST00000541342 CCT6BQ92526 530 aa18.36■□□□□ 0.53
SPIDR-227ENST00000541342 KRT35Q92764 455 aa18.36■□□□□ 0.53
SPIDR-227ENST00000541342 ZNF317Q96PQ6 595 aaPredicted RBP18.36■□□□□ 0.53
SPIDR-227ENST00000541342 MORF4L1Q9UBU8 362 aa18.36■□□□□ 0.53
SPIDR-227ENST00000541342 PTGIRP43119 386 aa18.35■□□□□ 0.53
SPIDR-227ENST00000541342 MAP2K1Q02750 393 aaPredicted RBP18.35■□□□□ 0.53
SPIDR-227ENST00000541342 MKRN4PQ13434 485 aaPredicted RBP18.35■□□□□ 0.53
SPIDR-227ENST00000541342 ARHGAP44Q17R89 818 aa18.35■□□□□ 0.53
SPIDR-227ENST00000541342 GJC2Q5T442 439 aaPredicted RBP18.35■□□□□ 0.53
SPIDR-227ENST00000541342 TAPT1Q6NXT6 567 aa18.35■□□□□ 0.53
SPIDR-227ENST00000541342 GPD1LQ8N335 351 aa18.35■□□□□ 0.53
SPIDR-227ENST00000541342 C2orf69Q8N8R5 385 aa18.35■□□□□ 0.53
SPIDR-227ENST00000541342 SEMA4DQ92854 862 aa18.35■□□□□ 0.53
SPIDR-227ENST00000541342 XPO6Q96QU8 1125 aaKnown RBP18.35■□□□□ 0.53
SPIDR-227ENST00000541342 JPH2Q9BR39 696 aaPredicted RBP18.35■□□□□ 0.53
SPIDR-227ENST00000541342 FAM213AQ9BRX8 229 aa18.35■□□□□ 0.53
SPIDR-227ENST00000541342 PABPC3Q9H361 631 aaKnown RBP18.35■□□□□ 0.53
SPIDR-227ENST00000541342 DAAM1Q9Y4D1 1078 aa18.35■□□□□ 0.53
SPIDR-227ENST00000541342 PCDHA3Q9Y5H8 950 aa18.35■□□□□ 0.53
SPIDR-227ENST00000541342 PMM2O15305 246 aa18.35■□□□□ 0.53
SPIDR-227ENST00000541342 EIF3BP55884 814 aaKnown RBP18.35■□□□□ 0.53
SPIDR-227ENST00000541342 PLPPR4Q7Z2D5 763 aa18.35■□□□□ 0.53
SPIDR-227ENST00000541342 CACNA2D3Q8IZS8 1091 aa18.35■□□□□ 0.53
SPIDR-227ENST00000541342 DEPTORQ8TB45 409 aa18.35■□□□□ 0.53
SPIDR-227ENST00000541342 ATXN2LQ8WWM7 1075 aaKnown RBP18.35■□□□□ 0.53
SPIDR-227ENST00000541342 FAM129AQ9BZQ8 928 aa18.35■□□□□ 0.53
SPIDR-227ENST00000541342 DIS3Q9Y2L1 958 aaKnown RBP18.35■□□□□ 0.53
SPIDR-227ENST00000541342 TULP1O00294 542 aaPredicted RBP18.34■□□□□ 0.53
SPIDR-227ENST00000541342 FOXN3O00409 490 aaPredicted RBP18.34■□□□□ 0.53
SPIDR-227ENST00000541342 LIG4P49917 911 aa18.34■□□□□ 0.53
SPIDR-227ENST00000541342 PLTPP55058 493 aa18.34■□□□□ 0.53
SPIDR-227ENST00000541342 IFFO1Q0D2I5 559 aa18.34■□□□□ 0.53
SPIDR-227ENST00000541342 TTLL4Q14679 1199 aa18.34■□□□□ 0.53
SPIDR-227ENST00000541342 KIF22Q14807 665 aa18.34■□□□□ 0.53
SPIDR-227ENST00000541342 MAMDC4Q6UXC1 1216 aa18.34■□□□□ 0.53
SPIDR-227ENST00000541342 FAM228AQ86W67 206 aa18.34■□□□□ 0.53
SPIDR-227ENST00000541342 FAM167AQ96KS9 214 aa18.34■□□□□ 0.53
SPIDR-227ENST00000541342 ACTR5Q9H9F9 607 aaPredicted RBP18.34■□□□□ 0.53
SPIDR-227ENST00000541342 UBE2TQ9NPD8 197 aaPredicted RBP18.34■□□□□ 0.53
SPIDR-227ENST00000541342 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.34■□□□□ 0.536e-7■■■■■ 229.9
SPIDR-227ENST00000541342 SNX24Q9Y343 169 aa18.34■□□□□ 0.53
SPIDR-227ENST00000541342 STYXL1Q9Y6J8 313 aa18.34■□□□□ 0.53
SPIDR-227ENST00000541342 SCTRP47872 440 aa18.34■□□□□ 0.53
SPIDR-227ENST00000541342 LACTB2Q53H82 288 aaPredicted RBP18.34■□□□□ 0.53
SPIDR-227ENST00000541342 CST9Q5W186 159 aa18.34■□□□□ 0.53
SPIDR-227ENST00000541342 TTC27Q6P3X3 843 aa18.34■□□□□ 0.53
SPIDR-227ENST00000541342 FUKQ8N0W3 1084 aa18.34■□□□□ 0.53
SPIDR-227ENST00000541342 PRPF31Q8WWY3 499 aaKnown RBP18.34■□□□□ 0.53
SPIDR-227ENST00000541342 ZBTB45Q96K62 511 aaPredicted RBP18.34■□□□□ 0.53
SPIDR-227ENST00000541342 FAM84AQ96KN4 292 aa18.34■□□□□ 0.53
SPIDR-227ENST00000541342 ANKRD62A6NC57 917 aa18.34■□□□□ 0.53
SPIDR-227ENST00000541342 ABCD1P33897 745 aa18.34■□□□□ 0.53
SPIDR-227ENST00000541342 PMS2P54278 862 aa18.34■□□□□ 0.53
SPIDR-227ENST00000541342 CETN1Q12798 172 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms