RNA–Protein interactions for RNA: ENST00000541284.5

CNOT4-212, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene CNOT4, Length 3,563 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-212ENST00000541284 SF3A3Q12874 501 aaKnown RBP eCLIP10.18□□□□□ -0.78
CNOT4-212ENST00000541284 RELL1Q8IUW5 271 aa10.18□□□□□ -0.78
CNOT4-212ENST00000541284 SAMD3Q8N6K7 520 aa10.18□□□□□ -0.78
CNOT4-212ENST00000541284 SPIRE2Q8WWL2 714 aa10.18□□□□□ -0.78
CNOT4-212ENST00000541284 POMGNT1Q8WZA1 660 aa10.18□□□□□ -0.78
CNOT4-212ENST00000541284 NFASCO94856 1347 aa10.18□□□□□ -0.78
CNOT4-212ENST00000541284 RGS20O76081 388 aa10.18□□□□□ -0.78
CNOT4-212ENST00000541284 VNN1O95497 513 aa10.18□□□□□ -0.78
CNOT4-212ENST00000541284 ACSL3O95573 720 aa10.18□□□□□ -0.78
CNOT4-212ENST00000541284 KLRC2P26717 231 aa10.18□□□□□ -0.78
CNOT4-212ENST00000541284 DSG3P32926 999 aa10.18□□□□□ -0.78
CNOT4-212ENST00000541284 IFNAR2P48551 515 aa10.18□□□□□ -0.78
CNOT4-212ENST00000541284 PSMC5P62195 406 aa10.18□□□□□ -0.78
CNOT4-212ENST00000541284 CENPCQ03188 943 aa10.18□□□□□ -0.78
CNOT4-212ENST00000541284 SNX1Q13596 522 aa10.18□□□□□ -0.78
CNOT4-212ENST00000541284 LRRC14Q15048 493 aa10.18□□□□□ -0.78
CNOT4-212ENST00000541284 C2CD6Q53TS8 623 aa10.18□□□□□ -0.78
CNOT4-212ENST00000541284 TRPM8Q7Z2W7 1104 aa10.18□□□□□ -0.78
CNOT4-212ENST00000541284 WNK4Q96J92 1243 aa10.18□□□□□ -0.78
CNOT4-212ENST00000541284 TBC1D22BQ9NU19 505 aa10.18□□□□□ -0.78
CNOT4-212ENST00000541284 ANAPC7Q9UJX3 599 aa10.18□□□□□ -0.78
CNOT4-212ENST00000541284 MTUS1Q9ULD2 1270 aa10.18□□□□□ -0.78
CNOT4-212ENST00000541284 ZBTB12Q9Y330 459 aaPredicted RBP10.18□□□□□ -0.78
CNOT4-212ENST00000541284 TMEM120BA0PK00 339 aa10.18□□□□□ -0.78
CNOT4-212ENST00000541284 DENND3A2RUS2 1198 aa10.18□□□□□ -0.78
CNOT4-212ENST00000541284 ATP2C2O75185 946 aa10.18□□□□□ -0.78
CNOT4-212ENST00000541284 GJB6O95452 261 aa10.18□□□□□ -0.78
CNOT4-212ENST00000541284 ATP6V1G2O95670 118 aa10.18□□□□□ -0.78
CNOT4-212ENST00000541284 ALADP13716 330 aa10.18□□□□□ -0.78
CNOT4-212ENST00000541284 EIF2AK2P19525 551 aaKnown RBP10.18□□□□□ -0.78
CNOT4-212ENST00000541284 ITIH2P19823 946 aa10.18□□□□□ -0.78
CNOT4-212ENST00000541284 RPS12P25398 132 aaKnown RBP10.18□□□□□ -0.78
CNOT4-212ENST00000541284 RPS6P62753 249 aaKnown RBP10.18□□□□□ -0.78
CNOT4-212ENST00000541284 SGO2Q562F6 1265 aa10.18□□□□□ -0.78
CNOT4-212ENST00000541284 OGFOD1Q8N543 542 aa10.18□□□□□ -0.78
CNOT4-212ENST00000541284 CKAP2Q8WWK9 683 aa10.18□□□□□ -0.78
CNOT4-212ENST00000541284 SENP7Q9BQF6 1050 aa10.18□□□□□ -0.78
CNOT4-212ENST00000541284 PDCD2LQ9BRP1 358 aa10.18□□□□□ -0.78
CNOT4-212ENST00000541284 ITGBL1O95965 494 aaPredicted RBP10.17□□□□□ -0.78
CNOT4-212ENST00000541284 FAM102BQ5T8I3 360 aa10.17□□□□□ -0.78
CNOT4-212ENST00000541284 OTUD6AQ7L8S5 288 aa10.17□□□□□ -0.78
CNOT4-212ENST00000541284 CROCCP2Q86T23 111 aa10.17□□□□□ -0.78
CNOT4-212ENST00000541284 PRUNE1Q86TP1 453 aa10.17□□□□□ -0.78
CNOT4-212ENST00000541284 ARHGEF2Q92974 986 aaKnown RBP10.17□□□□□ -0.78
CNOT4-212ENST00000541284 SNF8Q96H20 258 aa10.17□□□□□ -0.78
CNOT4-212ENST00000541284 NT5C1BQ96P26 610 aa10.17□□□□□ -0.78
CNOT4-212ENST00000541284 TMX4Q9H1E5 349 aaPredicted RBP10.17□□□□□ -0.78
CNOT4-212ENST00000541284 APOBEC3GQ9HC16 384 aaKnown RBP10.17□□□□□ -0.78
CNOT4-212ENST00000541284 RAVER2Q9HCJ3 691 aaKnown RBP10.17□□□□□ -0.78
CNOT4-212ENST00000541284 PXMP2Q9NR77 195 aa10.17□□□□□ -0.78
CNOT4-212ENST00000541284 UBOX5O94941 541 aa10.17□□□□□ -0.78
CNOT4-212ENST00000541284 SNCBQ16143 134 aa10.17□□□□□ -0.78
CNOT4-212ENST00000541284 KYNUQ16719 465 aa10.17□□□□□ -0.78
CNOT4-212ENST00000541284 NOL9Q5SY16 702 aaKnown RBP10.17□□□□□ -0.78
CNOT4-212ENST00000541284 CRELD2Q6UXH1 353 aaPredicted RBP10.17□□□□□ -0.78
CNOT4-212ENST00000541284 GLIS1Q8NBF1 620 aa10.17□□□□□ -0.78
CNOT4-212ENST00000541284 CPA5Q8WXQ8 436 aa10.17□□□□□ -0.78
CNOT4-212ENST00000541284 FGFR1OP2Q9NVK5 253 aa10.17□□□□□ -0.78
CNOT4-212ENST00000541284 DNAJC17Q9NVM6 304 aaKnown RBP10.17□□□□□ -0.78
CNOT4-212ENST00000541284 ZNF541Q9H0D2 1346 aa10.17□□□□□ -0.78
CNOT4-212ENST00000541284 C4BPAP04003 597 aaKnown RBP10.16□□□□□ -0.78
CNOT4-212ENST00000541284 EDN1P05305 212 aa10.16□□□□□ -0.78
CNOT4-212ENST00000541284 SCP2P22307 547 aa10.16□□□□□ -0.78
CNOT4-212ENST00000541284 TRIP13Q15645 432 aaPredicted RBP10.16□□□□□ -0.78
CNOT4-212ENST00000541284 SAMD1Q6SPF0 538 aaPredicted RBP10.16□□□□□ -0.78
CNOT4-212ENST00000541284 SYDE1Q6ZW31 735 aaPredicted RBP10.16□□□□□ -0.78
CNOT4-212ENST00000541284 ASRGL1Q7L266 308 aa10.16□□□□□ -0.78
CNOT4-212ENST00000541284 DEFB132Q7Z7B7 95 aa10.16□□□□□ -0.78
CNOT4-212ENST00000541284 CCDC25Q86WR0 208 aa10.16□□□□□ -0.78
CNOT4-212ENST00000541284 IWS1Q96ST2 819 aa10.16□□□□□ -0.78
CNOT4-212ENST00000541284 ZNF341Q9BYN7 854 aa10.16□□□□□ -0.78
CNOT4-212ENST00000541284 ARHGAP28Q9P2N2 729 aa10.16□□□□□ -0.78
CNOT4-212ENST00000541284 CD2APQ9Y5K6 639 aa10.16□□□□□ -0.78
CNOT4-212ENST00000541284 TCRBV5S1A1TA0A578 114 aa10.16□□□□□ -0.78
CNOT4-212ENST00000541284 TCP11X1B4DZS4 312 aa10.16□□□□□ -0.78
CNOT4-212ENST00000541284 ATP2A1O14983 1001 aa10.16□□□□□ -0.78
CNOT4-212ENST00000541284 RAD17O75943 681 aa10.16□□□□□ -0.78
CNOT4-212ENST00000541284 PROSCO94903 275 aa10.16□□□□□ -0.78
CNOT4-212ENST00000541284 TCF4P15884 667 aa10.16□□□□□ -0.78
CNOT4-212ENST00000541284 MAPK4P31152 587 aa10.16□□□□□ -0.78
CNOT4-212ENST00000541284 FOXN2P32314 431 aa10.16□□□□□ -0.78
CNOT4-212ENST00000541284 KCNJ2P63252 427 aa10.16□□□□□ -0.78
CNOT4-212ENST00000541284 ZNF252P-AS1Q0IIN9 211 aa10.16□□□□□ -0.78
CNOT4-212ENST00000541284 XKR9Q5GH70 373 aa10.16□□□□□ -0.78
CNOT4-212ENST00000541284 TDRD10Q5VZ19 366 aaKnown RBP10.16□□□□□ -0.78
CNOT4-212ENST00000541284 PHLDB2Q86SQ0 1253 aa10.16□□□□□ -0.78
CNOT4-212ENST00000541284 MAML1Q92585 1016 aa10.16□□□□□ -0.78
CNOT4-212ENST00000541284 CNTN6Q9UQ52 1028 aa10.16□□□□□ -0.78
CNOT4-212ENST00000541284 STYXL1Q9Y6J8 313 aa10.16□□□□□ -0.78
CNOT4-212ENST00000541284 MYH9P35579 1960 aaKnown RBP10.16□□□□□ -0.78
CNOT4-212ENST00000541284 WDR64B1ANS9 1081 aa10.16□□□□□ -0.78
CNOT4-212ENST00000541284 ZC3H11AO75152 810 aaKnown RBP eCLIP10.16□□□□□ -0.78
CNOT4-212ENST00000541284 RALAP11233 206 aa10.16□□□□□ -0.78
CNOT4-212ENST00000541284 KCNA2P16389 499 aa10.16□□□□□ -0.78
CNOT4-212ENST00000541284 JAK3P52333 1124 aa10.16□□□□□ -0.78
CNOT4-212ENST00000541284 BNIP1Q12981 228 aa10.16□□□□□ -0.78
CNOT4-212ENST00000541284 RIPK1Q13546 671 aa10.16□□□□□ -0.78
CNOT4-212ENST00000541284 ZNF268Q14587 947 aaPredicted RBP10.16□□□□□ -0.78
CNOT4-212ENST00000541284 PPP1R7Q15435 360 aa10.16□□□□□ -0.78
CNOT4-212ENST00000541284 ZACNQ401N2 412 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms