RNA–Protein interactions for RNA: ENST00000540906.1

AP003559.1-201, humanhuman

TSL 3 BASIC

Gene AP003559.1, Length 1,831 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP003559.1-201ENST00000540906 CXorf38Q8TB03 319 aa13.19□□□□□ -0.3
AP003559.1-201ENST00000540906 NOX5Q96PH1 765 aa13.19□□□□□ -0.3
AP003559.1-201ENST00000540906 PSMB7Q99436 277 aa13.19□□□□□ -0.3
AP003559.1-201ENST00000540906 TLR10Q9BXR5 811 aa13.19□□□□□ -0.3
AP003559.1-201ENST00000540906 XYLT2Q9H1B5 865 aa13.19□□□□□ -0.3
AP003559.1-201ENST00000540906 RPF1Q9H9Y2 349 aaKnown RBP13.19□□□□□ -0.3
AP003559.1-201ENST00000540906 RNF19AQ9NV58 838 aa13.19□□□□□ -0.3
AP003559.1-201ENST00000540906 CHORDC1Q9UHD1 332 aaPredicted RBP13.19□□□□□ -0.3
AP003559.1-201ENST00000540906 PACSIN2Q9UNF0 486 aaPredicted RBP13.19□□□□□ -0.3
AP003559.1-201ENST00000540906 HTTP42858 3142 aa13.19□□□□□ -0.3
AP003559.1-201ENST00000540906 C17orf102A2RUQ5 167 aa13.18□□□□□ -0.3
AP003559.1-201ENST00000540906 BTNL10A8MVZ5 291 aa13.18□□□□□ -0.3
AP003559.1-201ENST00000540906 SEPT4O43236 478 aa13.18□□□□□ -0.3
AP003559.1-201ENST00000540906 NPTXRO95502 500 aa13.18□□□□□ -0.3
AP003559.1-201ENST00000540906 PRKAR2AP13861 404 aaKnown RBP13.18□□□□□ -0.3
AP003559.1-201ENST00000540906 MAP2K2P36507 400 aa13.18□□□□□ -0.3
AP003559.1-201ENST00000540906 DUOXA2Q1HG44 320 aa13.18□□□□□ -0.3
AP003559.1-201ENST00000540906 WDR44Q5JSH3 913 aa13.18□□□□□ -0.3
AP003559.1-201ENST00000540906 C10orf76Q5T2E6 689 aa13.18□□□□□ -0.3
AP003559.1-201ENST00000540906 VPS36Q86VN1 386 aa13.18□□□□□ -0.3
AP003559.1-201ENST00000540906 RNF10Q8N5U6 811 aaKnown RBP13.18□□□□□ -0.3
AP003559.1-201ENST00000540906 DNAJC5GQ8N7S2 189 aa13.18□□□□□ -0.3
AP003559.1-201ENST00000540906 C1orf127Q8N9H9 656 aa13.18□□□□□ -0.3
AP003559.1-201ENST00000540906 TRIM58Q8NG06 486 aa13.18□□□□□ -0.3
AP003559.1-201ENST00000540906 COG1Q8WTW3 980 aa13.18□□□□□ -0.3
AP003559.1-201ENST00000540906 VTI1AQ96AJ9 217 aa13.18□□□□□ -0.3
AP003559.1-201ENST00000540906 THAP2Q9H0W7 228 aa13.18□□□□□ -0.3
AP003559.1-201ENST00000540906 OSGEPQ9NPF4 335 aa13.18□□□□□ -0.3
AP003559.1-201ENST00000540906 SMARCAL1Q9NZC9 954 aa13.18□□□□□ -0.3
AP003559.1-201ENST00000540906 EHD2Q9NZN4 543 aa13.18□□□□□ -0.3
AP003559.1-201ENST00000540906 POLIQ9UNA4 740 aa13.18□□□□□ -0.3
AP003559.1-201ENST00000540906 COG5Q9UP83 839 aa13.18□□□□□ -0.3
AP003559.1-201ENST00000540906 HES2Q9Y543 173 aa13.18□□□□□ -0.3
AP003559.1-201ENST00000540906 PCDHGC5Q9Y5F6 944 aa13.18□□□□□ -0.3
AP003559.1-201ENST00000540906 NCANO14594 1321 aa13.18□□□□□ -0.3
AP003559.1-201ENST00000540906 ATMINO43313 823 aaPredicted RBP13.18□□□□□ -0.3
AP003559.1-201ENST00000540906 ERLIN2O94905 339 aa13.18□□□□□ -0.3
AP003559.1-201ENST00000540906 NAP1L1P55209 391 aaKnown RBP13.18□□□□□ -0.3
AP003559.1-201ENST00000540906 SNX17Q15036 470 aa13.18□□□□□ -0.3
AP003559.1-201ENST00000540906 NBPF20Q3BBV1 942 aa13.18□□□□□ -0.3
AP003559.1-201ENST00000540906 GDF6Q6KF10 455 aaPredicted RBP13.18□□□□□ -0.3
AP003559.1-201ENST00000540906 SCARA5Q6ZMJ2 495 aa13.18□□□□□ -0.3
AP003559.1-201ENST00000540906 RSRC2Q7L4I2 434 aaKnown RBP13.18□□□□□ -0.3
AP003559.1-201ENST00000540906 CATSPER4Q7RTX7 472 aa13.18□□□□□ -0.3
AP003559.1-201ENST00000540906 LRRC57Q8N9N7 239 aa13.18□□□□□ -0.3
AP003559.1-201ENST00000540906 ANKRD7Q92527 254 aa13.18□□□□□ -0.3
AP003559.1-201ENST00000540906 CAPZA3Q96KX2 299 aa13.18□□□□□ -0.3
AP003559.1-201ENST00000540906 GCOM2Q9BZD3 368 aaPredicted RBP13.18□□□□□ -0.3
AP003559.1-201ENST00000540906 OSBPL7Q9BZF2 842 aa13.18□□□□□ -0.3
AP003559.1-201ENST00000540906 CITO14578 2027 aa13.17□□□□□ -0.3
AP003559.1-201ENST00000540906 GRIN2DO15399 1336 aa13.17□□□□□ -0.3
AP003559.1-201ENST00000540906 ATP8B3O60423 1300 aa13.17□□□□□ -0.3
AP003559.1-201ENST00000540906 TMEM191BP0C7N4 346 aa13.17□□□□□ -0.3
AP003559.1-201ENST00000540906 TMEM253P0C7T8 217 aa13.17□□□□□ -0.3
AP003559.1-201ENST00000540906 CCDC172P0C7W6 258 aa13.17□□□□□ -0.3
AP003559.1-201ENST00000540906 CXCR5P32302 372 aa13.17□□□□□ -0.3
AP003559.1-201ENST00000540906 RAP1GAPP47736 663 aa13.17□□□□□ -0.3
AP003559.1-201ENST00000540906 CDR2Q01850 454 aa13.17□□□□□ -0.3
AP003559.1-201ENST00000540906 C7orf31Q8N865 590 aa13.17□□□□□ -0.3
AP003559.1-201ENST00000540906 MNS1Q8NEH6 495 aa13.17□□□□□ -0.3
AP003559.1-201ENST00000540906 TPCN2Q8NHX9 752 aa13.17□□□□□ -0.3
AP003559.1-201ENST00000540906 MMS19Q96T76 1030 aa13.17□□□□□ -0.3
AP003559.1-201ENST00000540906 MTG1Q9BT17 334 aaPredicted RBP13.17□□□□□ -0.3
AP003559.1-201ENST00000540906 ISCUQ9H1K1 167 aa13.17□□□□□ -0.3
AP003559.1-201ENST00000540906 SRRDQ9UH36 339 aa13.17□□□□□ -0.3
AP003559.1-201ENST00000540906 SNX12Q9UMY4 172 aa13.17□□□□□ -0.3
AP003559.1-201ENST00000540906 PCDHB4Q9Y5E5 795 aa13.17□□□□□ -0.3
AP003559.1-201ENST00000540906 SAR1BQ9Y6B6 198 aa13.17□□□□□ -0.3
AP003559.1-201ENST00000540906 MROH7Q68CQ1 1323 aa13.16□□□□□ -0.3
AP003559.1-201ENST00000540906 ANO9A1A5B4 782 aa13.16□□□□□ -0.3
AP003559.1-201ENST00000540906 CLSTN1O94985 981 aa13.16□□□□□ -0.3
AP003559.1-201ENST00000540906 FTLP02792 175 aaPredicted RBP13.16□□□□□ -0.3
AP003559.1-201ENST00000540906 MYCNP04198 464 aaPredicted RBP13.16□□□□□ -0.3
AP003559.1-201ENST00000540906 RARBP10826 455 aa13.16□□□□□ -0.3
AP003559.1-201ENST00000540906 ZSCAN20P17040 1043 aaPredicted RBP13.16□□□□□ -0.3
AP003559.1-201ENST00000540906 ASPAP45381 313 aa13.16□□□□□ -0.3
AP003559.1-201ENST00000540906 DNA2P51530 1060 aa13.16□□□□□ -0.3
AP003559.1-201ENST00000540906 SURF1Q15526 300 aa13.16□□□□□ -0.3
AP003559.1-201ENST00000540906 UBXN11Q5T124 520 aa13.16□□□□□ -0.3
AP003559.1-201ENST00000540906 CCSAPQ6IQ19 270 aaPredicted RBP13.16□□□□□ -0.3
AP003559.1-201ENST00000540906 TMEM270Q6UE05 265 aa13.16□□□□□ -0.3
AP003559.1-201ENST00000540906 ENOSF1Q7L5Y1 443 aa13.16□□□□□ -0.3
AP003559.1-201ENST00000540906 RBBP8NLQ8NC74 664 aaPredicted RBP13.16□□□□□ -0.3
AP003559.1-201ENST00000540906 ZMAT2Q96NC0 199 aaKnown RBP13.16□□□□□ -0.3
AP003559.1-201ENST00000540906 ZSWIM1Q9BR11 485 aa13.16□□□□□ -0.3
AP003559.1-201ENST00000540906 KATNAL1Q9BW62 490 aa13.16□□□□□ -0.3
AP003559.1-201ENST00000540906 SDCBP2Q9H190 292 aa13.16□□□□□ -0.3
AP003559.1-201ENST00000540906 LUC7LQ9NQ29 371 aaKnown RBP13.16□□□□□ -0.3
AP003559.1-201ENST00000540906 XPNPEP3Q9NQH7 507 aa13.16□□□□□ -0.3
AP003559.1-201ENST00000540906 SNTG2Q9NY99 539 aa13.16□□□□□ -0.3
AP003559.1-201ENST00000540906 INTUQ9ULD6 942 aa13.16□□□□□ -0.3
AP003559.1-201ENST00000540906 CNTN6Q9UQ52 1028 aa13.16□□□□□ -0.3
AP003559.1-201ENST00000540906 JRKLQ9Y4A0 524 aa13.16□□□□□ -0.3
AP003559.1-201ENST00000540906 RALGAPA2Q2PPJ7 1873 aa13.16□□□□□ -0.3
AP003559.1-201ENST00000540906 IL18RAPO95256 599 aa13.16□□□□□ -0.3
AP003559.1-201ENST00000540906 WEE2P0C1S8 567 aa13.16□□□□□ -0.3
AP003559.1-201ENST00000540906 CD58P19256 250 aa13.16□□□□□ -0.3
AP003559.1-201ENST00000540906 EIF4BP23588 611 aaKnown RBP13.16□□□□□ -0.3
AP003559.1-201ENST00000540906 GRM5P41594 1212 aa13.16□□□□□ -0.3
AP003559.1-201ENST00000540906 NOP2P46087 812 aaKnown RBP13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms