RNA–Protein interactions for RNA: ENST00000540891.1

CD9-209, Transcript of CD9 molecule, humanhuman

TSL 3

Gene CD9, Length 642 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD9-209ENST00000540891 S1PR5Q9H228 398 aa18.38■□□□□ 0.53
CD9-209ENST00000540891 I3L4J1 428 aa18.37■□□□□ 0.53
CD9-209ENST00000540891 EIF3DO15371 548 aaKnown RBP eCLIP18.37■□□□□ 0.53
CD9-209ENST00000540891 PRR29P0C7W0 189 aa18.37■□□□□ 0.53
CD9-209ENST00000540891 GARTP22102 1010 aa18.37■□□□□ 0.53
CD9-209ENST00000540891 FGFR3P22607 806 aa18.37■□□□□ 0.53
CD9-209ENST00000540891 KLRC2P26717 231 aa18.37■□□□□ 0.53
CD9-209ENST00000540891 LRPAP1P30533 357 aa18.37■□□□□ 0.53
CD9-209ENST00000540891 RPL9P32969 192 aaKnown RBP18.37■□□□□ 0.53
CD9-209ENST00000540891 GUCY2FP51841 1108 aa18.37■□□□□ 0.53
CD9-209ENST00000540891 WNT7BP56706 349 aa18.37■□□□□ 0.53
CD9-209ENST00000540891 SMAD2Q15796 467 aaKnown RBP18.37■□□□□ 0.53
CD9-209ENST00000540891 JADE1Q6IE81 842 aa18.37■□□□□ 0.53
CD9-209ENST00000540891 PRSS55Q6UWB4 352 aaPredicted RBP18.37■□□□□ 0.53
CD9-209ENST00000540891 TMEM87AQ8NBN3 555 aa18.37■□□□□ 0.53
CD9-209ENST00000540891 LNX1Q8TBB1 728 aaPredicted RBP18.37■□□□□ 0.53
CD9-209ENST00000540891 PIK3R5Q8WYR1 880 aa18.37■□□□□ 0.53
CD9-209ENST00000540891 SAAL1Q96ER3 474 aa18.37■□□□□ 0.53
CD9-209ENST00000540891 TTPALQ9BTX7 342 aa18.37■□□□□ 0.53
CD9-209ENST00000540891 CIZ1Q9ULV3 898 aaPredicted RBP18.37■□□□□ 0.53
CD9-209ENST00000540891 UBQLN1Q9UMX0 589 aaKnown RBP18.37■□□□□ 0.53
CD9-209ENST00000540891 VWA8A3KMH1 1905 aa18.37■□□□□ 0.53
CD9-209ENST00000540891 NFICP08651 508 aa18.36■□□□□ 0.53
CD9-209ENST00000540891 SRGAP2BP0DMP2 458 aa18.36■□□□□ 0.53
CD9-209ENST00000540891 RPL17P18621 184 aaKnown RBP18.36■□□□□ 0.53
CD9-209ENST00000540891 CYP3A5P20815 502 aa18.36■□□□□ 0.53
CD9-209ENST00000540891 POU5F1Q01860 360 aaKnown RBP18.36■□□□□ 0.53
CD9-209ENST00000540891 ELAVL2Q12926 359 aaKnown RBP18.36■□□□□ 0.53
CD9-209ENST00000540891 PDZRN4Q6ZMN7 1036 aaPredicted RBP18.36■□□□□ 0.53
CD9-209ENST00000540891 KRBA2Q6ZNG9 492 aa18.36■□□□□ 0.53
CD9-209ENST00000540891 STXBP4Q6ZWJ1 553 aa18.36■□□□□ 0.53
CD9-209ENST00000540891 PPFIBP1Q86W92 1011 aa18.36■□□□□ 0.53
CD9-209ENST00000540891 CEP57Q86XR8 500 aa18.36■□□□□ 0.53
CD9-209ENST00000540891 CD302Q8IX05 232 aa18.36■□□□□ 0.53
CD9-209ENST00000540891 FEZF2Q8TBJ5 459 aa18.36■□□□□ 0.53
CD9-209ENST00000540891 SUSD6Q92537 303 aa18.36■□□□□ 0.53
CD9-209ENST00000540891 FAM212AQ96EL1 285 aa18.36■□□□□ 0.53
CD9-209ENST00000540891 FAM213AQ9BRX8 229 aa18.36■□□□□ 0.53
CD9-209ENST00000540891 APOL5Q9BWW9 433 aa18.36■□□□□ 0.53
CD9-209ENST00000540891 SLC39A2Q9NP94 309 aa18.36■□□□□ 0.53
CD9-209ENST00000540891 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP18.36■□□□□ 0.53
CD9-209ENST00000540891 FNIP2Q9P278 1114 aa18.36■□□□□ 0.53
CD9-209ENST00000540891 USP15Q9Y4E8 981 aaPredicted RBP18.36■□□□□ 0.53
CD9-209ENST00000540891 ANK1P16157 1881 aa18.35■□□□□ 0.53
CD9-209ENST00000540891 TGFB1I1O43294 461 aa18.35■□□□□ 0.53
CD9-209ENST00000540891 ZNF202O95125 648 aa18.35■□□□□ 0.53
CD9-209ENST00000540891 ADH1AP07327 375 aa18.35■□□□□ 0.53
CD9-209ENST00000540891 HOXB8P17481 243 aaPredicted RBP18.35■□□□□ 0.53
CD9-209ENST00000540891 TKTP29401 623 aaKnown RBP18.35■□□□□ 0.53
CD9-209ENST00000540891 BMT2Q1RMZ1 405 aa18.35■□□□□ 0.53
CD9-209ENST00000540891 KMT5BQ4FZB7 885 aa18.35■□□□□ 0.53
CD9-209ENST00000540891 SPATA1Q5VX52 437 aa18.35■□□□□ 0.53
CD9-209ENST00000540891 KANK3Q6NY19 840 aa18.35■□□□□ 0.53
CD9-209ENST00000540891 KIAA0895Q8NCT3 520 aa18.35■□□□□ 0.53
CD9-209ENST00000540891 TSPAN18Q96SJ8 248 aa18.35■□□□□ 0.53
CD9-209ENST00000540891 CLSTN3Q9BQT9 956 aa18.35■□□□□ 0.53
CD9-209ENST00000540891 PCIF1Q9H4Z3 704 aa18.35■□□□□ 0.53
CD9-209ENST00000540891 ASB7Q9H672 318 aa18.35■□□□□ 0.53
CD9-209ENST00000540891 CD320Q9NPF0 282 aa18.35■□□□□ 0.53
CD9-209ENST00000540891 CDH22Q9UJ99 828 aa18.35■□□□□ 0.53
CD9-209ENST00000540891 MUC3AQ02505 3323 aa18.35■□□□□ 0.53
CD9-209ENST00000540891 UBE4BO95155 1302 aa18.34■□□□□ 0.53
CD9-209ENST00000540891 GOLGA8IPA6NC78 632 aa18.34■□□□□ 0.53
CD9-209ENST00000540891 GOLGA8JA6NMD2 632 aa18.34■□□□□ 0.53
CD9-209ENST00000540891 PPEF2O14830 753 aa18.34■□□□□ 0.53
CD9-209ENST00000540891 MYL1P05976 194 aa18.34■□□□□ 0.53
CD9-209ENST00000540891 STK4Q13043 487 aa18.34■□□□□ 0.53
CD9-209ENST00000540891 PSMD5Q16401 504 aa18.34■□□□□ 0.53
CD9-209ENST00000540891 ARMCX5Q6P1M9 558 aa18.34■□□□□ 0.53
CD9-209ENST00000540891 RSPO2Q6UXX9 243 aaPredicted RBP18.34■□□□□ 0.53
CD9-209ENST00000540891 BRSK2Q8IWQ3 736 aa18.34■□□□□ 0.53
CD9-209ENST00000540891 EFCAB13Q8IY85 973 aa18.34■□□□□ 0.53
CD9-209ENST00000540891 FMR1NBQ8N0W7 255 aaPredicted RBP18.34■□□□□ 0.53
CD9-209ENST00000540891 C12orf76Q8N812 135 aaPredicted RBP18.34■□□□□ 0.53
CD9-209ENST00000540891 FBXL18Q96ME1 805 aa18.34■□□□□ 0.53
CD9-209ENST00000540891 DZANK1Q9NVP4 752 aa18.34■□□□□ 0.53
CD9-209ENST00000540891 FAM50BQ9Y247 325 aa18.34■□□□□ 0.53
CD9-209ENST00000540891 DERAQ9Y315 318 aa18.34■□□□□ 0.53
CD9-209ENST00000540891 PLXNA3P51805 1871 aa18.34■□□□□ 0.53
CD9-209ENST00000540891 ADAM12O43184 909 aa18.33■□□□□ 0.52
CD9-209ENST00000540891 TRAPPC3O43617 180 aa18.33■□□□□ 0.52
CD9-209ENST00000540891 EXTL3O43909 919 aa18.33■□□□□ 0.52
CD9-209ENST00000540891 ZP2Q05996 745 aa18.33■□□□□ 0.52
CD9-209ENST00000540891 DPYDQ12882 1025 aa18.33■□□□□ 0.52
CD9-209ENST00000540891 SNW1Q13573 536 aaKnown RBP18.33■□□□□ 0.52
CD9-209ENST00000540891 TMEM132DQ14C87 1099 aa18.33■□□□□ 0.52
CD9-209ENST00000540891 LILRA6Q6PI73 481 aa18.33■□□□□ 0.52
CD9-209ENST00000540891 GLYCTKQ8IVS8 523 aa18.33■□□□□ 0.52
CD9-209ENST00000540891 NELFCDQ8IXH7 590 aa18.33■□□□□ 0.52
CD9-209ENST00000540891 ENGASEQ8NFI3 743 aa18.33■□□□□ 0.52
CD9-209ENST00000540891 ADAM7Q9H2U9 754 aa18.33■□□□□ 0.52
CD9-209ENST00000540891 AGPAT3Q9NRZ7 376 aa18.33■□□□□ 0.52
CD9-209ENST00000540891 MTRRQ9UBK8 725 aa18.33■□□□□ 0.52
CD9-209ENST00000540891 C2CD2Q9Y426 696 aa18.33■□□□□ 0.52
CD9-209ENST00000540891 NUB1Q9Y5A7 615 aa18.33■□□□□ 0.52
CD9-209ENST00000540891 GTF3C5Q9Y5Q8 519 aaPredicted RBP18.33■□□□□ 0.52
CD9-209ENST00000540891 TTC28Q96AY4 2481 aa18.32■□□□□ 0.52
CD9-209ENST00000540891 TGM5O43548 720 aa18.32■□□□□ 0.52
CD9-209ENST00000540891 XPOTO43592 962 aaKnown RBP18.32■□□□□ 0.52
CD9-209ENST00000540891 LDHAP00338 332 aaKnown RBP18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms