RNA–Protein interactions for RNA: ENST00000540815.2

LGR5-203, Transcript of leucine rich repeat containing G protein-coupled receptor 5, humanhuman

TSL 1 (best) BASIC

Gene LGR5, Length 2,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LGR5-203ENST00000540815 NUP85Q9BW27 656 aa12.11□□□□□ -0.47
LGR5-203ENST00000540815 WNT8AQ9H1J5 351 aa12.11□□□□□ -0.47
LGR5-203ENST00000540815 FAM114A2Q9NRY5 505 aa12.11□□□□□ -0.47
LGR5-203ENST00000540815 UVRAGQ9P2Y5 699 aa12.11□□□□□ -0.47
LGR5-203ENST00000540815 AGO2Q9UKV8 859 aaKnown RBP12.11□□□□□ -0.47
LGR5-203ENST00000540815 CLTAP09496 248 aa12.1□□□□□ -0.47
LGR5-203ENST00000540815 HSPA6P17066 643 aa12.1□□□□□ -0.47
LGR5-203ENST00000540815 COMTP21964 271 aa12.1□□□□□ -0.47
LGR5-203ENST00000540815 UBA1P22314 1058 aaKnown RBP12.1□□□□□ -0.47
LGR5-203ENST00000540815 RFC5P40937 340 aa12.1□□□□□ -0.47
LGR5-203ENST00000540815 SLFN12LQ6IEE8 588 aa12.1□□□□□ -0.47
LGR5-203ENST00000540815 DEPTORQ8TB45 409 aa12.1□□□□□ -0.47
LGR5-203ENST00000540815 ZNF564Q8TBZ8 553 aaPredicted RBP12.1□□□□□ -0.47
LGR5-203ENST00000540815 NSMCE1Q8WV22 266 aa12.1□□□□□ -0.47
LGR5-203ENST00000540815 DHX38Q92620 1227 aaKnown RBP12.1□□□□□ -0.47
LGR5-203ENST00000540815 CD101Q93033 1021 aa12.1□□□□□ -0.47
LGR5-203ENST00000540815 ZNF653Q96CK0 615 aa12.1□□□□□ -0.47
LGR5-203ENST00000540815 LRRC45Q96CN5 670 aa12.1□□□□□ -0.47
LGR5-203ENST00000540815 C1orf112Q9NSG2 853 aa12.1□□□□□ -0.47
LGR5-203ENST00000540815 UTP11Q9Y3A2 253 aaKnown RBP12.1□□□□□ -0.47
LGR5-203ENST00000540815 NR2E1Q9Y466 385 aa12.1□□□□□ -0.47
LGR5-203ENST00000540815 GSTTP1A0A1W2PQM5 241 aa12.1□□□□□ -0.47
LGR5-203ENST00000540815 TMEM110-MUSTN1A8MSY1 372 aa12.1□□□□□ -0.47
LGR5-203ENST00000540815 GRIN3BO60391 1043 aa12.1□□□□□ -0.47
LGR5-203ENST00000540815 DDNO94850 711 aaPredicted RBP12.1□□□□□ -0.47
LGR5-203ENST00000540815 FARP2O94887 1054 aaPredicted RBP12.1□□□□□ -0.47
LGR5-203ENST00000540815 GGPS1O95749 300 aa12.1□□□□□ -0.47
LGR5-203ENST00000540815 C4BPAP04003 597 aaKnown RBP12.1□□□□□ -0.47
LGR5-203ENST00000540815 CTNNA2P26232 953 aa12.1□□□□□ -0.47
LGR5-203ENST00000540815 PEX5P50542 639 aa12.1□□□□□ -0.47
LGR5-203ENST00000540815 NLRP11P59045 1033 aaKnown RBP12.1□□□□□ -0.47
LGR5-203ENST00000540815 ZNF211Q13398 564 aaPredicted RBP12.1□□□□□ -0.47
LGR5-203ENST00000540815 MESDQ14696 234 aa12.1□□□□□ -0.47
LGR5-203ENST00000540815 CLEC16AQ2KHT3 1053 aa12.1□□□□□ -0.47
LGR5-203ENST00000540815 ZACNQ401N2 412 aa12.1□□□□□ -0.47
LGR5-203ENST00000540815 HIBCHQ6NVY1 386 aaPredicted RBP12.1□□□□□ -0.47
LGR5-203ENST00000540815 LRIG3Q6UXM1 1119 aa12.1□□□□□ -0.47
LGR5-203ENST00000540815 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.1□□□□□ -0.47
LGR5-203ENST00000540815 DDX42Q86XP3 938 aaKnown RBP eCLIP12.1□□□□□ -0.47
LGR5-203ENST00000540815 C1orf131Q8NDD1 294 aaKnown RBP12.1□□□□□ -0.47
LGR5-203ENST00000540815 MDM1Q8TC05 714 aa12.1□□□□□ -0.47
LGR5-203ENST00000540815 SLC7A3Q8WY07 619 aa12.1□□□□□ -0.47
LGR5-203ENST00000540815 KRT35Q92764 455 aa12.1□□□□□ -0.47
LGR5-203ENST00000540815 FNBP1Q96RU3 617 aa12.1□□□□□ -0.47
LGR5-203ENST00000540815 PCYT2Q99447 389 aa12.1□□□□□ -0.47
LGR5-203ENST00000540815 PI4K2AQ9BTU6 479 aa12.1□□□□□ -0.47
LGR5-203ENST00000540815 NEUROG2Q9H2A3 272 aa12.1□□□□□ -0.47
LGR5-203ENST00000540815 SLTMQ9NWH9 1034 aaKnown RBP eCLIP12.1□□□□□ -0.47
LGR5-203ENST00000540815 CHORDC1Q9UHD1 332 aaPredicted RBP12.1□□□□□ -0.47
LGR5-203ENST00000540815 TRPC6Q9Y210 931 aa12.1□□□□□ -0.47
LGR5-203ENST00000540815 SOWAHBA6NEL2 793 aa12.1□□□□□ -0.47
LGR5-203ENST00000540815 ADM5C9JUS6 153 aa12.1□□□□□ -0.47
LGR5-203ENST00000540815 ATMINO43313 823 aaPredicted RBP12.1□□□□□ -0.47
LGR5-203ENST00000540815 LDHAP00338 332 aaKnown RBP12.1□□□□□ -0.47
LGR5-203ENST00000540815 KRT5P13647 590 aa12.1□□□□□ -0.47
LGR5-203ENST00000540815 EZRP15311 586 aaKnown RBP12.1□□□□□ -0.47
LGR5-203ENST00000540815 MDH1P40925 334 aaKnown RBP12.1□□□□□ -0.47
LGR5-203ENST00000540815 SKOR1P84550 965 aa12.1□□□□□ -0.47
LGR5-203ENST00000540815 TARBP2Q15633 366 aaKnown RBP12.1□□□□□ -0.47
LGR5-203ENST00000540815 FAM167BQ9BTA0 163 aa12.1□□□□□ -0.47
LGR5-203ENST00000540815 CELF4Q9BZC1 486 aaKnown RBP12.1□□□□□ -0.47
LGR5-203ENST00000540815 HAPLN2Q9GZV7 340 aa12.1□□□□□ -0.47
LGR5-203ENST00000540815 RAB17Q9H0T7 212 aa12.1□□□□□ -0.47
LGR5-203ENST00000540815 TMEM134Q9H6X4 195 aa12.1□□□□□ -0.47
LGR5-203ENST00000540815 ERVK-5Q9HDB9 667 aa12.1□□□□□ -0.47
LGR5-203ENST00000540815 CSADQ9Y600 493 aa12.1□□□□□ -0.47
LGR5-203ENST00000540815 FAM187AA6NFU0 413 aa12.09□□□□□ -0.47
LGR5-203ENST00000540815 LRRIQ4A6NIV6 560 aa12.09□□□□□ -0.47
LGR5-203ENST00000540815 K7ERI5 159 aa12.09□□□□□ -0.47
LGR5-203ENST00000540815 DAPK3O43293 454 aa12.09□□□□□ -0.47
LGR5-203ENST00000540815 EDN1P05305 212 aa12.09□□□□□ -0.47
LGR5-203ENST00000540815 CTNNA1P35221 906 aaKnown RBP12.09□□□□□ -0.47
LGR5-203ENST00000540815 DHX34Q14147 1143 aaKnown RBP12.09□□□□□ -0.47
LGR5-203ENST00000540815 PPP1R7Q15435 360 aa12.09□□□□□ -0.47
LGR5-203ENST00000540815 WDR44Q5JSH3 913 aa12.09□□□□□ -0.47
LGR5-203ENST00000540815 FAM160B1Q5W0V3 765 aa12.09□□□□□ -0.47
LGR5-203ENST00000540815 CRELD2Q6UXH1 353 aaPredicted RBP12.09□□□□□ -0.47
LGR5-203ENST00000540815 ZNF677Q86XU0 584 aa12.09□□□□□ -0.47
LGR5-203ENST00000540815 YIPF3Q9GZM5 350 aa12.09□□□□□ -0.47
LGR5-203ENST00000540815 SPATC1LQ9H0A9 340 aa12.09□□□□□ -0.47
LGR5-203ENST00000540815 NRBP2Q9NSY0 501 aa12.09□□□□□ -0.47
LGR5-203ENST00000540815 CALCAP01258 141 aa12.09□□□□□ -0.47
LGR5-203ENST00000540815 HLA-DRAP01903 254 aa12.09□□□□□ -0.47
LGR5-203ENST00000540815 TNNI1P19237 187 aa12.09□□□□□ -0.47
LGR5-203ENST00000540815 HSD17B3P37058 310 aa12.09□□□□□ -0.47
LGR5-203ENST00000540815 MARCKSL1P49006 195 aa12.09□□□□□ -0.47
LGR5-203ENST00000540815 DR1Q01658 176 aa12.09□□□□□ -0.47
LGR5-203ENST00000540815 ODF2Q5BJF6 829 aa12.09□□□□□ -0.47
LGR5-203ENST00000540815 SEL1L2Q5TEA6 688 aa12.09□□□□□ -0.47
LGR5-203ENST00000540815 TDRD10Q5VZ19 366 aaKnown RBP12.09□□□□□ -0.47
LGR5-203ENST00000540815 TLDC1Q6P9B6 456 aa12.09□□□□□ -0.47
LGR5-203ENST00000540815 PLAAQ9Y263 795 aa12.09□□□□□ -0.47
LGR5-203ENST00000540815 A0A0G2JLL6 359 aaPredicted RBP12.08□□□□□ -0.48
LGR5-203ENST00000540815 PHF2O75151 1096 aa12.08□□□□□ -0.48
LGR5-203ENST00000540815 TGFB3P10600 412 aa12.08□□□□□ -0.48
LGR5-203ENST00000540815 UNGP13051 313 aaPredicted RBP12.08□□□□□ -0.48
LGR5-203ENST00000540815 PIK3CAP42336 1068 aa12.08□□□□□ -0.48
LGR5-203ENST00000540815 SCTRP47872 440 aa12.08□□□□□ -0.48
LGR5-203ENST00000540815 ACOT2P49753 483 aa12.08□□□□□ -0.48
LGR5-203ENST00000540815 MTMR3Q13615 1198 aa12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms