RNA–Protein interactions for RNA: ENST00000540747.1

YBX3-209, Transcript of Y-box binding protein 3, humanhuman

TSL 5

Gene YBX3, Length 548 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-209ENST00000540747 GAS6Q14393 721 aa8.05□□□□□ -1.12
YBX3-209ENST00000540747 MAPK6Q16659 721 aa8.05□□□□□ -1.12
YBX3-209ENST00000540747 DCAF4L1Q3SXM0 396 aa8.05□□□□□ -1.12
YBX3-209ENST00000540747 WDR44Q5JSH3 913 aa8.05□□□□□ -1.12
YBX3-209ENST00000540747 FAM78AQ5JUQ0 283 aa8.05□□□□□ -1.12
YBX3-209ENST00000540747 ANKS3Q6ZW76 656 aa8.05□□□□□ -1.12
YBX3-209ENST00000540747 ZBTB8OSQ8IWT0 167 aa8.05□□□□□ -1.12
YBX3-209ENST00000540747 ZNF461Q8TAF7 563 aa8.05□□□□□ -1.12
YBX3-209ENST00000540747 TCEAL4Q96EI5 215 aa8.05□□□□□ -1.12
YBX3-209ENST00000540747 MCRS1Q96EZ8 462 aa8.05□□□□□ -1.12
YBX3-209ENST00000540747 UROC1Q96N76 676 aa8.05□□□□□ -1.12
YBX3-209ENST00000540747 ASB16Q96NS5 453 aa8.05□□□□□ -1.12
YBX3-209ENST00000540747 RTKNQ9BST9 563 aa8.05□□□□□ -1.12
YBX3-209ENST00000540747 POLR3CQ9BUI4 534 aaPredicted RBP8.05□□□□□ -1.12
YBX3-209ENST00000540747 TRPV4Q9HBA0 871 aa8.05□□□□□ -1.12
YBX3-209ENST00000540747 GOLGA2P5Q9HBQ8 144 aa8.05□□□□□ -1.12
YBX3-209ENST00000540747 PTPRHQ9HD43 1115 aa8.05□□□□□ -1.12
YBX3-209ENST00000540747 ORC3Q9UBD5 711 aaPredicted RBP8.05□□□□□ -1.12
YBX3-209ENST00000540747 POLIQ9UNA4 740 aa8.05□□□□□ -1.12
YBX3-209ENST00000540747 MRPS17Q9Y2R5 130 aaKnown RBP8.05□□□□□ -1.12
YBX3-209ENST00000540747 FAM208BQ5VWN6 2430 aa8.04□□□□□ -1.12
YBX3-209ENST00000540747 ATRXP46100 2492 aa8.04□□□□□ -1.12
YBX3-209ENST00000540747 SMIM28A0A1B0GU29 152 aa8.04□□□□□ -1.12
YBX3-209ENST00000540747 BTBD18B2RXH4 712 aa8.04□□□□□ -1.12
YBX3-209ENST00000540747 I3L4J1 428 aa8.04□□□□□ -1.12
YBX3-209ENST00000540747 SLC30A4O14863 429 aa8.04□□□□□ -1.12
YBX3-209ENST00000540747 NCAM2O15394 837 aa8.04□□□□□ -1.12
YBX3-209ENST00000540747 LRP3O75074 770 aa8.04□□□□□ -1.12
YBX3-209ENST00000540747 PAPSS2O95340 614 aaPredicted RBP8.04□□□□□ -1.12
YBX3-209ENST00000540747 LARGE1O95461 756 aa8.04□□□□□ -1.12
YBX3-209ENST00000540747 SEC24AO95486 1093 aa8.04□□□□□ -1.12
YBX3-209ENST00000540747 ADRB1P08588 477 aa8.04□□□□□ -1.12
YBX3-209ENST00000540747 ATF2P15336 505 aa8.04□□□□□ -1.12
YBX3-209ENST00000540747 PTPN2P17706 415 aa8.04□□□□□ -1.12
YBX3-209ENST00000540747 TXKP42681 527 aa8.04□□□□□ -1.12
YBX3-209ENST00000540747 BRCC3P46736 316 aa8.04□□□□□ -1.12
YBX3-209ENST00000540747 MLLT6P55198 1093 aaPredicted RBP8.04□□□□□ -1.12
YBX3-209ENST00000540747 GLRA4Q5JXX5 417 aa8.04□□□□□ -1.12
YBX3-209ENST00000540747 LAIR1Q6GTX8 287 aa8.04□□□□□ -1.12
YBX3-209ENST00000540747 PADI6Q6TGC4 694 aa8.04□□□□□ -1.12
YBX3-209ENST00000540747 VITQ6UXI7 678 aa8.04□□□□□ -1.12
YBX3-209ENST00000540747 MAEAQ7L5Y9 396 aa8.04□□□□□ -1.12
YBX3-209ENST00000540747 TAS1R3Q7RTX0 852 aa8.04□□□□□ -1.12
YBX3-209ENST00000540747 CEP120Q8N960 986 aa8.04□□□□□ -1.12
YBX3-209ENST00000540747 NSUN7Q8NE18 718 aaKnown RBP8.04□□□□□ -1.12
YBX3-209ENST00000540747 ZSWIM3Q96MP5 696 aa8.04□□□□□ -1.12
YBX3-209ENST00000540747 ZMAT2Q96NC0 199 aaKnown RBP8.04□□□□□ -1.12
YBX3-209ENST00000540747 NACC1Q96RE7 527 aa8.04□□□□□ -1.12
YBX3-209ENST00000540747 KIFC3Q9BVG8 833 aa8.04□□□□□ -1.12
YBX3-209ENST00000540747 CDV3Q9UKY7 258 aaKnown RBP8.04□□□□□ -1.12
YBX3-209ENST00000540747 TNFSF13BQ9Y275 285 aa8.04□□□□□ -1.12
YBX3-209ENST00000540747 GDAQ9Y2T3 454 aa8.04□□□□□ -1.12
YBX3-209ENST00000540747 INSL5Q9Y5Q6 135 aa8.04□□□□□ -1.12
YBX3-209ENST00000540747 LAMA1P25391 3075 aa8.04□□□□□ -1.12
YBX3-209ENST00000540747 IGF2RP11717 2491 aa8.04□□□□□ -1.12
YBX3-209ENST00000540747 TRIP11Q15643 1979 aa8.03□□□□□ -1.12
YBX3-209ENST00000540747 DCDC2BA2VCK2 349 aa8.03□□□□□ -1.12
YBX3-209ENST00000540747 K7ESF4 209 aa8.03□□□□□ -1.12
YBX3-209ENST00000540747 MAN2B1O00754 1011 aa8.03□□□□□ -1.12
YBX3-209ENST00000540747 SYN3O14994 580 aa8.03□□□□□ -1.12
YBX3-209ENST00000540747 TRAPPC3O43617 180 aa8.03□□□□□ -1.12
YBX3-209ENST00000540747 VNN2O95498 520 aa8.03□□□□□ -1.12
YBX3-209ENST00000540747 CHRNB1P11230 501 aa8.03□□□□□ -1.12
YBX3-209ENST00000540747 KCNE1P15382 129 aa8.03□□□□□ -1.12
YBX3-209ENST00000540747 ATP2B1P20020 1258 aa8.03□□□□□ -1.12
YBX3-209ENST00000540747 MUTP22033 750 aa8.03□□□□□ -1.12
YBX3-209ENST00000540747 PROZP22891 400 aa8.03□□□□□ -1.12
YBX3-209ENST00000540747 RPA1P27694 616 aa8.03□□□□□ -1.12
YBX3-209ENST00000540747 GRM5P41594 1212 aa8.03□□□□□ -1.12
YBX3-209ENST00000540747 EFNA5P52803 228 aa8.03□□□□□ -1.12
YBX3-209ENST00000540747 ST3GAL1Q11201 340 aa8.03□□□□□ -1.12
YBX3-209ENST00000540747 GRM2Q14416 872 aa8.03□□□□□ -1.12
YBX3-209ENST00000540747 ECM1Q16610 540 aa8.03□□□□□ -1.12
YBX3-209ENST00000540747 ATF7IP2Q5U623 682 aa8.03□□□□□ -1.12
YBX3-209ENST00000540747 TPGS2Q68CL5 300 aa8.03□□□□□ -1.12
YBX3-209ENST00000540747 DIS3L2Q8IYB7 885 aaKnown RBP8.03□□□□□ -1.12
YBX3-209ENST00000540747 DAW1Q8N136 415 aa8.03□□□□□ -1.12
YBX3-209ENST00000540747 CELF5Q8N6W0 485 aaKnown RBP8.03□□□□□ -1.12
YBX3-209ENST00000540747 BEST2Q8NFU1 509 aa8.03□□□□□ -1.12
YBX3-209ENST00000540747 WASF1Q92558 559 aa8.03□□□□□ -1.12
YBX3-209ENST00000540747 SMARCD2Q92925 531 aa8.03□□□□□ -1.12
YBX3-209ENST00000540747 SECISBP2LQ93073 1101 aaKnown RBP8.03□□□□□ -1.12
YBX3-209ENST00000540747 GTF3C6Q969F1 213 aa8.03□□□□□ -1.12
YBX3-209ENST00000540747 RSPRY1Q96DX4 576 aa8.03□□□□□ -1.12
YBX3-209ENST00000540747 CCDC43Q96MW1 224 aaKnown RBP8.03□□□□□ -1.12
YBX3-209ENST00000540747 ADPGKQ9BRR6 497 aa8.03□□□□□ -1.12
YBX3-209ENST00000540747 LRRC3Q9BY71 257 aa8.03□□□□□ -1.12
YBX3-209ENST00000540747 CDT1Q9H211 546 aa8.03□□□□□ -1.12
YBX3-209ENST00000540747 ZFP14Q9HCL3 533 aa8.03□□□□□ -1.12
YBX3-209ENST00000540747 ZNF334Q9HCZ1 680 aaPredicted RBP8.03□□□□□ -1.12
YBX3-209ENST00000540747 CEP72Q9P209 647 aa8.03□□□□□ -1.12
YBX3-209ENST00000540747 FBXL5Q9UKA1 691 aa8.03□□□□□ -1.12
YBX3-209ENST00000540747 PODXLO00592 558 aa8.02□□□□□ -1.13
YBX3-209ENST00000540747 ZNF197O14709 1029 aa8.02□□□□□ -1.13
YBX3-209ENST00000540747 LRG1P02750 347 aa8.02□□□□□ -1.13
YBX3-209ENST00000540747 RETP07949 1114 aa8.02□□□□□ -1.13
YBX3-209ENST00000540747 PSMC3P17980 439 aa8.02□□□□□ -1.13
YBX3-209ENST00000540747 HOXA6P31267 233 aa8.02□□□□□ -1.13
YBX3-209ENST00000540747 CCR3P51677 355 aa8.02□□□□□ -1.13
YBX3-209ENST00000540747 NRLP54845 237 aa8.02□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms