RNA–Protein interactions for RNA: ENST00000540166.5

DDB1-217, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 3,906 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-217ENST00000540166 CHMP2BQ9UQN3 213 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP9.24□□□□□ -0.93
DDB1-217ENST00000540166 TMEM120BA0PK00 339 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 ATP6V1G1O75348 118 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 ACSL3O95573 720 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 RARAP10276 462 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 TARSP26639 723 aaKnown RBP9.24□□□□□ -0.93
DDB1-217ENST00000540166 CLUL1Q15846 466 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 OLFML2BQ68BL8 750 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 PPP1R21Q6ZMI0 780 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 CCDC65Q8IXS2 484 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 CFAP61Q8NHU2 1237 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 DCAF4Q8WV16 495 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 CCSER1Q9C0I3 900 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 MAGEF1Q9HAY2 307 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 MORF4L1Q9UBU8 362 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 IRS2Q9Y4H2 1338 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 MYH8P13535 1937 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 A6NHS1 94 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 PGK1P00558 417 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 RASA1P20936 1047 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 PTDSS1P48651 473 aaKnown RBP9.24□□□□□ -0.93
DDB1-217ENST00000540166 IFI35P80217 286 aaPredicted RBP9.24□□□□□ -0.93
DDB1-217ENST00000540166 IL17AQ16552 155 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 SLC18A3Q16572 532 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 DCAF17Q5H9S7 520 aaPredicted RBP9.24□□□□□ -0.93
DDB1-217ENST00000540166 MEI1Q5TIA1 1274 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 ANO7Q6IWH7 933 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 TATDN1Q6P1N9 297 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 ALKBH5Q6P6C2 394 aaKnown RBP9.24□□□□□ -0.93
DDB1-217ENST00000540166 MAP7D3Q8IWC1 876 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 PIDD1Q9HB75 910 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 CYP39A1Q9NYL5 469 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 HAO1Q9UJM8 370 aa9.24□□□□□ -0.93
DDB1-217ENST00000540166 TROVE2P10155 538 aaKnown RBP eCLIP9.23□□□□□ -0.93
DDB1-217ENST00000540166 ABCB4P21439 1286 aa9.23□□□□□ -0.93
DDB1-217ENST00000540166 FGFR4P22455 802 aa9.23□□□□□ -0.93
DDB1-217ENST00000540166 MAGEA8P43361 318 aa9.23□□□□□ -0.93
DDB1-217ENST00000540166 USP11P51784 963 aa9.23□□□□□ -0.93
DDB1-217ENST00000540166 SFSWAPQ12872 951 aaKnown RBP9.23□□□□□ -0.93
DDB1-217ENST00000540166 KPNB1Q14974 876 aaKnown RBP9.23□□□□□ -0.93
DDB1-217ENST00000540166 Q3C1V9 767 aa9.23□□□□□ -0.93
DDB1-217ENST00000540166 TBC1D25Q3MII6 688 aa9.23□□□□□ -0.93
DDB1-217ENST00000540166 CCDC92Q53HC0 331 aaPredicted RBP9.23□□□□□ -0.93
DDB1-217ENST00000540166 C10orf76Q5T2E6 689 aa9.23□□□□□ -0.93
DDB1-217ENST00000540166 GALNT17Q6IS24 598 aa9.23□□□□□ -0.93
DDB1-217ENST00000540166 FAM192AQ9GZU8 254 aa9.23□□□□□ -0.93
DDB1-217ENST00000540166 NT5C3AQ9H0P0 336 aa9.23□□□□□ -0.93
DDB1-217ENST00000540166 CEP72Q9P209 647 aa9.23□□□□□ -0.93
DDB1-217ENST00000540166 ATXN10Q9UBB4 475 aa9.23□□□□□ -0.93
DDB1-217ENST00000540166 ZNF711Q9Y462 761 aa9.23□□□□□ -0.93
DDB1-217ENST00000540166 TRPM7Q96QT4 1865 aa9.23□□□□□ -0.93
DDB1-217ENST00000540166 PJA2O43164 708 aa9.23□□□□□ -0.93
DDB1-217ENST00000540166 THAP12O43422 761 aa9.23□□□□□ -0.93
DDB1-217ENST00000540166 ACTN1P12814 892 aa9.23□□□□□ -0.93
DDB1-217ENST00000540166 XRCC5P13010 732 aaKnown RBP9.23□□□□□ -0.93
DDB1-217ENST00000540166 KRT15P19012 456 aa9.23□□□□□ -0.93
DDB1-217ENST00000540166 MARK3P27448 753 aa9.23□□□□□ -0.93
DDB1-217ENST00000540166 SERPINB3P29508 390 aa9.23□□□□□ -0.93
DDB1-217ENST00000540166 ADAM9Q13443 819 aa9.23□□□□□ -0.93
DDB1-217ENST00000540166 UAP1Q16222 522 aaPredicted RBP9.23□□□□□ -0.93
DDB1-217ENST00000540166 CCL14Q16627 93 aa9.23□□□□□ -0.93
DDB1-217ENST00000540166 TRMT1LQ7Z2T5 733 aaKnown RBP9.23□□□□□ -0.93
DDB1-217ENST00000540166 UBL4BQ8N7F7 174 aa9.23□□□□□ -0.93
DDB1-217ENST00000540166 ANKLE1Q8NAG6 615 aa9.23□□□□□ -0.93
DDB1-217ENST00000540166 TCHPQ9BT92 498 aa9.23□□□□□ -0.93
DDB1-217ENST00000540166 EDEM3Q9BZQ6 932 aa9.23□□□□□ -0.93
DDB1-217ENST00000540166 TSPYL2Q9H2G4 693 aaPredicted RBP9.23□□□□□ -0.93
DDB1-217ENST00000540166 ABHD16BQ9H3Z7 469 aa9.23□□□□□ -0.93
DDB1-217ENST00000540166 LMCD1Q9NZU5 365 aa9.23□□□□□ -0.93
DDB1-217ENST00000540166 ANGPTL2Q9UKU9 493 aa9.23□□□□□ -0.93
DDB1-217ENST00000540166 PCDHA6Q9UN73 950 aa9.23□□□□□ -0.93
DDB1-217ENST00000540166 PCDHA8Q9Y5H6 950 aa9.23□□□□□ -0.93
DDB1-217ENST00000540166 PFASO15067 1338 aa9.23□□□□□ -0.93
DDB1-217ENST00000540166 SCN9AQ15858 1988 aa9.23□□□□□ -0.93
DDB1-217ENST00000540166 KIAA1551Q9HCM1 1747 aa9.23□□□□□ -0.93
DDB1-217ENST00000540166 VWA5AO00534 786 aa9.23□□□□□ -0.93
DDB1-217ENST00000540166 CACNB2Q08289 660 aaPredicted RBP9.23□□□□□ -0.93
DDB1-217ENST00000540166 TTLL4Q14679 1199 aa9.23□□□□□ -0.93
DDB1-217ENST00000540166 RCN1Q15293 331 aa9.23□□□□□ -0.93
DDB1-217ENST00000540166 Q4G0T1 1027 aa9.23□□□□□ -0.93
DDB1-217ENST00000540166 LBX2Q6XYB7 198 aa9.23□□□□□ -0.93
DDB1-217ENST00000540166 PIGWQ7Z7B1 504 aa9.23□□□□□ -0.93
DDB1-217ENST00000540166 CEP70Q8NHQ1 597 aa9.23□□□□□ -0.93
DDB1-217ENST00000540166 SNRNP27Q8WVK2 155 aaKnown RBP9.23□□□□□ -0.93
DDB1-217ENST00000540166 PGM2Q96G03 612 aa9.23□□□□□ -0.93
DDB1-217ENST00000540166 ARMCX3Q9UH62 379 aaPredicted RBP9.23□□□□□ -0.93
DDB1-217ENST00000540166 FAF1Q9UNN5 650 aaPredicted RBP9.23□□□□□ -0.93
DDB1-217ENST00000540166 GYG2O15488 501 aa9.22□□□□□ -0.93
DDB1-217ENST00000540166 ECEL1O95672 775 aa9.22□□□□□ -0.93
DDB1-217ENST00000540166 FKBP3Q00688 224 aaKnown RBP9.22□□□□□ -0.93
DDB1-217ENST00000540166 BNIP1Q12981 228 aa9.22□□□□□ -0.93
DDB1-217ENST00000540166 EPS8L3Q8TE67 593 aaKnown RBP9.22□□□□□ -0.93
DDB1-217ENST00000540166 DUSP9Q99956 384 aaKnown RBP9.22□□□□□ -0.93
DDB1-217ENST00000540166 SYT15Q9BQS2 421 aa9.22□□□□□ -0.93
DDB1-217ENST00000540166 DDX60Q8IY21 1712 aaKnown RBP9.22□□□□□ -0.93
DDB1-217ENST00000540166 SEPT4O43236 478 aa9.22□□□□□ -0.93
DDB1-217ENST00000540166 IGFBP4P22692 258 aa9.22□□□□□ -0.93
DDB1-217ENST00000540166 FLT3P36888 993 aa9.22□□□□□ -0.93
DDB1-217ENST00000540166 KCNMA1Q12791 1236 aa9.22□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms