RNA–Protein interactions for RNA: ENST00000539935.6

CACNB4-210, Transcript of calcium voltage-gated channel auxiliary subunit beta 4, humanhuman

TSL 1 (best) BASIC

Gene CACNB4, Length 8,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4-210ENST00000539935 LAMB3Q13751 1172 aa13.46□□□□□ -0.26
CACNB4-210ENST00000539935 VEPH1Q14D04 833 aa13.46□□□□□ -0.26
CACNB4-210ENST00000539935 DUOXA2Q1HG44 320 aa13.46□□□□□ -0.26
CACNB4-210ENST00000539935 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.46□□□□□ -0.262e-7■■■■□ 19.7
CACNB4-210ENST00000539935 FEM1BQ9UK73 627 aa13.46□□□□□ -0.26
CACNB4-210ENST00000539935 GPR1P46091 355 aa13.46□□□□□ -0.26
CACNB4-210ENST00000539935 ARF5P84085 180 aa13.46□□□□□ -0.26
CACNB4-210ENST00000539935 TTLL4Q14679 1199 aa13.46□□□□□ -0.26
CACNB4-210ENST00000539935 AASDHQ4L235 1098 aaPredicted RBP13.46□□□□□ -0.26
CACNB4-210ENST00000539935 DNAL1Q4LDG9 190 aa13.46□□□□□ -0.26
CACNB4-210ENST00000539935 SYDE1Q6ZW31 735 aaPredicted RBP13.46□□□□□ -0.26
CACNB4-210ENST00000539935 TNIP2Q8NFZ5 429 aa13.46□□□□□ -0.26
CACNB4-210ENST00000539935 DDX47Q9H0S4 455 aaKnown RBP13.46□□□□□ -0.26
CACNB4-210ENST00000539935 PSD3Q9NYI0 1048 aa13.46□□□□□ -0.26
CACNB4-210ENST00000539935 ANKRD40Q6AI12 368 aa13.45□□□□□ -0.26
CACNB4-210ENST00000539935 C16orf89Q6UX73 402 aa13.45□□□□□ -0.26
CACNB4-210ENST00000539935 TMC5Q6UXY8 1006 aa13.45□□□□□ -0.26
CACNB4-210ENST00000539935 BTN2A1Q7KYR7 527 aa13.45□□□□□ -0.26
CACNB4-210ENST00000539935 CLEC4MQ9H2X3 399 aaPredicted RBP13.45□□□□□ -0.26
CACNB4-210ENST00000539935 INTS13Q9NVM9 706 aa13.45□□□□□ -0.26
CACNB4-210ENST00000539935 GTF2A1LQ9UNN4 478 aa13.45□□□□□ -0.26
CACNB4-210ENST00000539935 KCNQ4P56696 695 aa13.45□□□□□ -0.26
CACNB4-210ENST00000539935 PDAP1Q13442 181 aaKnown RBP13.45□□□□□ -0.26
CACNB4-210ENST00000539935 CBFBQ13951 182 aa13.45□□□□□ -0.26
CACNB4-210ENST00000539935 CCDC144BQ3MJ40 725 aa13.45□□□□□ -0.26
CACNB4-210ENST00000539935 PRMT1Q99873 361 aaKnown RBP13.45□□□□□ -0.26
CACNB4-210ENST00000539935 SEC31BQ9NQW1 1179 aa13.45□□□□□ -0.26
CACNB4-210ENST00000539935 KDM5CP41229 1560 aa13.45□□□□□ -0.26
CACNB4-210ENST00000539935 CYP2D7A0A087X1C5 515 aa13.45□□□□□ -0.26
CACNB4-210ENST00000539935 MYCP01106 439 aaPredicted RBP13.45□□□□□ -0.26
CACNB4-210ENST00000539935 HIST1H2AGP0C0S8 130 aaPredicted RBP13.45□□□□□ -0.26
CACNB4-210ENST00000539935 HIST1H2ADP20671 130 aa13.45□□□□□ -0.26
CACNB4-210ENST00000539935 NRG3P56975 720 aa13.45□□□□□ -0.26
CACNB4-210ENST00000539935 CDK17Q00537 523 aa13.45□□□□□ -0.26
CACNB4-210ENST00000539935 PUDPQ08623 228 aa13.45□□□□□ -0.26
CACNB4-210ENST00000539935 TRIM25Q14258 630 aaKnown RBP13.45□□□□□ -0.26
CACNB4-210ENST00000539935 ALFQ53S48 1182 aa13.45□□□□□ -0.26
CACNB4-210ENST00000539935 MDM1Q8TC05 714 aa13.45□□□□□ -0.26
CACNB4-210ENST00000539935 TMA16Q96EY4 203 aaKnown RBP13.45□□□□□ -0.26
CACNB4-210ENST00000539935 HIST1H2AHQ96KK5 128 aa13.45□□□□□ -0.26
CACNB4-210ENST00000539935 HIST1H2AJQ99878 128 aa13.45□□□□□ -0.26
CACNB4-210ENST00000539935 H2AFJQ9BTM1 129 aa13.45□□□□□ -0.26
CACNB4-210ENST00000539935 ANTXR1Q9H6X2 564 aa13.45□□□□□ -0.26
CACNB4-210ENST00000539935 MAP3K20Q9NYL2 800 aaKnown RBP13.45□□□□□ -0.26
CACNB4-210ENST00000539935 ARL2BPQ9Y2Y0 163 aa13.45□□□□□ -0.26
CACNB4-210ENST00000539935 STK36Q9NRP7 1315 aa13.45□□□□□ -0.26
CACNB4-210ENST00000539935 TRIM49BA6NDI0 452 aa13.45□□□□□ -0.26
CACNB4-210ENST00000539935 PLEKHA8P1O95397 391 aa13.45□□□□□ -0.26
CACNB4-210ENST00000539935 KLC1Q07866 573 aa13.45□□□□□ -0.26
CACNB4-210ENST00000539935 SEMA3FQ13275 785 aa13.45□□□□□ -0.26
CACNB4-210ENST00000539935 SLC16A4O15374 487 aa13.45□□□□□ -0.26
CACNB4-210ENST00000539935 PLIN5Q00G26 463 aa13.45□□□□□ -0.26
CACNB4-210ENST00000539935 GTF2H3Q13889 308 aa13.45□□□□□ -0.26
CACNB4-210ENST00000539935 PPP1R18Q6NYC8 613 aa13.45□□□□□ -0.26
CACNB4-210ENST00000539935 DYNC1LI1Q9Y6G9 523 aaKnown RBP13.45□□□□□ -0.26
CACNB4-210ENST00000539935 PSMA4P25789 261 aaKnown RBP13.45□□□□□ -0.26
CACNB4-210ENST00000539935 COBLL1Q53SF7 1204 aa13.45□□□□□ -0.26
CACNB4-210ENST00000539935 BTBD8Q5XKL5 378 aa13.45□□□□□ -0.26
CACNB4-210ENST00000539935 FAM129AQ9BZQ8 928 aa13.45□□□□□ -0.26
CACNB4-210ENST00000539935 ZCWPW1Q9H0M4 648 aa13.45□□□□□ -0.26
CACNB4-210ENST00000539935 FANCEQ9HB96 536 aa13.45□□□□□ -0.26
CACNB4-210ENST00000539935 AP3M2P53677 418 aa13.45□□□□□ -0.26
CACNB4-210ENST00000539935 CYLC2Q14093 348 aaPredicted RBP13.45□□□□□ -0.26
CACNB4-210ENST00000539935 RFFLQ8WZ73 363 aa13.45□□□□□ -0.26
CACNB4-210ENST00000539935 CMTM5Q96DZ9 223 aa13.45□□□□□ -0.26
CACNB4-210ENST00000539935 CARD9Q9H257 536 aa13.45□□□□□ -0.26
CACNB4-210ENST00000539935 RBAKQ9NYW8 714 aaPredicted RBP13.45□□□□□ -0.26
CACNB4-210ENST00000539935 KCNN4O15554 427 aa13.44□□□□□ -0.26
CACNB4-210ENST00000539935 GH2P01242 217 aa13.44□□□□□ -0.26
CACNB4-210ENST00000539935 QARSP47897 775 aaKnown RBP13.44□□□□□ -0.26
CACNB4-210ENST00000539935 EIF3EP60228 445 aaKnown RBP13.44□□□□□ -0.26
CACNB4-210ENST00000539935 DMPKQ09013 629 aa13.44□□□□□ -0.26
CACNB4-210ENST00000539935 UGP2Q16851 508 aa13.44□□□□□ -0.26
CACNB4-210ENST00000539935 SYTL3Q4VX76 610 aa13.44□□□□□ -0.26
CACNB4-210ENST00000539935 PID1Q7Z2X4 250 aa13.44□□□□□ -0.26
CACNB4-210ENST00000539935 TAF8Q7Z7C8 310 aa13.44□□□□□ -0.26
CACNB4-210ENST00000539935 UXS1Q8NBZ7 420 aa13.44□□□□□ -0.26
CACNB4-210ENST00000539935 AIFM3Q96NN9 605 aa13.44□□□□□ -0.26
CACNB4-210ENST00000539935 SLC1A1P43005 524 aa13.44□□□□□ -0.26
CACNB4-210ENST00000539935 PWP1Q13610 501 aa13.44□□□□□ -0.26
CACNB4-210ENST00000539935 TMED8Q6PL24 325 aaPredicted RBP13.44□□□□□ -0.26
CACNB4-210ENST00000539935 TRIM39Q9HCM9 518 aa13.44□□□□□ -0.26
CACNB4-210ENST00000539935 SNPHO15079 494 aa13.44□□□□□ -0.26
CACNB4-210ENST00000539935 PSMD3O43242 534 aa13.44□□□□□ -0.26
CACNB4-210ENST00000539935 ATP9BO43861 1147 aa13.44□□□□□ -0.26
CACNB4-210ENST00000539935 PFKFB3Q16875 520 aaPredicted RBP13.44□□□□□ -0.26
CACNB4-210ENST00000539935 SPATA21Q7Z572 469 aa13.44□□□□□ -0.26
CACNB4-210ENST00000539935 PIGUQ9H490 435 aa13.44□□□□□ -0.26
CACNB4-210ENST00000539935 PVALEFA0A1B0GWK0 134 aa13.44□□□□□ -0.26
CACNB4-210ENST00000539935 ESYT3A0FGR9 886 aa13.44□□□□□ -0.26
CACNB4-210ENST00000539935 APRTP07741 180 aa13.44□□□□□ -0.26
CACNB4-210ENST00000539935 SOX6P35712 828 aa13.44□□□□□ -0.26
CACNB4-210ENST00000539935 TPI1P60174 286 aa13.44□□□□□ -0.26
CACNB4-210ENST00000539935 ZNF746Q6NUN9 644 aaPredicted RBP13.44□□□□□ -0.26
CACNB4-210ENST00000539935 COA1Q9GZY4 146 aa13.44□□□□□ -0.26
CACNB4-210ENST00000539935 SYNMO15061 1565 aa13.44□□□□□ -0.26
CACNB4-210ENST00000539935 ERVV-1B6SEH8 477 aa13.44□□□□□ -0.26
CACNB4-210ENST00000539935 FAM45BPQ6NSW5 357 aa13.44□□□□□ -0.26
CACNB4-210ENST00000539935 NSUN6Q8TEA1 469 aaKnown RBP13.44□□□□□ -0.26
CACNB4-210ENST00000539935 REXO4Q9GZR2 422 aaKnown RBP13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms