RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 ZNF711Q9Y462 761 aa13.4□□□□□ -0.26
DDX55-206ENST00000539934 PCDHA1Q9Y5I3 950 aa13.4□□□□□ -0.26
DDX55-206ENST00000539934 MYH7BA7E2Y1 1941 aa13.4□□□□□ -0.26
DDX55-206ENST00000539934 IKBKBO14920 756 aa13.4□□□□□ -0.26
DDX55-206ENST00000539934 HAT1O14929 419 aa13.4□□□□□ -0.26
DDX55-206ENST00000539934 PRKACBP22694 351 aa13.4□□□□□ -0.26
DDX55-206ENST00000539934 ETFBP38117 255 aa13.4□□□□□ -0.26
DDX55-206ENST00000539934 UBA7P41226 1012 aa13.4□□□□□ -0.26
DDX55-206ENST00000539934 ACADVLP49748 655 aa13.4□□□□□ -0.26
DDX55-206ENST00000539934 MXI1P50539 228 aa13.4□□□□□ -0.26
DDX55-206ENST00000539934 SPIDRQ14159 915 aa13.4□□□□□ -0.26
DDX55-206ENST00000539934 NOL9Q5SY16 702 aaKnown RBP13.4□□□□□ -0.26
DDX55-206ENST00000539934 NCAPH2Q6IBW4 605 aa13.4□□□□□ -0.26
DDX55-206ENST00000539934 CAPN12Q6ZSI9 719 aa13.4□□□□□ -0.26
DDX55-206ENST00000539934 FASTKD5Q7L8L6 764 aaKnown RBP13.4□□□□□ -0.26
DDX55-206ENST00000539934 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.4□□□□□ -0.26
DDX55-206ENST00000539934 SPICE1Q8N0Z3 855 aa13.4□□□□□ -0.26
DDX55-206ENST00000539934 TOR1AIP2Q8NFQ8 470 aa13.4□□□□□ -0.26
DDX55-206ENST00000539934 NELL1Q92832 810 aa13.4□□□□□ -0.26
DDX55-206ENST00000539934 FGD4Q96M96 766 aa13.4□□□□□ -0.26
DDX55-206ENST00000539934 GRIN2DO15399 1336 aa13.39□□□□□ -0.27
DDX55-206ENST00000539934 A6NJR5 290 aa13.39□□□□□ -0.27
DDX55-206ENST00000539934 POLE2P56282 527 aa13.39□□□□□ -0.27
DDX55-206ENST00000539934 MYL5Q02045 173 aa13.39□□□□□ -0.27
DDX55-206ENST00000539934 ADAM9Q13443 819 aa13.39□□□□□ -0.27
DDX55-206ENST00000539934 KARSQ15046 597 aaKnown RBP13.39□□□□□ -0.27
DDX55-206ENST00000539934 DEPDC1Q5TB30 811 aa13.39□□□□□ -0.27
DDX55-206ENST00000539934 SYDE2Q5VT97 1194 aa13.39□□□□□ -0.27
DDX55-206ENST00000539934 SH3RF1Q7Z6J0 888 aa13.39□□□□□ -0.27
DDX55-206ENST00000539934 CHPFQ8IZ52 775 aa13.39□□□□□ -0.27
DDX55-206ENST00000539934 IFT43Q96FT9 208 aa13.39□□□□□ -0.27
DDX55-206ENST00000539934 ATAD5Q96QE3 1844 aa13.39□□□□□ -0.27
DDX55-206ENST00000539934 TACC1O75410 805 aa13.39□□□□□ -0.27
DDX55-206ENST00000539934 S100A6P06703 90 aa13.39□□□□□ -0.27
DDX55-206ENST00000539934 BMP6P22004 513 aa13.39□□□□□ -0.27
DDX55-206ENST00000539934 STAT3P40763 770 aa13.39□□□□□ -0.27
DDX55-206ENST00000539934 ETF1P62495 437 aaKnown RBP13.39□□□□□ -0.27
DDX55-206ENST00000539934 MORC3Q14149 939 aa13.39□□□□□ -0.27
DDX55-206ENST00000539934 NCAPHQ15003 741 aa13.39□□□□□ -0.27
DDX55-206ENST00000539934 NDUFA5Q16718 116 aa13.39□□□□□ -0.27
DDX55-206ENST00000539934 P3H1Q32P28 736 aa13.39□□□□□ -0.27
DDX55-206ENST00000539934 MLKLQ8NB16 471 aa13.39□□□□□ -0.27
DDX55-206ENST00000539934 STAMQ92783 540 aa13.39□□□□□ -0.27
DDX55-206ENST00000539934 RBM14Q96PK6 669 aaKnown RBP13.39□□□□□ -0.27
DDX55-206ENST00000539934 AMNQ9BXJ7 453 aa13.39□□□□□ -0.27
DDX55-206ENST00000539934 PFDN4Q9NQP4 134 aa13.39□□□□□ -0.27
DDX55-206ENST00000539934 PP2D1A8MPX8 630 aa13.38□□□□□ -0.27
DDX55-206ENST00000539934 SPECC1L-ADORA2AF8WAN1 911 aa13.38□□□□□ -0.27
DDX55-206ENST00000539934 FOSP01100 380 aaPredicted RBP13.38□□□□□ -0.27
DDX55-206ENST00000539934 APOEP02649 317 aa13.38□□□□□ -0.27
DDX55-206ENST00000539934 ALAS1P13196 640 aa13.38□□□□□ -0.27
DDX55-206ENST00000539934 CYP2B6P20813 491 aa13.38□□□□□ -0.27
DDX55-206ENST00000539934 CASP1P29466 404 aa13.38□□□□□ -0.27
DDX55-206ENST00000539934 CLK2P49760 499 aaKnown RBP13.38□□□□□ -0.27
DDX55-206ENST00000539934 SERPINB8P50452 374 aa13.38□□□□□ -0.27
DDX55-206ENST00000539934 HSD17B7P56937 341 aa13.38□□□□□ -0.27
DDX55-206ENST00000539934 DPYDQ12882 1025 aa13.38□□□□□ -0.27
DDX55-206ENST00000539934 PLEKHG6Q3KR16 790 aa13.38□□□□□ -0.27
DDX55-206ENST00000539934 ANKDD1AQ495B1 522 aa13.38□□□□□ -0.27
DDX55-206ENST00000539934 SPATA1Q5VX52 437 aa13.38□□□□□ -0.27
DDX55-206ENST00000539934 SPATA20Q8TB22 786 aa13.38□□□□□ -0.27
DDX55-206ENST00000539934 ACER1Q8TDN7 264 aa13.38□□□□□ -0.27
DDX55-206ENST00000539934 SCG3Q8WXD2 468 aaKnown RBP13.38□□□□□ -0.27
DDX55-206ENST00000539934 AZIN2Q96A70 460 aa13.38□□□□□ -0.27
DDX55-206ENST00000539934 AK8Q96MA6 479 aa13.38□□□□□ -0.27
DDX55-206ENST00000539934 CARD6Q9BX69 1037 aa13.38□□□□□ -0.27
DDX55-206ENST00000539934 FANCFQ9NPI8 374 aa13.38□□□□□ -0.27
DDX55-206ENST00000539934 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP13.38□□□□□ -0.27
DDX55-206ENST00000539934 TMX2Q9Y320 296 aa13.38□□□□□ -0.27
DDX55-206ENST00000539934 PFASO15067 1338 aa13.38□□□□□ -0.27
DDX55-206ENST00000539934 PTPRFP10586 1907 aa13.38□□□□□ -0.27
DDX55-206ENST00000539934 LCA5LO95447 670 aa13.37□□□□□ -0.27
DDX55-206ENST00000539934 TDP2O95551 362 aa13.37□□□□□ -0.27
DDX55-206ENST00000539934 GSTA2P09210 222 aa13.37□□□□□ -0.27
DDX55-206ENST00000539934 BMP8BP34820 402 aa13.37□□□□□ -0.27
DDX55-206ENST00000539934 CAP2P40123 477 aa13.37□□□□□ -0.27
DDX55-206ENST00000539934 SNAP25P60880 206 aa13.37□□□□□ -0.27
DDX55-206ENST00000539934 CCZ1BP86790 482 aa13.37□□□□□ -0.27
DDX55-206ENST00000539934 CCZ1P86791 482 aaPredicted RBP13.37□□□□□ -0.27
DDX55-206ENST00000539934 LMNB2Q03252 620 aa13.37□□□□□ -0.27
DDX55-206ENST00000539934 TOMM20Q15388 145 aa13.37□□□□□ -0.27
DDX55-206ENST00000539934 CALCRLQ16602 461 aa13.37□□□□□ -0.27
DDX55-206ENST00000539934 LRIT3Q3SXY7 679 aa13.37□□□□□ -0.27
DDX55-206ENST00000539934 NDUFAF5Q5TEU4 345 aa13.37□□□□□ -0.27
DDX55-206ENST00000539934 TCERG1LQ5VWI1 586 aa13.37□□□□□ -0.27
DDX55-206ENST00000539934 RRAGBQ5VZM2 374 aa13.37□□□□□ -0.27
DDX55-206ENST00000539934 PDXDC2PQ6P474 469 aa13.37□□□□□ -0.27
DDX55-206ENST00000539934 CYP26C1Q6V0L0 522 aa13.37□□□□□ -0.27
DDX55-206ENST00000539934 FBXO11Q86XK2 927 aa13.37□□□□□ -0.27
DDX55-206ENST00000539934 ARHGEF2Q92974 986 aaKnown RBP13.37□□□□□ -0.27
DDX55-206ENST00000539934 PLVAPQ9BX97 442 aa13.37□□□□□ -0.27
DDX55-206ENST00000539934 CCSER1Q9C0I3 900 aa13.37□□□□□ -0.27
DDX55-206ENST00000539934 NDEL1Q9GZM8 345 aa13.37□□□□□ -0.27
DDX55-206ENST00000539934 FAM192AQ9GZU8 254 aa13.37□□□□□ -0.27
DDX55-206ENST00000539934 SERHL2Q9H4I8 314 aa13.37□□□□□ -0.27
DDX55-206ENST00000539934 C11orf49Q9H6J7 331 aa13.37□□□□□ -0.27
DDX55-206ENST00000539934 SH2D4AQ9H788 454 aa13.37□□□□□ -0.27
DDX55-206ENST00000539934 HMX1Q9NP08 348 aaPredicted RBP13.37□□□□□ -0.27
DDX55-206ENST00000539934 EURLQ9NYK6 297 aa13.37□□□□□ -0.27
DDX55-206ENST00000539934 BAIAP3O94812 1187 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms