RNA–Protein interactions for RNA: ENST00000539843.5

UBE3B-211, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 2

Gene UBE3B, Length 586 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-211ENST00000539843 ZNF461Q8TAF7 563 aa16.71■□□□□ 0.27
UBE3B-211ENST00000539843 CXCL16Q9H2A7 254 aa16.71■□□□□ 0.27
UBE3B-211ENST00000539843 ODF2LQ9ULJ1 636 aa16.71■□□□□ 0.27
UBE3B-211ENST00000539843 I3L4J1 428 aa16.7■□□□□ 0.26
UBE3B-211ENST00000539843 ADAM12O43184 909 aa16.7■□□□□ 0.26
UBE3B-211ENST00000539843 LIG4P49917 911 aa16.7■□□□□ 0.26
UBE3B-211ENST00000539843 ARPP19P56211 112 aa16.7■□□□□ 0.26
UBE3B-211ENST00000539843 ROR1Q01973 937 aa16.7■□□□□ 0.26
UBE3B-211ENST00000539843 PPP2R3AQ06190 1150 aa16.7■□□□□ 0.26
UBE3B-211ENST00000539843 MAPK7Q13164 816 aa16.7■□□□□ 0.26
UBE3B-211ENST00000539843 IL17AQ16552 155 aa16.7■□□□□ 0.26
UBE3B-211ENST00000539843 CTXN3Q4LDR2 81 aa16.7■□□□□ 0.26
UBE3B-211ENST00000539843 IQCEQ6IPM2 695 aa16.7■□□□□ 0.26
UBE3B-211ENST00000539843 SLC8B1Q6J4K2 584 aa16.7■□□□□ 0.26
UBE3B-211ENST00000539843 ZC3H14Q6PJT7 736 aaKnown RBP16.7■□□□□ 0.26
UBE3B-211ENST00000539843 TMEM161BQ8NDZ6 487 aa16.7■□□□□ 0.26
UBE3B-211ENST00000539843 PLIN2Q99541 437 aa16.7■□□□□ 0.26
UBE3B-211ENST00000539843 MMTAG2Q9BU76 263 aaKnown RBP16.7■□□□□ 0.26
UBE3B-211ENST00000539843 PLEKHA5Q9HAU0 1116 aa16.7■□□□□ 0.26
UBE3B-211ENST00000539843 CYP4F11Q9HBI6 524 aa16.7■□□□□ 0.26
UBE3B-211ENST00000539843 SIT1Q9Y3P8 196 aa16.7■□□□□ 0.26
UBE3B-211ENST00000539843 MTCL1Q9Y4B5 1905 aaKnown RBP16.7■□□□□ 0.26
UBE3B-211ENST00000539843 TRIOO75962 3097 aa16.69■□□□□ 0.26
UBE3B-211ENST00000539843 KRBA1A5PL33 1030 aa16.69■□□□□ 0.26
UBE3B-211ENST00000539843 ZNF197O14709 1029 aa16.69■□□□□ 0.26
UBE3B-211ENST00000539843 PI15O43692 258 aa16.69■□□□□ 0.26
UBE3B-211ENST00000539843 TBCAO75347 108 aaKnown RBP16.69■□□□□ 0.26
UBE3B-211ENST00000539843 FAM13AO94988 1023 aa16.69■□□□□ 0.26
UBE3B-211ENST00000539843 CLTAP09496 248 aa16.69■□□□□ 0.26
UBE3B-211ENST00000539843 MAPTP10636 758 aaKnown RBP16.69■□□□□ 0.26
UBE3B-211ENST00000539843 PTPN2P17706 415 aa16.69■□□□□ 0.26
UBE3B-211ENST00000539843 SLC12A3P55017 1021 aa16.69■□□□□ 0.26
UBE3B-211ENST00000539843 NTHL1P78549 312 aa16.69■□□□□ 0.26
UBE3B-211ENST00000539843 LARP1BQ659C4 914 aaKnown RBP16.69■□□□□ 0.26
UBE3B-211ENST00000539843 TPGS2Q68CL5 300 aa16.69■□□□□ 0.26
UBE3B-211ENST00000539843 PARM1Q6UWI2 310 aa16.69■□□□□ 0.26
UBE3B-211ENST00000539843 TAS1R3Q7RTX0 852 aa16.69■□□□□ 0.26
UBE3B-211ENST00000539843 KCNK18Q7Z418 384 aa16.69■□□□□ 0.26
UBE3B-211ENST00000539843 BRAPQ7Z569 592 aa16.69■□□□□ 0.26
UBE3B-211ENST00000539843 C3orf58Q8NDZ4 430 aa16.69■□□□□ 0.26
UBE3B-211ENST00000539843 OXCT2Q9BYC2 517 aaPredicted RBP16.69■□□□□ 0.26
UBE3B-211ENST00000539843 GDE1Q9NZC3 331 aa16.69■□□□□ 0.26
UBE3B-211ENST00000539843 MAFFQ9ULX9 164 aa16.69■□□□□ 0.26
UBE3B-211ENST00000539843 PRR23AA6NEV1 266 aa16.68■□□□□ 0.26
UBE3B-211ENST00000539843 K7ENM7 598 aa16.68■□□□□ 0.26
UBE3B-211ENST00000539843 HNRNPDLO14979 420 aaKnown RBP16.68■□□□□ 0.26
UBE3B-211ENST00000539843 RHOP08100 348 aa16.68■□□□□ 0.26
UBE3B-211ENST00000539843 CPB1P15086 417 aa16.68■□□□□ 0.26
UBE3B-211ENST00000539843 PRKCQQ04759 706 aa16.68■□□□□ 0.26
UBE3B-211ENST00000539843 SOX4Q06945 474 aaPredicted RBP16.68■□□□□ 0.26
UBE3B-211ENST00000539843 MCL1Q07820 350 aa16.68■□□□□ 0.26
UBE3B-211ENST00000539843 TMEM119Q4V9L6 283 aa16.68■□□□□ 0.26
UBE3B-211ENST00000539843 SPECC1Q5M775 1068 aa16.68■□□□□ 0.26
UBE3B-211ENST00000539843 CYP4A22Q5TCH4 519 aa16.68■□□□□ 0.26
UBE3B-211ENST00000539843 PDZD4Q76G19 769 aaPredicted RBP16.68■□□□□ 0.26
UBE3B-211ENST00000539843 FRMD5Q7Z6J6 570 aa16.68■□□□□ 0.26
UBE3B-211ENST00000539843 USP37Q86T82 979 aa16.68■□□□□ 0.26
UBE3B-211ENST00000539843 GPBP1Q86WP2 473 aa16.68■□□□□ 0.26
UBE3B-211ENST00000539843 ITFG1Q8TB96 612 aa16.68■□□□□ 0.26
UBE3B-211ENST00000539843 KCNG4Q8TDN1 519 aa16.68■□□□□ 0.26
UBE3B-211ENST00000539843 FGF14Q92915 247 aa16.68■□□□□ 0.26
UBE3B-211ENST00000539843 SUSD3Q96L08 255 aa16.68■□□□□ 0.26
UBE3B-211ENST00000539843 ZMAT2Q96NC0 199 aaKnown RBP16.68■□□□□ 0.26
UBE3B-211ENST00000539843 PNMA5Q96PV4 448 aa16.68■□□□□ 0.26
UBE3B-211ENST00000539843 TSPAN18Q96SJ8 248 aa16.68■□□□□ 0.26
UBE3B-211ENST00000539843 SEMA4AQ9H3S1 761 aa16.68■□□□□ 0.26
UBE3B-211ENST00000539843 PARVGQ9HBI0 331 aa16.68■□□□□ 0.26
UBE3B-211ENST00000539843 DNMT3BQ9UBC3 853 aaKnown RBP16.68■□□□□ 0.26
UBE3B-211ENST00000539843 UBQLN1Q9UMX0 589 aaKnown RBP16.68■□□□□ 0.26
UBE3B-211ENST00000539843 ARHGEF37A1IGU5 675 aa16.67■□□□□ 0.26
UBE3B-211ENST00000539843 ATF2P15336 505 aa16.67■□□□□ 0.26
UBE3B-211ENST00000539843 PDCP20941 246 aa16.67■□□□□ 0.26
UBE3B-211ENST00000539843 LONP1P36776 959 aaKnown RBP16.67■□□□□ 0.26
UBE3B-211ENST00000539843 NCKAP1LP55160 1127 aa16.67■□□□□ 0.26
UBE3B-211ENST00000539843 HAUS6Q7Z4H7 955 aa16.67■□□□□ 0.26
UBE3B-211ENST00000539843 NPAS3Q8IXF0 933 aa16.67■□□□□ 0.26
UBE3B-211ENST00000539843 TCEAL8Q8IYN2 117 aa16.67■□□□□ 0.26
UBE3B-211ENST00000539843 MYCT1Q8N699 235 aa16.67■□□□□ 0.26
UBE3B-211ENST00000539843 LEMD2Q8NC56 503 aa16.67■□□□□ 0.26
UBE3B-211ENST00000539843 ING5Q8WYH8 240 aa16.67■□□□□ 0.26
UBE3B-211ENST00000539843 KIF12Q96FN5 646 aa16.67■□□□□ 0.26
UBE3B-211ENST00000539843 BCO2Q9BYV7 579 aa16.67■□□□□ 0.26
UBE3B-211ENST00000539843 ZHX3Q9H4I2 956 aa16.67■□□□□ 0.26
UBE3B-211ENST00000539843 RPF1Q9H9Y2 349 aaKnown RBP16.67■□□□□ 0.26
UBE3B-211ENST00000539843 AVENQ9NQS1 362 aaPredicted RBP16.67■□□□□ 0.26
UBE3B-211ENST00000539843 HCFC1R1Q9NWW0 138 aa16.67■□□□□ 0.26
UBE3B-211ENST00000539843 FBXL5Q9UKA1 691 aa16.67■□□□□ 0.26
UBE3B-211ENST00000539843 PCDHB8Q9UN66 801 aa16.67■□□□□ 0.26
UBE3B-211ENST00000539843 WDR27A2RRH5 827 aa16.66■□□□□ 0.26
UBE3B-211ENST00000539843 ABLIM1O14639 778 aa16.66■□□□□ 0.26
UBE3B-211ENST00000539843 NCAM2O15394 837 aa16.66■□□□□ 0.26
UBE3B-211ENST00000539843 ECI2O75521 394 aa16.66■□□□□ 0.26
UBE3B-211ENST00000539843 ABLIM3O94929 683 aa16.66■□□□□ 0.26
UBE3B-211ENST00000539843 CXCL8P10145 99 aa16.66■□□□□ 0.26
UBE3B-211ENST00000539843 CYP3A5P20815 502 aa16.66■□□□□ 0.26
UBE3B-211ENST00000539843 PAX3P23760 479 aa16.66■□□□□ 0.26
UBE3B-211ENST00000539843 MAGEA9P43362 315 aa16.66■□□□□ 0.26
UBE3B-211ENST00000539843 GPC5P78333 572 aa16.66■□□□□ 0.26
UBE3B-211ENST00000539843 CACNB1Q02641 598 aaPredicted RBP16.66■□□□□ 0.26
UBE3B-211ENST00000539843 YWHAHQ04917 246 aaPredicted RBP16.66■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms