RNA–Protein interactions for RNA: ENST00000539737.6

USB1-203, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 2 BASIC

Gene USB1, Length 1,212 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-203ENST00000539737 DTHD1Q6ZMT9 781 aa16.41■□□□□ 0.22
USB1-203ENST00000539737 GPIHBP1Q8IV16 184 aa16.41■□□□□ 0.22
USB1-203ENST00000539737 DDX27Q96GQ7 796 aaKnown RBP16.41■□□□□ 0.22
USB1-203ENST00000539737 SHDQ96IW2 340 aa16.41■□□□□ 0.22
USB1-203ENST00000539737 FZD8Q9H461 694 aa16.41■□□□□ 0.22
USB1-203ENST00000539737 TUFT1Q9NNX1 390 aa16.41■□□□□ 0.22
USB1-203ENST00000539737 USP18Q9UMW8 372 aa16.41■□□□□ 0.22
USB1-203ENST00000539737 COL4A2P08572 1712 aa16.4■□□□□ 0.22
USB1-203ENST00000539737 XRCC6P12956 609 aaKnown RBP eCLIP16.4■□□□□ 0.22
USB1-203ENST00000539737 FGFR3P22607 806 aa16.4■□□□□ 0.22
USB1-203ENST00000539737 TGM1P22735 817 aa16.4■□□□□ 0.22
USB1-203ENST00000539737 OSTNP61366 133 aa16.4■□□□□ 0.22
USB1-203ENST00000539737 CREMQ03060 361 aa16.4■□□□□ 0.22
USB1-203ENST00000539737 POU5F1BQ06416 359 aa16.4■□□□□ 0.22
USB1-203ENST00000539737 DMWDQ09019 674 aa16.4■□□□□ 0.22
USB1-203ENST00000539737 SRSF5Q13243 272 aaKnown RBP16.4■□□□□ 0.22
USB1-203ENST00000539737 PRPF4BQ13523 1007 aaKnown RBP16.4■□□□□ 0.22
USB1-203ENST00000539737 RAB33AQ14088 237 aa16.4■□□□□ 0.22
USB1-203ENST00000539737 PDIA5Q14554 519 aa16.4■□□□□ 0.22
USB1-203ENST00000539737 ARL6IP4Q66PJ3 421 aaKnown RBP16.4■□□□□ 0.22
USB1-203ENST00000539737 CDCA2Q69YH5 1023 aaPredicted RBP16.4■□□□□ 0.22
USB1-203ENST00000539737 PPP4R3CPQ6ZMV5 832 aa16.4■□□□□ 0.22
USB1-203ENST00000539737 MTSS1LQ765P7 747 aa16.4■□□□□ 0.22
USB1-203ENST00000539737 HS6ST3Q8IZP7 471 aa16.4■□□□□ 0.22
USB1-203ENST00000539737 ATRIPQ8WXE1 791 aa16.4■□□□□ 0.22
USB1-203ENST00000539737 ZSWIM3Q96MP5 696 aa16.4■□□□□ 0.22
USB1-203ENST00000539737 POLR3CQ9BUI4 534 aaPredicted RBP16.4■□□□□ 0.22
USB1-203ENST00000539737 NFKBIZQ9BYH8 718 aa16.4■□□□□ 0.22
USB1-203ENST00000539737 CCDC113Q9H0I3 377 aa16.4■□□□□ 0.22
USB1-203ENST00000539737 MTRRQ9UBK8 725 aa16.4■□□□□ 0.22
USB1-203ENST00000539737 LRWD1Q9UFC0 647 aa16.4■□□□□ 0.22
USB1-203ENST00000539737 XYLBO75191 536 aa16.39■□□□□ 0.21
USB1-203ENST00000539737 B3GAT3O94766 335 aa16.39■□□□□ 0.21
USB1-203ENST00000539737 SEC24AO95486 1093 aa16.39■□□□□ 0.21
USB1-203ENST00000539737 MUTP22033 750 aa16.39■□□□□ 0.21
USB1-203ENST00000539737 PRKCQQ04759 706 aa16.39■□□□□ 0.21
USB1-203ENST00000539737 ZBTB41Q5SVQ8 909 aa16.39■□□□□ 0.21
USB1-203ENST00000539737 NT5DC1Q5TFE4 455 aa16.39■□□□□ 0.21
USB1-203ENST00000539737 CATSPER3Q86XQ3 398 aa16.39■□□□□ 0.21
USB1-203ENST00000539737 IGSF22Q8N9C0 903 aa16.39■□□□□ 0.21
USB1-203ENST00000539737 ZBTB44Q8NCP5 570 aa16.39■□□□□ 0.21
USB1-203ENST00000539737 NACC1Q96RE7 527 aa16.39■□□□□ 0.21
USB1-203ENST00000539737 CORO1BQ9BR76 489 aa16.39■□□□□ 0.21
USB1-203ENST00000539737 PRMT7Q9NVM4 692 aaPredicted RBP16.39■□□□□ 0.21
USB1-203ENST00000539737 FBXO4Q9UKT5 387 aa16.39■□□□□ 0.21
USB1-203ENST00000539737 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.39■□□□□ 0.21
USB1-203ENST00000539737 ZFP37Q9Y6Q3 630 aaPredicted RBP16.39■□□□□ 0.21
USB1-203ENST00000539737 SDK1Q7Z5N4 2213 aa16.38■□□□□ 0.21
USB1-203ENST00000539737 WDR27A2RRH5 827 aa16.38■□□□□ 0.21
USB1-203ENST00000539737 N4BP3O15049 544 aa16.38■□□□□ 0.21
USB1-203ENST00000539737 MEFVO15553 781 aaPredicted RBP16.38■□□□□ 0.21
USB1-203ENST00000539737 LILRB5O75023 590 aa16.38■□□□□ 0.21
USB1-203ENST00000539737 RPA1P27694 616 aa16.38■□□□□ 0.21
USB1-203ENST00000539737 CDR1P51861 262 aa16.38■□□□□ 0.21
USB1-203ENST00000539737 ROR1Q01973 937 aa16.38■□□□□ 0.21
USB1-203ENST00000539737 SPEM2Q0P670 501 aa16.38■□□□□ 0.21
USB1-203ENST00000539737 FAM78AQ5JUQ0 283 aa16.38■□□□□ 0.21
USB1-203ENST00000539737 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.38■□□□□ 0.21
USB1-203ENST00000539737 GPR65Q8IYL9 337 aa16.38■□□□□ 0.21
USB1-203ENST00000539737 ZNF687Q8N1G0 1237 aa16.38■□□□□ 0.21
USB1-203ENST00000539737 SPRYD3Q8NCJ5 442 aa16.38■□□□□ 0.21
USB1-203ENST00000539737 MCPH1Q8NEM0 835 aa16.38■□□□□ 0.21
USB1-203ENST00000539737 C2orf42Q9NWW7 574 aa16.38■□□□□ 0.21
USB1-203ENST00000539737 ZSCAN32Q9NX65 697 aa16.38■□□□□ 0.21
USB1-203ENST00000539737 USP24Q9UPU5 2620 aa16.38■□□□□ 0.21
USB1-203ENST00000539737 CFAP47Q6ZTR5 3102 aa16.38■□□□□ 0.21
USB1-203ENST00000539737 SPTLC1O15269 473 aa16.37■□□□□ 0.21
USB1-203ENST00000539737 C1RP00736 705 aa16.37■□□□□ 0.21
USB1-203ENST00000539737 ZSCAN22P10073 491 aaPredicted RBP16.37■□□□□ 0.21
USB1-203ENST00000539737 TDGF1P13385 188 aa16.37■□□□□ 0.21
USB1-203ENST00000539737 HOXA9P31269 272 aa16.37■□□□□ 0.21
USB1-203ENST00000539737 VIPR2P41587 438 aa16.37■□□□□ 0.21
USB1-203ENST00000539737 SF3A1Q15459 793 aaKnown RBP16.37■□□□□ 0.21
USB1-203ENST00000539737 ECM1Q16610 540 aa16.37■□□□□ 0.21
USB1-203ENST00000539737 ZNF528Q3MIS6 628 aa16.37■□□□□ 0.21
USB1-203ENST00000539737 PRSS36Q5K4E3 855 aa16.37■□□□□ 0.21
USB1-203ENST00000539737 KRT79Q5XKE5 535 aa16.37■□□□□ 0.21
USB1-203ENST00000539737 PADI6Q6TGC4 694 aa16.37■□□□□ 0.21
USB1-203ENST00000539737 ZBTB8OSQ8IWT0 167 aa16.37■□□□□ 0.21
USB1-203ENST00000539737 SNX29Q8TEQ0 813 aa16.37■□□□□ 0.21
USB1-203ENST00000539737 CLDN23Q96B33 292 aa16.37■□□□□ 0.21
USB1-203ENST00000539737 PPP1R10Q96QC0 940 aaKnown RBP16.37■□□□□ 0.21
USB1-203ENST00000539737 EPC1Q9H2F5 836 aa16.37■□□□□ 0.21
USB1-203ENST00000539737 PRMT8Q9NR22 394 aaPredicted RBP16.37■□□□□ 0.21
USB1-203ENST00000539737 RALYQ9UKM9 306 aaKnown RBP16.37■□□□□ 0.21
USB1-203ENST00000539737 PCDHGA2Q9Y5H1 932 aa16.37■□□□□ 0.21
USB1-203ENST00000539737 ARHGEF35A5YM69 484 aa16.36■□□□□ 0.21
USB1-203ENST00000539737 VWA3AA6NCI4 1184 aa16.36■□□□□ 0.21
USB1-203ENST00000539737 MOSPD3O75425 235 aa16.36■□□□□ 0.21
USB1-203ENST00000539737 ECI2O75521 394 aa16.36■□□□□ 0.21
USB1-203ENST00000539737 KCNA4P22459 653 aa16.36■□□□□ 0.21
USB1-203ENST00000539737 CCT6AP40227 531 aaKnown RBP16.36■□□□□ 0.21
USB1-203ENST00000539737 SOX9P48436 509 aa16.36■□□□□ 0.21
USB1-203ENST00000539737 SATB1Q01826 763 aa16.36■□□□□ 0.21
USB1-203ENST00000539737 GAS6Q14393 721 aa16.36■□□□□ 0.21
USB1-203ENST00000539737 MAPK6Q16659 721 aa16.36■□□□□ 0.21
USB1-203ENST00000539737 UPP1Q16831 310 aa16.36■□□□□ 0.21
USB1-203ENST00000539737 FAM187BQ17R55 369 aa16.36■□□□□ 0.21
USB1-203ENST00000539737 WDR44Q5JSH3 913 aa16.36■□□□□ 0.21
USB1-203ENST00000539737 TTC8Q8TAM2 541 aa16.36■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms