RNA–Protein interactions for RNA: ENST00000539177.1

CCDC144NL-202, Transcript of coiled-coil domain containing 144 family, N-terminal like, humanhuman

TSL 3

Gene CCDC144NL, Length 443 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NL-202ENST00000539177 C3orf58Q8NDZ4 430 aa16.13■□□□□ 0.17
CCDC144NL-202ENST00000539177 BSNDQ8WZ55 320 aa16.13■□□□□ 0.17
CCDC144NL-202ENST00000539177 ZNF274Q96GC6 653 aaPredicted RBP16.13■□□□□ 0.17
CCDC144NL-202ENST00000539177 ZNF334Q9HCZ1 680 aaPredicted RBP16.13■□□□□ 0.17
CCDC144NL-202ENST00000539177 PCDHA12Q9UN75 941 aa16.13■□□□□ 0.17
CCDC144NL-202ENST00000539177 BACE2Q9Y5Z0 518 aa16.13■□□□□ 0.17
CCDC144NL-202ENST00000539177 ARHGEF37A1IGU5 675 aa16.12■□□□□ 0.17
CCDC144NL-202ENST00000539177 GJA1P17302 382 aa16.12■□□□□ 0.17
CCDC144NL-202ENST00000539177 XBP1P17861 261 aa16.12■□□□□ 0.17
CCDC144NL-202ENST00000539177 ATP2B1P20020 1258 aa16.12■□□□□ 0.17
CCDC144NL-202ENST00000539177 VIPR2P41587 438 aa16.12■□□□□ 0.17
CCDC144NL-202ENST00000539177 TXKP42681 527 aa16.12■□□□□ 0.17
CCDC144NL-202ENST00000539177 CXCL12P48061 93 aa16.12■□□□□ 0.17
CCDC144NL-202ENST00000539177 NR5A1Q13285 461 aa16.12■□□□□ 0.17
CCDC144NL-202ENST00000539177 CALCRLQ16602 461 aa16.12■□□□□ 0.17
CCDC144NL-202ENST00000539177 MAPK6Q16659 721 aa16.12■□□□□ 0.17
CCDC144NL-202ENST00000539177 FAM187BQ17R55 369 aa16.12■□□□□ 0.17
CCDC144NL-202ENST00000539177 HEATR6Q6AI08 1181 aaKnown RBP16.12■□□□□ 0.17
CCDC144NL-202ENST00000539177 PDZD4Q76G19 769 aaPredicted RBP16.12■□□□□ 0.17
CCDC144NL-202ENST00000539177 HS6ST3Q8IZP7 471 aa16.12■□□□□ 0.17
CCDC144NL-202ENST00000539177 IRF7Q92985 503 aa16.12■□□□□ 0.17
CCDC144NL-202ENST00000539177 ZSWIM3Q96MP5 696 aa16.12■□□□□ 0.17
CCDC144NL-202ENST00000539177 ASB16Q96NS5 453 aa16.12■□□□□ 0.17
CCDC144NL-202ENST00000539177 TTC12Q9H892 705 aaPredicted RBP16.12■□□□□ 0.17
CCDC144NL-202ENST00000539177 CYP4F11Q9HBI6 524 aa16.12■□□□□ 0.17
CCDC144NL-202ENST00000539177 AVENQ9NQS1 362 aaPredicted RBP16.12■□□□□ 0.17
CCDC144NL-202ENST00000539177 NCANO14594 1321 aa16.12■□□□□ 0.17
CCDC144NL-202ENST00000539177 NUP210Q8TEM1 1887 aaPredicted RBP16.12■□□□□ 0.17
CCDC144NL-202ENST00000539177 EML5Q05BV3 1969 aa16.11■□□□□ 0.17
CCDC144NL-202ENST00000539177 HRO43593 1189 aa16.11■□□□□ 0.17
CCDC144NL-202ENST00000539177 SEC24AO95486 1093 aa16.11■□□□□ 0.17
CCDC144NL-202ENST00000539177 CCNE1P24864 410 aa16.11■□□□□ 0.17
CCDC144NL-202ENST00000539177 SCRN1Q12765 414 aa16.11■□□□□ 0.17
CCDC144NL-202ENST00000539177 GAS6Q14393 721 aa16.11■□□□□ 0.17
CCDC144NL-202ENST00000539177 CSRP2Q16527 193 aa16.11■□□□□ 0.17
CCDC144NL-202ENST00000539177 RTL10Q7L3V2 364 aa16.11■□□□□ 0.17
CCDC144NL-202ENST00000539177 MAP4K3Q8IVH8 894 aa16.11■□□□□ 0.17
CCDC144NL-202ENST00000539177 ZNF461Q8TAF7 563 aa16.11■□□□□ 0.17
CCDC144NL-202ENST00000539177 PPP1R10Q96QC0 940 aaKnown RBP16.11■□□□□ 0.17
CCDC144NL-202ENST00000539177 IER2Q9BTL4 223 aa16.11■□□□□ 0.17
CCDC144NL-202ENST00000539177 KIFC3Q9BVG8 833 aa16.11■□□□□ 0.17
CCDC144NL-202ENST00000539177 C2orf40Q9H1Z8 148 aa16.11■□□□□ 0.17
CCDC144NL-202ENST00000539177 ZSWIM6Q9HCJ5 1215 aa16.11■□□□□ 0.17
CCDC144NL-202ENST00000539177 RBM12Q9NTZ6 932 aaKnown RBP16.11■□□□□ 0.17
CCDC144NL-202ENST00000539177 INSL5Q9Y5Q6 135 aa16.11■□□□□ 0.17
CCDC144NL-202ENST00000539177 CYP46A1Q9Y6A2 500 aa16.11■□□□□ 0.17
CCDC144NL-202ENST00000539177 SDK1Q7Z5N4 2213 aa16.1■□□□□ 0.17
CCDC144NL-202ENST00000539177 WNT7AO00755 349 aa16.1■□□□□ 0.17
CCDC144NL-202ENST00000539177 ZNF197O14709 1029 aa16.1■□□□□ 0.17
CCDC144NL-202ENST00000539177 TRAPPC3O43617 180 aa16.1■□□□□ 0.17
CCDC144NL-202ENST00000539177 LRP3O75074 770 aa16.1■□□□□ 0.17
CCDC144NL-202ENST00000539177 CHRNB1P11230 501 aa16.1■□□□□ 0.17
CCDC144NL-202ENST00000539177 PSMC3P17980 439 aa16.1■□□□□ 0.17
CCDC144NL-202ENST00000539177 HOXC13P31276 330 aa16.1■□□□□ 0.17
CCDC144NL-202ENST00000539177 RBM25P49756 843 aaKnown RBP16.1■□□□□ 0.17
CCDC144NL-202ENST00000539177 SOX4Q06945 474 aaPredicted RBP16.1■□□□□ 0.17
CCDC144NL-202ENST00000539177 UPP1Q16831 310 aa16.1■□□□□ 0.17
CCDC144NL-202ENST00000539177 SLC8B1Q6J4K2 584 aa16.1■□□□□ 0.17
CCDC144NL-202ENST00000539177 MCPH1Q8NEM0 835 aa16.1■□□□□ 0.17
CCDC144NL-202ENST00000539177 DEPTORQ8TB45 409 aa16.1■□□□□ 0.17
CCDC144NL-202ENST00000539177 CCDC113Q9H0I3 377 aa16.1■□□□□ 0.17
CCDC144NL-202ENST00000539177 CACNA1GO43497 2377 aa16.1■□□□□ 0.17
CCDC144NL-202ENST00000539177 CFAP47Q6ZTR5 3102 aa16.1■□□□□ 0.17
CCDC144NL-202ENST00000539177 ATG2BQ96BY7 2078 aa16.1■□□□□ 0.17
CCDC144NL-202ENST00000539177 ACKR2O00590 384 aa16.09■□□□□ 0.17
CCDC144NL-202ENST00000539177 ZNF263O14978 683 aa16.09■□□□□ 0.17
CCDC144NL-202ENST00000539177 CDKL5O76039 1030 aa16.09■□□□□ 0.17
CCDC144NL-202ENST00000539177 ABLIM3O94929 683 aa16.09■□□□□ 0.17
CCDC144NL-202ENST00000539177 MYL4P12829 197 aa16.09■□□□□ 0.17
CCDC144NL-202ENST00000539177 KRT2P35908 639 aa16.09■□□□□ 0.17
CCDC144NL-202ENST00000539177 SOX9P48436 509 aa16.09■□□□□ 0.17
CCDC144NL-202ENST00000539177 DCAF4L1Q3SXM0 396 aa16.09■□□□□ 0.17
CCDC144NL-202ENST00000539177 CYP4A22Q5TCH4 519 aa16.09■□□□□ 0.17
CCDC144NL-202ENST00000539177 Q6ZS52 159 aa16.09■□□□□ 0.17
CCDC144NL-202ENST00000539177 ZSCAN18Q8TBC5 510 aaPredicted RBP16.09■□□□□ 0.17
CCDC144NL-202ENST00000539177 SMARCD2Q92925 531 aa16.09■□□□□ 0.17
CCDC144NL-202ENST00000539177 UROC1Q96N76 676 aa16.09■□□□□ 0.17
CCDC144NL-202ENST00000539177 POLD4Q9HCU8 107 aa16.09■□□□□ 0.17
CCDC144NL-202ENST00000539177 ANGPTL2Q9UKU9 493 aa16.09■□□□□ 0.17
CCDC144NL-202ENST00000539177 CNOT1A5YKK6 2376 aaKnown RBP16.09■□□□□ 0.17
CCDC144NL-202ENST00000539177 STK36Q9NRP7 1315 aa16.09■□□□□ 0.17
CCDC144NL-202ENST00000539177 ANK1P16157 1881 aa16.08■□□□□ 0.17
CCDC144NL-202ENST00000539177 SLC38A8A6NNN8 435 aa16.08■□□□□ 0.16
CCDC144NL-202ENST00000539177 NEMFO60524 1076 aa16.08■□□□□ 0.16
CCDC144NL-202ENST00000539177 MOSPD3O75425 235 aa16.08■□□□□ 0.16
CCDC144NL-202ENST00000539177 SPATA31C1P0DKV0 1188 aa16.08■□□□□ 0.16
CCDC144NL-202ENST00000539177 ATF2P15336 505 aa16.08■□□□□ 0.16
CCDC144NL-202ENST00000539177 FOSBP53539 338 aa16.08■□□□□ 0.16
CCDC144NL-202ENST00000539177 OSTNP61366 133 aa16.08■□□□□ 0.16
CCDC144NL-202ENST00000539177 TWF1Q12792 350 aa16.08■□□□□ 0.16
CCDC144NL-202ENST00000539177 PTGDRQ13258 359 aa16.08■□□□□ 0.16
CCDC144NL-202ENST00000539177 CCDC6Q16204 474 aa16.08■□□□□ 0.16
CCDC144NL-202ENST00000539177 AASDHQ4L235 1098 aaPredicted RBP16.08■□□□□ 0.16
CCDC144NL-202ENST00000539177 IL31Q6EBC2 164 aa16.08■□□□□ 0.16
CCDC144NL-202ENST00000539177 MAMSTRQ6ZN01 415 aa16.08■□□□□ 0.16
CCDC144NL-202ENST00000539177 CEP68Q76N32 757 aa16.08■□□□□ 0.16
CCDC144NL-202ENST00000539177 GPIHBP1Q8IV16 184 aa16.08■□□□□ 0.16
CCDC144NL-202ENST00000539177 ELMOD1Q8N336 334 aa16.08■□□□□ 0.16
CCDC144NL-202ENST00000539177 SPEM1Q8N4L4 309 aa16.08■□□□□ 0.16
CCDC144NL-202ENST00000539177 FAM160A2Q8N612 972 aaPredicted RBP16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms