RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 DDX23Q9BUQ8 820 aaKnown RBP1.3□□□□□ -2.2
HIF1A-204ENST00000539097 SEMA6BQ9H3T3 888 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 RBM12Q9NTZ6 932 aaKnown RBP1.3□□□□□ -2.2
HIF1A-204ENST00000539097 KLHL14Q9P2G3 628 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 CPNE7Q9UBL6 633 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 DKK2Q9UBU2 259 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 ADAM21Q9UKJ8 722 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 HDAC9Q9UKV0 1011 aa1.3□□□□□ -2.2
HIF1A-204ENST00000539097 ZMYM3Q14202 1370 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 ZNF503-AS2A6NEH8 195 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 FAM157AC9JC47 383 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 C1QTNF3-AMACRE9PGA6 284 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 MYO1FO00160 1098 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 PROM1O43490 865 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 MGEA5O60502 916 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 STC2O76061 302 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 UBXN7O94888 489 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 AHSGP02765 367 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 TSHRP16473 764 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 PEX2P28328 305 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 MLLT6P55198 1093 aaPredicted RBP1.29□□□□□ -2.2
HIF1A-204ENST00000539097 IFIT5Q13325 482 aaKnown RBP1.29□□□□□ -2.2
HIF1A-204ENST00000539097 MRPL49Q13405 166 aaKnown RBP1.29□□□□□ -2.2
HIF1A-204ENST00000539097 IKZF1Q13422 519 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 SPIDRQ14159 915 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 SIM2Q14190 667 aaPredicted RBP1.29□□□□□ -2.2
HIF1A-204ENST00000539097 PAN2Q504Q3 1202 aaKnown RBP1.29□□□□□ -2.2
HIF1A-204ENST00000539097 FAM47AQ5JRC9 791 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 GPATCH4Q5T3I0 446 aaKnown RBP1.29□□□□□ -2.2
HIF1A-204ENST00000539097 PRAMEF9Q5VWM5 478 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 ERICH6BQ5W0A0 696 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 NCAPH2Q6IBW4 605 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 DLK2Q6UY11 383 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 DSTYKQ6XUX3 929 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 ARHGAP27Q6ZUM4 889 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 SESTD1Q86VW0 696 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 GLB1L2Q8IW92 636 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 ABI1Q8IZP0 508 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 ANKRD35Q8N283 1001 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 PIK3C3Q8NEB9 887 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 SLC35B2Q8TB61 432 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 HDAC10Q969S8 669 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 CDK5RAP3Q96JB5 506 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 SGCZQ96LD1 299 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 CGRRF1Q99675 332 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 BRIP1Q9BX63 1249 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 KIAA1683Q9H0B3 1180 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 ZBTB26Q9HCK0 441 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 RTEL1Q9NZ71 1219 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 MYO1AQ9UBC5 1043 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 ADAM29Q9UKF5 820 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 USP18Q9UMW8 372 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 SLC45A2Q9UMX9 530 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 DMTF1Q9Y222 760 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 CTDP1Q9Y5B0 961 aaPredicted RBP1.29□□□□□ -2.2
HIF1A-204ENST00000539097 TAF6LQ9Y6J9 622 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 CARMIL2Q6F5E8 1435 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 A0A1B0GTL3 188 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 SYNDIG1LA6NDD5 238 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 MYADML2A6NDP7 307 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 SLC38A8A6NNN8 435 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 TBX3O15119 743 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 PROP1O75360 226 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 FAM155BO75949 473 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 KRT1P04264 644 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 MMP8P22894 467 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 RPL13P26373 211 aaKnown RBP1.29□□□□□ -2.2
HIF1A-204ENST00000539097 FLT3LGP49771 235 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 CD83Q01151 205 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 RAPGEF1Q13905 1077 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 SAFBQ15424 915 aaKnown RBP eCLIP1.29□□□□□ -2.2
HIF1A-204ENST00000539097 ADGRF1Q5T601 910 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 BTBD8Q5XKL5 378 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 CLEC4GQ6UXB4 293 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 LARP4Q71RC2 724 aaKnown RBP eCLIP1.29□□□□□ -2.2
HIF1A-204ENST00000539097 ZNF551Q7Z340 670 aaPredicted RBP1.29□□□□□ -2.2
HIF1A-204ENST00000539097 CLEC14AQ86T13 490 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 STPG3Q8N7X2 389 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 KYQ8NBH2 561 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 DDX55Q8NHQ9 600 aaKnown RBP eCLIP1.29□□□□□ -2.27e-9■■■■□ 21.3
HIF1A-204ENST00000539097 POF1BQ8WVV4 589 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 NRG4Q8WWG1 115 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 EDAQ92838 391 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 MVB12AQ96EY5 273 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 DDX11Q96FC9 970 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 CEP95Q96GE4 821 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 LOXL4Q96JB6 756 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 PPM1MQ96MI6 270 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 DCLRE1CQ96SD1 692 aaKnown RBP1.29□□□□□ -2.2
HIF1A-204ENST00000539097 MYD88Q99836 296 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 EIF2AK1Q9BQI3 630 aaKnown RBP1.29□□□□□ -2.2
HIF1A-204ENST00000539097 GORASP1Q9BQQ3 440 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 C1orf43Q9BWL3 253 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 SLC46A2Q9BY10 475 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 OR10A5Q9H207 317 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 PCIF1Q9H4Z3 704 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 JMJD4Q9H9V9 463 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 IFT122Q9HBG6 1241 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 LUZP4Q9P127 313 aa1.29□□□□□ -2.2
HIF1A-204ENST00000539097 UBA2Q9UBT2 640 aaPredicted RBP1.29□□□□□ -2.2
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms