RNA–Protein interactions for RNA: ENST00000538838.5

TMEM260-202, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best) BASIC

Gene TMEM260, Length 1,638 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-202ENST00000538838 TSPAN18Q96SJ8 248 aa25.4■■□□□ 1.66
TMEM260-202ENST00000538838 CACNG4Q9UBN1 327 aa25.4■■□□□ 1.66
TMEM260-202ENST00000538838 FSD2A1L4K1 749 aa25.39■■□□□ 1.66
TMEM260-202ENST00000538838 GOLGA6L3A6NEY3 463 aa25.39■■□□□ 1.66
TMEM260-202ENST00000538838 LGALS16A8MUM7 142 aa25.39■■□□□ 1.66
TMEM260-202ENST00000538838 B4GALT3O60512 393 aa25.39■■□□□ 1.66
TMEM260-202ENST00000538838 GJB5O95377 273 aa25.39■■□□□ 1.66
TMEM260-202ENST00000538838 C4BPAP04003 597 aaKnown RBP25.39■■□□□ 1.66
TMEM260-202ENST00000538838 AP3M2P53677 418 aa25.39■■□□□ 1.66
TMEM260-202ENST00000538838 MLLT1Q03111 559 aaPredicted RBP25.39■■□□□ 1.66
TMEM260-202ENST00000538838 ZACNQ401N2 412 aa25.39■■□□□ 1.66
TMEM260-202ENST00000538838 C15orf39Q6ZRI6 1047 aa25.39■■□□□ 1.66
TMEM260-202ENST00000538838 TRAPPC11Q7Z392 1133 aa25.39■■□□□ 1.66
TMEM260-202ENST00000538838 HERC6Q8IVU3 1022 aa25.39■■□□□ 1.66
TMEM260-202ENST00000538838 SLC38A7Q9NVC3 462 aa25.39■■□□□ 1.66
TMEM260-202ENST00000538838 DPP3Q9NY33 737 aa25.39■■□□□ 1.66
TMEM260-202ENST00000538838 LAMA2P24043 3122 aaKnown RBP25.38■■□□□ 1.65
TMEM260-202ENST00000538838 XPOTO43592 962 aaKnown RBP25.38■■□□□ 1.65
TMEM260-202ENST00000538838 RNASELQ05823 741 aaKnown RBP25.38■■□□□ 1.65
TMEM260-202ENST00000538838 UVSSAQ2YD98 709 aa25.38■■□□□ 1.65
TMEM260-202ENST00000538838 KRT39Q6A163 491 aa25.38■■□□□ 1.65
TMEM260-202ENST00000538838 ZNF280BQ86YH2 543 aa25.38■■□□□ 1.65
TMEM260-202ENST00000538838 YME1L1Q96TA2 773 aa25.38■■□□□ 1.65
TMEM260-202ENST00000538838 MRPL9Q9BYD2 267 aaKnown RBP25.38■■□□□ 1.65
TMEM260-202ENST00000538838 IFNKQ9P0W0 207 aa25.38■■□□□ 1.65
TMEM260-202ENST00000538838 KANSL3Q9P2N6 904 aa25.38■■□□□ 1.65
TMEM260-202ENST00000538838 SCN1AP35498 2009 aa25.38■■□□□ 1.65
TMEM260-202ENST00000538838 A0A1B0GTH6 734 aa25.37■■□□□ 1.65
TMEM260-202ENST00000538838 DDHD2O94830 711 aa25.37■■□□□ 1.65
TMEM260-202ENST00000538838 ITGB3P05106 788 aa25.37■■□□□ 1.65
TMEM260-202ENST00000538838 LRRC43Q8N309 656 aa25.37■■□□□ 1.65
TMEM260-202ENST00000538838 PHOSPHO2Q8TCD6 241 aa25.37■■□□□ 1.65
TMEM260-202ENST00000538838 SIX4Q9UIU6 781 aa25.37■■□□□ 1.65
TMEM260-202ENST00000538838 CASTOR2A6NHX0 329 aa25.37■■□□□ 1.65
TMEM260-202ENST00000538838 N4BP1O75113 896 aaKnown RBP25.37■■□□□ 1.65
TMEM260-202ENST00000538838 PHACTR2O75167 634 aa25.37■■□□□ 1.65
TMEM260-202ENST00000538838 VNN1O95497 513 aa25.37■■□□□ 1.65
TMEM260-202ENST00000538838 UBASH3AP57075 661 aa25.37■■□□□ 1.65
TMEM260-202ENST00000538838 RSPH1Q8WYR4 309 aa25.37■■□□□ 1.65
TMEM260-202ENST00000538838 ZBED2Q9BTP6 218 aa25.37■■□□□ 1.65
TMEM260-202ENST00000538838 RTN4Q9NQC3 1192 aaKnown RBP25.37■■□□□ 1.65
TMEM260-202ENST00000538838 PPEF2O14830 753 aa25.36■■□□□ 1.65
TMEM260-202ENST00000538838 CYP3A5P20815 502 aa25.36■■□□□ 1.65
TMEM260-202ENST00000538838 POLR2BP30876 1174 aaKnown RBP25.36■■□□□ 1.65
TMEM260-202ENST00000538838 PIK3CAP42336 1068 aa25.36■■□□□ 1.65
TMEM260-202ENST00000538838 HTRA4P83105 476 aaPredicted RBP25.36■■□□□ 1.65
TMEM260-202ENST00000538838 DSC1Q08554 894 aa25.36■■□□□ 1.65
TMEM260-202ENST00000538838 TUSC3Q13454 348 aa25.36■■□□□ 1.65
TMEM260-202ENST00000538838 GSE1Q14687 1217 aa25.36■■□□□ 1.65
TMEM260-202ENST00000538838 PTPN21Q16825 1174 aa25.36■■□□□ 1.65
TMEM260-202ENST00000538838 FILIP1LQ4L180 1135 aa25.36■■□□□ 1.65
TMEM260-202ENST00000538838 SARM1Q6SZW1 724 aa25.36■■□□□ 1.65
TMEM260-202ENST00000538838 CXorf38Q8TB03 319 aa25.36■■□□□ 1.65
TMEM260-202ENST00000538838 TAS1R2Q8TE23 839 aa25.36■■□□□ 1.65
TMEM260-202ENST00000538838 XPO4Q9C0E2 1151 aaKnown RBP25.36■■□□□ 1.65
TMEM260-202ENST00000538838 GRPEL1Q9HAV7 217 aa25.36■■□□□ 1.65
TMEM260-202ENST00000538838 DNAJB4Q9UDY4 337 aa25.36■■□□□ 1.65
TMEM260-202ENST00000538838 ITGA11Q9UKX5 1188 aa25.36■■□□□ 1.65
TMEM260-202ENST00000538838 RANBP2P49792 3224 aaKnown RBP25.35■■□□□ 1.65
TMEM260-202ENST00000538838 TEX33O43247 280 aa25.35■■□□□ 1.65
TMEM260-202ENST00000538838 KRT19P08727 400 aa25.35■■□□□ 1.65
TMEM260-202ENST00000538838 FAM109BQ6ICB4 259 aaPredicted RBP25.35■■□□□ 1.65
TMEM260-202ENST00000538838 CMTR2Q8IYT2 770 aaKnown RBP25.35■■□□□ 1.65
TMEM260-202ENST00000538838 RABGGTAQ92696 567 aa25.35■■□□□ 1.65
TMEM260-202ENST00000538838 FAM193BQ96PV7 902 aaPredicted RBP25.35■■□□□ 1.65
TMEM260-202ENST00000538838 PAAF1Q9BRP4 392 aa25.35■■□□□ 1.65
TMEM260-202ENST00000538838 CRACR2AQ9BSW2 395 aa25.35■■□□□ 1.65
TMEM260-202ENST00000538838 NRDE2Q9H7Z3 1164 aa25.35■■□□□ 1.65
TMEM260-202ENST00000538838 LRRN2O75325 713 aa25.34■■□□□ 1.65
TMEM260-202ENST00000538838 CST3P01034 146 aaPredicted RBP25.34■■□□□ 1.65
TMEM260-202ENST00000538838 HLA-DRAP01903 254 aa25.34■■□□□ 1.65
TMEM260-202ENST00000538838 LRPAP1P30533 357 aa25.34■■□□□ 1.65
TMEM260-202ENST00000538838 UBXN1Q04323 297 aa25.34■■□□□ 1.65
TMEM260-202ENST00000538838 NCOA4Q13772 614 aa25.34■■□□□ 1.65
TMEM260-202ENST00000538838 BTG3Q14201 252 aaPredicted RBP25.34■■□□□ 1.65
TMEM260-202ENST00000538838 EPC2Q52LR7 807 aa25.34■■□□□ 1.65
TMEM260-202ENST00000538838 FKBP15Q5T1M5 1219 aa25.34■■□□□ 1.65
TMEM260-202ENST00000538838 C9orf57Q5W0N0 161 aa25.34■■□□□ 1.65
TMEM260-202ENST00000538838 NLRC5Q86WI3 1866 aa25.34■■□□□ 1.65
TMEM260-202ENST00000538838 COLGALT2Q8IYK4 626 aa25.34■■□□□ 1.65
TMEM260-202ENST00000538838 SEMA4DQ92854 862 aa25.34■■□□□ 1.65
TMEM260-202ENST00000538838 GCNT4Q9P109 453 aa25.34■■□□□ 1.65
TMEM260-202ENST00000538838 AGAP1Q9UPQ3 857 aa25.34■■□□□ 1.65
TMEM260-202ENST00000538838 GRXCR1A8MXD5 290 aa25.34■■□□□ 1.65
TMEM260-202ENST00000538838 PMM2O15305 246 aa25.34■■□□□ 1.65
TMEM260-202ENST00000538838 P4HA2O15460 535 aa25.34■■□□□ 1.65
TMEM260-202ENST00000538838 ZC3H11AO75152 810 aaKnown RBP eCLIP25.34■■□□□ 1.65
TMEM260-202ENST00000538838 CLCNKBP51801 687 aa25.34■■□□□ 1.65
TMEM260-202ENST00000538838 FBXL13Q8NEE6 735 aa25.34■■□□□ 1.65
TMEM260-202ENST00000538838 ELMO3Q96BJ8 720 aa25.34■■□□□ 1.65
TMEM260-202ENST00000538838 CWH43Q9H720 699 aa25.34■■□□□ 1.65
TMEM260-202ENST00000538838 UTP3Q9NQZ2 479 aaKnown RBP eCLIP25.34■■□□□ 1.65
TMEM260-202ENST00000538838 COQ4Q9Y3A0 265 aa25.34■■□□□ 1.65
TMEM260-202ENST00000538838 TLL1O43897 1013 aa25.33■■□□□ 1.65
TMEM260-202ENST00000538838 BMP8BP34820 402 aa25.33■■□□□ 1.65
TMEM260-202ENST00000538838 RABGGTBP53611 331 aa25.33■■□□□ 1.65
TMEM260-202ENST00000538838 TRPC3Q13507 836 aa25.33■■□□□ 1.65
TMEM260-202ENST00000538838 NR1I3Q14994 352 aa25.33■■□□□ 1.65
TMEM260-202ENST00000538838 INSL6Q9Y581 213 aa25.33■■□□□ 1.65
TMEM260-202ENST00000538838 GTF3C5Q9Y5Q8 519 aaPredicted RBP25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms