RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 NUP58Q9BVL2 599 aa15.26■□□□□ 0.03
CD4-208ENST00000538827 PLEKHA5Q9HAU0 1116 aa15.26■□□□□ 0.03
CD4-208ENST00000538827 RGS18Q9NS28 235 aa15.26■□□□□ 0.03
CD4-208ENST00000538827 C1orf112Q9NSG2 853 aa15.26■□□□□ 0.03
CD4-208ENST00000538827 CNTN3Q9P232 1028 aa15.26■□□□□ 0.03
CD4-208ENST00000538827 LTBP2Q14767 1821 aa15.26■□□□□ 0.03
CD4-208ENST00000538827 NCOR1O75376 2440 aa15.26■□□□□ 0.03
CD4-208ENST00000538827 MEIS3P2A8K0S8 358 aa15.25■□□□□ 0.03
CD4-208ENST00000538827 KIAA0355O15063 1070 aa15.25■□□□□ 0.03
CD4-208ENST00000538827 EPHB6O15197 1021 aa15.25■□□□□ 0.03
CD4-208ENST00000538827 TIMP1P01033 207 aa15.25■□□□□ 0.03
CD4-208ENST00000538827 C4BPAP04003 597 aaKnown RBP15.25■□□□□ 0.03
CD4-208ENST00000538827 GYPCP04921 128 aa15.25■□□□□ 0.03
CD4-208ENST00000538827 RFC2P35250 354 aa15.25■□□□□ 0.03
CD4-208ENST00000538827 GSDMDP57764 484 aa15.25■□□□□ 0.03
CD4-208ENST00000538827 CLDN10P78369 228 aa15.25■□□□□ 0.03
CD4-208ENST00000538827 TRPC3Q13507 836 aa15.25■□□□□ 0.03
CD4-208ENST00000538827 RAPGEF1Q13905 1077 aa15.25■□□□□ 0.03
CD4-208ENST00000538827 GPNMBQ14956 572 aa15.25■□□□□ 0.03
CD4-208ENST00000538827 TCTN1Q2MV58 587 aa15.25■□□□□ 0.03
CD4-208ENST00000538827 TRAPPC11Q7Z392 1133 aa15.25■□□□□ 0.03
CD4-208ENST00000538827 TMEM130Q8N3G9 435 aa15.25■□□□□ 0.03
CD4-208ENST00000538827 CCDC150Q8NCX0 1101 aa15.25■□□□□ 0.03
CD4-208ENST00000538827 SEMA4DQ92854 862 aa15.25■□□□□ 0.03
CD4-208ENST00000538827 NT5C1BQ96P26 610 aa15.25■□□□□ 0.03
CD4-208ENST00000538827 PI4K2AQ9BTU6 479 aa15.25■□□□□ 0.03
CD4-208ENST00000538827 CXCL16Q9H2A7 254 aa15.25■□□□□ 0.03
CD4-208ENST00000538827 GANQ9H2C0 597 aa15.25■□□□□ 0.03
CD4-208ENST00000538827 TTYH1Q9H313 450 aaPredicted RBP15.25■□□□□ 0.03
CD4-208ENST00000538827 RSAD1Q9HA92 442 aa15.25■□□□□ 0.03
CD4-208ENST00000538827 NLRC4Q9NPP4 1024 aa15.25■□□□□ 0.03
CD4-208ENST00000538827 RAB20Q9NX57 234 aa15.25■□□□□ 0.03
CD4-208ENST00000538827 TUBGCP4Q9UGJ1 667 aa15.25■□□□□ 0.03
CD4-208ENST00000538827 INPP5FQ9Y2H2 1132 aa15.25■□□□□ 0.03
CD4-208ENST00000538827 R3HCC1Q9Y3T6 440 aaKnown RBP15.25■□□□□ 0.03
CD4-208ENST00000538827 A0A0U1RQF3 1178 aa15.24■□□□□ 0.03
CD4-208ENST00000538827 AKR1B15C9JRZ8 316 aaPredicted RBP15.24■□□□□ 0.03
CD4-208ENST00000538827 XPOTO43592 962 aaKnown RBP15.24■□□□□ 0.03
CD4-208ENST00000538827 MFAP3LO75121 409 aa15.24■□□□□ 0.03
CD4-208ENST00000538827 VNN1O95497 513 aa15.24■□□□□ 0.03
CD4-208ENST00000538827 CXCL10P02778 98 aa15.24■□□□□ 0.03
CD4-208ENST00000538827 ITGB3P05106 788 aa15.24■□□□□ 0.03
CD4-208ENST00000538827 ATF7P17544 494 aaPredicted RBP15.24■□□□□ 0.03
CD4-208ENST00000538827 CASP14P31944 242 aa15.24■□□□□ 0.03
CD4-208ENST00000538827 POLR2FP61218 127 aaKnown RBP15.24■□□□□ 0.03
CD4-208ENST00000538827 TBX2Q13207 712 aaPredicted RBP15.24■□□□□ 0.03
CD4-208ENST00000538827 NCOA4Q13772 614 aa15.24■□□□□ 0.03
CD4-208ENST00000538827 CNKSR3Q6P9H4 555 aa15.24■□□□□ 0.03
CD4-208ENST00000538827 GJB7Q6PEY0 223 aa15.24■□□□□ 0.03
CD4-208ENST00000538827 C15orf39Q6ZRI6 1047 aa15.24■□□□□ 0.03
CD4-208ENST00000538827 SLC24A5Q71RS6 500 aa15.24■□□□□ 0.03
CD4-208ENST00000538827 GPIHBP1Q8IV16 184 aa15.24■□□□□ 0.03
CD4-208ENST00000538827 ARHGEF19Q8IW93 802 aa15.24■□□□□ 0.03
CD4-208ENST00000538827 TMEM199Q8N511 208 aa15.24■□□□□ 0.03
CD4-208ENST00000538827 EHBP1Q8NDI1 1231 aa15.24■□□□□ 0.03
CD4-208ENST00000538827 BEST2Q8NFU1 509 aa15.24■□□□□ 0.03
CD4-208ENST00000538827 ELMO3Q96BJ8 720 aa15.24■□□□□ 0.03
CD4-208ENST00000538827 ZFP42Q96MM3 310 aa15.24■□□□□ 0.03
CD4-208ENST00000538827 GAD1Q99259 594 aa15.24■□□□□ 0.03
CD4-208ENST00000538827 IMPG2Q9BZV3 1241 aa15.24■□□□□ 0.03
CD4-208ENST00000538827 TSPYL2Q9H2G4 693 aaPredicted RBP15.24■□□□□ 0.03
CD4-208ENST00000538827 SIX2Q9NPC8 291 aa15.24■□□□□ 0.03
CD4-208ENST00000538827 CEP72Q9P209 647 aa15.24■□□□□ 0.03
CD4-208ENST00000538827 LRFN2Q9ULH4 789 aa15.24■□□□□ 0.03
CD4-208ENST00000538827 DERAQ9Y315 318 aa15.24■□□□□ 0.03
CD4-208ENST00000538827 C2CD2Q9Y426 696 aa15.24■□□□□ 0.03
CD4-208ENST00000538827 FHOD1Q9Y613 1164 aa15.24■□□□□ 0.03
CD4-208ENST00000538827 C9IYK1 514 aa15.23■□□□□ 0.03
CD4-208ENST00000538827 PMM2O15305 246 aa15.23■□□□□ 0.03
CD4-208ENST00000538827 LRRN2O75325 713 aa15.23■□□□□ 0.03
CD4-208ENST00000538827 ITGB8P26012 769 aa15.23■□□□□ 0.03
CD4-208ENST00000538827 POLR2BP30876 1174 aaKnown RBP15.23■□□□□ 0.03
CD4-208ENST00000538827 SCNN1GP51170 649 aa15.23■□□□□ 0.03
CD4-208ENST00000538827 ADKP55263 362 aaKnown RBP15.23■□□□□ 0.03
CD4-208ENST00000538827 MCCD1P59942 119 aaPredicted RBP15.23■□□□□ 0.03
CD4-208ENST00000538827 ARID5BQ14865 1188 aa15.23■□□□□ 0.03
CD4-208ENST00000538827 SHHQ15465 462 aa15.23■□□□□ 0.03
CD4-208ENST00000538827 ZNF699Q32M78 642 aa15.23■□□□□ 0.03
CD4-208ENST00000538827 WDR44Q5JSH3 913 aa15.23■□□□□ 0.03
CD4-208ENST00000538827 KLHDC7AQ5VTJ3 777 aa15.23■□□□□ 0.03
CD4-208ENST00000538827 AGMOQ6ZNB7 445 aa15.23■□□□□ 0.03
CD4-208ENST00000538827 MRPL10Q7Z7H8 261 aaKnown RBP15.23■□□□□ 0.03
CD4-208ENST00000538827 RTN4RL1Q86UN2 441 aaPredicted RBP15.23■□□□□ 0.03
CD4-208ENST00000538827 NT5DC4Q86YG4 428 aa15.23■□□□□ 0.03
CD4-208ENST00000538827 PPM1KQ8N3J5 372 aa15.23■□□□□ 0.03
CD4-208ENST00000538827 C1orf127Q8N9H9 656 aa15.23■□□□□ 0.03
CD4-208ENST00000538827 ATXN2LQ8WWM7 1075 aaKnown RBP15.23■□□□□ 0.03
CD4-208ENST00000538827 C18orf25Q96B23 403 aaPredicted RBP15.23■□□□□ 0.03
CD4-208ENST00000538827 TRIM44Q96DX7 344 aaPredicted RBP15.23■□□□□ 0.03
CD4-208ENST00000538827 IQCDQ96DY2 449 aa15.23■□□□□ 0.03
CD4-208ENST00000538827 ZMAT2Q96NC0 199 aaKnown RBP15.23■□□□□ 0.03
CD4-208ENST00000538827 TRAIPQ9BWF2 469 aa15.23■□□□□ 0.03
CD4-208ENST00000538827 PLCB1Q9NQ66 1216 aa15.23■□□□□ 0.03
CD4-208ENST00000538827 DPP3Q9NY33 737 aa15.23■□□□□ 0.03
CD4-208ENST00000538827 AJAP1Q9UKB5 411 aaPredicted RBP15.23■□□□□ 0.03
CD4-208ENST00000538827 UBQLN1Q9UMX0 589 aaKnown RBP15.23■□□□□ 0.03
CD4-208ENST00000538827 GIT1Q9Y2X7 761 aa15.23■□□□□ 0.03
CD4-208ENST00000538827 SMIM28A0A1B0GU29 152 aa15.22■□□□□ 0.03
CD4-208ENST00000538827 A0A1W2PQJ5 194 aa15.22■□□□□ 0.03
CD4-208ENST00000538827 ZNF623O75123 536 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms