RNA–Protein interactions for RNA: ENST00000538243.1

KDM2B-207, Transcript of lysine demethylase 2B, humanhuman

TSL 2

Gene KDM2B, Length 4,110 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2B-207ENST00000538243 GRIK5Q16478 980 aa17.31■□□□□ 0.36
KDM2B-207ENST00000538243 ZNF341Q9BYN7 854 aa17.31■□□□□ 0.36
KDM2B-207ENST00000538243 VPS11Q9H270 941 aa17.31■□□□□ 0.36
KDM2B-207ENST00000538243 TUFT1Q9NNX1 390 aa17.31■□□□□ 0.36
KDM2B-207ENST00000538243 GABBR1Q9UBS5 961 aa17.31■□□□□ 0.36
KDM2B-207ENST00000538243 LOC100653049A0A140TA62 436 aa17.3■□□□□ 0.36
KDM2B-207ENST00000538243 KRT34O76011 436 aa17.3■□□□□ 0.36
KDM2B-207ENST00000538243 NFIAQ12857 509 aa17.3■□□□□ 0.36
KDM2B-207ENST00000538243 CBWD6Q4V339 395 aa17.3■□□□□ 0.36
KDM2B-207ENST00000538243 TAF1BQ53T94 588 aaPredicted RBP17.3■□□□□ 0.36
KDM2B-207ENST00000538243 CBWD3Q5JTY5 395 aa17.3■□□□□ 0.36
KDM2B-207ENST00000538243 CBWD5Q5RIA9 395 aa17.3■□□□□ 0.36
KDM2B-207ENST00000538243 SCFD2Q8WU76 684 aa17.3■□□□□ 0.36
KDM2B-207ENST00000538243 MTBPQ96DY7 904 aa17.3■□□□□ 0.36
KDM2B-207ENST00000538243 MTMR9Q96QG7 549 aa17.3■□□□□ 0.36
KDM2B-207ENST00000538243 FOXO6A8MYZ6 492 aa17.3■□□□□ 0.36
KDM2B-207ENST00000538243 NKRFO15226 690 aaKnown RBP eCLIP17.3■□□□□ 0.36
KDM2B-207ENST00000538243 KRT38O76015 456 aa17.3■□□□□ 0.36
KDM2B-207ENST00000538243 ECE1P42892 770 aa17.3■□□□□ 0.36
KDM2B-207ENST00000538243 PPP4CP60510 307 aa17.3■□□□□ 0.36
KDM2B-207ENST00000538243 TBC1D16Q8TBP0 767 aa17.3■□□□□ 0.36
KDM2B-207ENST00000538243 ATXN7L3BQ96GX2 97 aa17.3■□□□□ 0.36
KDM2B-207ENST00000538243 PPP1R36Q96LQ0 422 aa17.3■□□□□ 0.36
KDM2B-207ENST00000538243 LRGUKQ96M69 825 aa17.3■□□□□ 0.36
KDM2B-207ENST00000538243 KCNG1Q9UIX4 513 aa17.3■□□□□ 0.36
KDM2B-207ENST00000538243 PRR12Q9ULL5 1215 aa17.3■□□□□ 0.36
KDM2B-207ENST00000538243 INPP5FQ9Y2H2 1132 aa17.3■□□□□ 0.36
KDM2B-207ENST00000538243 A0A0A6YYK5 440 aaPredicted RBP17.3■□□□□ 0.36
KDM2B-207ENST00000538243 KRT80Q6KB66 452 aa17.3■□□□□ 0.36
KDM2B-207ENST00000538243 ARID3BQ8IVW6 561 aaPredicted RBP17.3■□□□□ 0.36
KDM2B-207ENST00000538243 LINC00116Q8NCU8 138 aa17.3■□□□□ 0.36
KDM2B-207ENST00000538243 MCUQ8NE86 351 aa17.3■□□□□ 0.36
KDM2B-207ENST00000538243 NLRP7Q8WX94 980 aa17.3■□□□□ 0.36
KDM2B-207ENST00000538243 MCEEQ96PE7 176 aa17.3■□□□□ 0.36
KDM2B-207ENST00000538243 GPC4O75487 556 aa17.29■□□□□ 0.36
KDM2B-207ENST00000538243 DNAJC8O75937 253 aaPredicted RBP17.29■□□□□ 0.36
KDM2B-207ENST00000538243 YWHABP31946 246 aaKnown RBP17.29■□□□□ 0.36
KDM2B-207ENST00000538243 SWSAP1Q6NVH7 229 aa17.29■□□□□ 0.36
KDM2B-207ENST00000538243 C1orf228Q6PIY5 440 aa17.29■□□□□ 0.36
KDM2B-207ENST00000538243 ALG3Q92685 438 aa17.29■□□□□ 0.36
KDM2B-207ENST00000538243 PURBQ96QR8 312 aaKnown RBP17.29■□□□□ 0.36
KDM2B-207ENST00000538243 TRIM56Q9BRZ2 755 aaKnown RBP17.29■□□□□ 0.36
KDM2B-207ENST00000538243 GANQ9H2C0 597 aa17.29■□□□□ 0.36
KDM2B-207ENST00000538243 IP6K2Q9UHH9 426 aa17.29■□□□□ 0.36
KDM2B-207ENST00000538243 USP21Q9UK80 565 aa17.29■□□□□ 0.36
KDM2B-207ENST00000538243 ZBTB12Q9Y330 459 aaPredicted RBP17.29■□□□□ 0.36
KDM2B-207ENST00000538243 NR2E1Q9Y466 385 aa17.29■□□□□ 0.36
KDM2B-207ENST00000538243 TISP43B9A030 160 aa17.29■□□□□ 0.36
KDM2B-207ENST00000538243 KIAA0391O15091 583 aaKnown RBP17.29■□□□□ 0.36
KDM2B-207ENST00000538243 TBX3O15119 743 aa17.29■□□□□ 0.36
KDM2B-207ENST00000538243 CREB3O43889 395 aa17.29■□□□□ 0.36
KDM2B-207ENST00000538243 MAP3K6O95382 1288 aa17.29■□□□□ 0.36
KDM2B-207ENST00000538243 PSMC1P62191 440 aaKnown RBP17.29■□□□□ 0.36
KDM2B-207ENST00000538243 ECM1Q16610 540 aa17.29■□□□□ 0.36
KDM2B-207ENST00000538243 TMEM119Q4V9L6 283 aa17.29■□□□□ 0.36
KDM2B-207ENST00000538243 FAM111AQ96PZ2 611 aa17.29■□□□□ 0.36
KDM2B-207ENST00000538243 MPHOSPH6Q99547 160 aaKnown RBP17.29■□□□□ 0.36
KDM2B-207ENST00000538243 E2F8A0AVK6 867 aa17.29■□□□□ 0.36
KDM2B-207ENST00000538243 FECHP22830 423 aa17.29■□□□□ 0.36
KDM2B-207ENST00000538243 AUHQ13825 339 aaKnown RBP17.29■□□□□ 0.36
KDM2B-207ENST00000538243 IRF2BP2Q7Z5L9 587 aa17.29■□□□□ 0.36
KDM2B-207ENST00000538243 TRIML2Q8N7C3 387 aa17.29■□□□□ 0.36
KDM2B-207ENST00000538243 RANBP17Q9H2T7 1088 aaKnown RBP17.29■□□□□ 0.36
KDM2B-207ENST00000538243 CHST7Q9NS84 486 aa17.29■□□□□ 0.36
KDM2B-207ENST00000538243 SEC23IPQ9Y6Y8 1000 aaKnown RBP17.29■□□□□ 0.36
KDM2B-207ENST00000538243 CRCPO75575 148 aa17.28■□□□□ 0.36
KDM2B-207ENST00000538243 APRTP07741 180 aa17.28■□□□□ 0.36
KDM2B-207ENST00000538243 SMARCA1P28370 1054 aa17.28■□□□□ 0.36
KDM2B-207ENST00000538243 CDC42EP5Q6NZY7 148 aa17.28■□□□□ 0.36
KDM2B-207ENST00000538243 LDHDQ86WU2 507 aa17.28■□□□□ 0.36
KDM2B-207ENST00000538243 HAS1Q92839 578 aa17.28■□□□□ 0.36
KDM2B-207ENST00000538243 MAGEB18Q96M61 343 aa17.28■□□□□ 0.36
KDM2B-207ENST00000538243 TOPORSQ9NS56 1045 aaPredicted RBP17.28■□□□□ 0.36
KDM2B-207ENST00000538243 RBAKQ9NYW8 714 aaPredicted RBP17.28■□□□□ 0.36
KDM2B-207ENST00000538243 CALCAP01258 141 aa17.28■□□□□ 0.36
KDM2B-207ENST00000538243 CNGA2Q16280 664 aa17.28■□□□□ 0.36
KDM2B-207ENST00000538243 HEXIM2Q96MH2 286 aaKnown RBP17.28■□□□□ 0.36
KDM2B-207ENST00000538243 PAGR1Q9BTK6 254 aa17.28■□□□□ 0.36
KDM2B-207ENST00000538243 ERVK-5Q9HDB9 667 aa17.28■□□□□ 0.36
KDM2B-207ENST00000538243 PAPOLBQ9NRJ5 636 aaKnown RBP17.28■□□□□ 0.36
KDM2B-207ENST00000538243 TRAF3IP3Q9Y228 551 aa17.28■□□□□ 0.36
KDM2B-207ENST00000538243 P4HA1P13674 534 aa17.28■□□□□ 0.36
KDM2B-207ENST00000538243 VHLP40337 213 aa17.28■□□□□ 0.36
KDM2B-207ENST00000538243 SLC1A1P43005 524 aa17.28■□□□□ 0.36
KDM2B-207ENST00000538243 RPS6KA2Q15349 733 aa17.28■□□□□ 0.36
KDM2B-207ENST00000538243 APOL6Q9BWW8 343 aa17.28■□□□□ 0.36
KDM2B-207ENST00000538243 UBE4BO95155 1302 aa17.28■□□□□ 0.36
KDM2B-207ENST00000538243 A8MUI8 341 aa17.28■□□□□ 0.36
KDM2B-207ENST00000538243 EIF3DO15371 548 aaKnown RBP eCLIP17.28■□□□□ 0.36
KDM2B-207ENST00000538243 KRT16P08779 473 aa17.28■□□□□ 0.36
KDM2B-207ENST00000538243 CYP11B1P15538 503 aa17.28■□□□□ 0.36
KDM2B-207ENST00000538243 ART3Q13508 389 aa17.28■□□□□ 0.36
KDM2B-207ENST00000538243 NLRP4Q96MN2 994 aa17.28■□□□□ 0.36
KDM2B-207ENST00000538243 RPS6KC1Q96S38 1066 aa17.28■□□□□ 0.36
KDM2B-207ENST00000538243 RTFDC1Q9BY42 306 aaPredicted RBP17.28■□□□□ 0.36
KDM2B-207ENST00000538243 PARVAQ9NVD7 372 aa17.28■□□□□ 0.36
KDM2B-207ENST00000538243 HSPA4LO95757 839 aa17.27■□□□□ 0.36
KDM2B-207ENST00000538243 SH3BGRP55822 239 aaPredicted RBP17.27■□□□□ 0.36
KDM2B-207ENST00000538243 EIF3EP60228 445 aaKnown RBP17.27■□□□□ 0.36
KDM2B-207ENST00000538243 CUL3Q13618 768 aa17.27■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms