RNA–Protein interactions for RNA: ENST00000537965.5

SNHG1-207, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 5

Gene SNHG1, Length 578 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-207ENST00000537965 FANCGO15287 622 aa6.06□□□□□ -1.44
SNHG1-207ENST00000537965 CYTH3O43739 400 aa6.06□□□□□ -1.44
SNHG1-207ENST00000537965 DDAH1O94760 285 aa6.06□□□□□ -1.44
SNHG1-207ENST00000537965 FAM87AP0C7U9 286 aa6.06□□□□□ -1.44
SNHG1-207ENST00000537965 CALM1P0DP23 149 aa6.06□□□□□ -1.44
SNHG1-207ENST00000537965 CALM2P0DP24 149 aa6.06□□□□□ -1.44
SNHG1-207ENST00000537965 CALM3P0DP25 149 aa6.06□□□□□ -1.44
SNHG1-207ENST00000537965 INSRRP14616 1297 aa6.06□□□□□ -1.44
SNHG1-207ENST00000537965 KCNA2P16389 499 aa6.06□□□□□ -1.44
SNHG1-207ENST00000537965 MARK3P27448 753 aa6.06□□□□□ -1.44
SNHG1-207ENST00000537965 CD52P31358 61 aa6.06□□□□□ -1.44
SNHG1-207ENST00000537965 GTF2F1P35269 517 aaKnown RBP eCLIP6.06□□□□□ -1.44
SNHG1-207ENST00000537965 NRIP1P48552 1158 aa6.06□□□□□ -1.44
SNHG1-207ENST00000537965 SARSP49591 514 aaKnown RBP6.06□□□□□ -1.44
SNHG1-207ENST00000537965 RPS26P62854 115 aaKnown RBP6.06□□□□□ -1.44
SNHG1-207ENST00000537965 NUCB1Q02818 461 aa6.06□□□□□ -1.44
SNHG1-207ENST00000537965 TROAPQ12815 778 aa6.06□□□□□ -1.44
SNHG1-207ENST00000537965 PSMD2Q13200 908 aa6.06□□□□□ -1.44
SNHG1-207ENST00000537965 USP17L6PQ6QN14 398 aa6.06□□□□□ -1.44
SNHG1-207ENST00000537965 CASC1Q6TDU7 716 aa6.06□□□□□ -1.44
SNHG1-207ENST00000537965 RUFY4Q6ZNE9 571 aa6.06□□□□□ -1.44
SNHG1-207ENST00000537965 PLPPR4Q7Z2D5 763 aa6.06□□□□□ -1.44
SNHG1-207ENST00000537965 RBM23Q86U06 439 aaKnown RBP6.06□□□□□ -1.44
SNHG1-207ENST00000537965 C12orf40Q86WS4 652 aa6.06□□□□□ -1.44
SNHG1-207ENST00000537965 RASGRP4Q8TDF6 673 aa6.06□□□□□ -1.44
SNHG1-207ENST00000537965 CELF4Q9BZC1 486 aaKnown RBP6.06□□□□□ -1.44
SNHG1-207ENST00000537965 BCAS3Q9H6U6 928 aa6.06□□□□□ -1.44
SNHG1-207ENST00000537965 LRRC4CQ9HCJ2 640 aa6.06□□□□□ -1.44
SNHG1-207ENST00000537965 JADE2Q9NQC1 790 aa6.06□□□□□ -1.44
SNHG1-207ENST00000537965 TLR9Q9NR96 1032 aa6.06□□□□□ -1.44
SNHG1-207ENST00000537965 SLC9A2Q9UBY0 812 aa6.06□□□□□ -1.44
SNHG1-207ENST00000537965 CCDC39Q9UFE4 941 aa6.06□□□□□ -1.44
SNHG1-207ENST00000537965 ZC3H7BQ9UGR2 993 aaKnown RBP6.06□□□□□ -1.44
SNHG1-207ENST00000537965 PADI3Q9ULW8 664 aa6.06□□□□□ -1.44
SNHG1-207ENST00000537965 LZTS1Q9Y250 596 aa6.06□□□□□ -1.44
SNHG1-207ENST00000537965 NR2E1Q9Y466 385 aa6.06□□□□□ -1.44
SNHG1-207ENST00000537965 USP15Q9Y4E8 981 aaPredicted RBP6.06□□□□□ -1.44
SNHG1-207ENST00000537965 MRPL42Q9Y6G3 142 aaKnown RBP6.06□□□□□ -1.44
SNHG1-207ENST00000537965 OAS3Q9Y6K5 1087 aaKnown RBP6.06□□□□□ -1.44
SNHG1-207ENST00000537965 NFASCO94856 1347 aa6.05□□□□□ -1.44
SNHG1-207ENST00000537965 PLXNA3P51805 1871 aa6.05□□□□□ -1.44
SNHG1-207ENST00000537965 DENND3A2RUS2 1198 aa6.05□□□□□ -1.44
SNHG1-207ENST00000537965 LINC01565O15544 149 aa6.05□□□□□ -1.44
SNHG1-207ENST00000537965 HBP1O60381 514 aa6.05□□□□□ -1.44
SNHG1-207ENST00000537965 ATP9AO75110 1047 aa6.05□□□□□ -1.44
SNHG1-207ENST00000537965 FOSP01100 380 aaPredicted RBP6.05□□□□□ -1.44
SNHG1-207ENST00000537965 LAG3P18627 525 aa6.05□□□□□ -1.44
SNHG1-207ENST00000537965 AVPR2P30518 371 aa6.05□□□□□ -1.44
SNHG1-207ENST00000537965 PPM1AP35813 382 aa6.05□□□□□ -1.44
SNHG1-207ENST00000537965 STAT5BP51692 787 aa6.05□□□□□ -1.44
SNHG1-207ENST00000537965 IGBP1P78318 339 aa6.05□□□□□ -1.44
SNHG1-207ENST00000537965 KRT17Q04695 432 aa6.05□□□□□ -1.44
SNHG1-207ENST00000537965 CAMK1Q14012 370 aa6.05□□□□□ -1.44
SNHG1-207ENST00000537965 INPP5AQ14642 412 aa6.05□□□□□ -1.44
SNHG1-207ENST00000537965 PAN2Q504Q3 1202 aaKnown RBP6.05□□□□□ -1.44
SNHG1-207ENST00000537965 MARCH8Q5T0T0 291 aa6.05□□□□□ -1.44
SNHG1-207ENST00000537965 ZBTB37Q5TC79 503 aa6.05□□□□□ -1.44
SNHG1-207ENST00000537965 FAM160B1Q5W0V3 765 aa6.05□□□□□ -1.44
SNHG1-207ENST00000537965 CES5AQ6NT32 575 aa6.05□□□□□ -1.44
SNHG1-207ENST00000537965 TMEM184AQ6ZMB5 413 aa6.05□□□□□ -1.44
SNHG1-207ENST00000537965 SLC24A5Q71RS6 500 aa6.05□□□□□ -1.44
SNHG1-207ENST00000537965 RTN4RL1Q86UN2 441 aaPredicted RBP6.05□□□□□ -1.44
SNHG1-207ENST00000537965 UBALD2Q8IYN6 164 aa6.05□□□□□ -1.44
SNHG1-207ENST00000537965 THNSL1Q8IYQ7 743 aa6.05□□□□□ -1.44
SNHG1-207ENST00000537965 PRSS33Q8NF86 280 aa6.05□□□□□ -1.44
SNHG1-207ENST00000537965 IGDCC4Q8TDY8 1250 aa6.05□□□□□ -1.44
SNHG1-207ENST00000537965 ATP8B4Q8TF62 1192 aa6.05□□□□□ -1.44
SNHG1-207ENST00000537965 PIBF1Q8WXW3 757 aa6.05□□□□□ -1.44
SNHG1-207ENST00000537965 RSPH1Q8WYR4 309 aa6.05□□□□□ -1.44
SNHG1-207ENST00000537965 ATOH1Q92858 354 aaPredicted RBP6.05□□□□□ -1.44
SNHG1-207ENST00000537965 GAL3ST3Q96A11 431 aa6.05□□□□□ -1.44
SNHG1-207ENST00000537965 TMEM87BQ96K49 555 aa6.05□□□□□ -1.44
SNHG1-207ENST00000537965 RPGRIP1Q96KN7 1286 aa6.05□□□□□ -1.44
SNHG1-207ENST00000537965 DUSP23Q9BVJ7 150 aa6.05□□□□□ -1.44
SNHG1-207ENST00000537965 FAM49AQ9H0Q0 323 aaPredicted RBP6.05□□□□□ -1.44
SNHG1-207ENST00000537965 GLT8D2Q9H1C3 349 aa6.05□□□□□ -1.44
SNHG1-207ENST00000537965 ELAC1Q9H777 363 aaKnown RBP6.05□□□□□ -1.44
SNHG1-207ENST00000537965 AGO3Q9H9G7 860 aaKnown RBP6.05□□□□□ -1.44
SNHG1-207ENST00000537965 NGRNQ9NPE2 291 aaKnown RBP6.05□□□□□ -1.44
SNHG1-207ENST00000537965 TMEM260Q9NX78 707 aa6.05□□□□□ -1.44
SNHG1-207ENST00000537965 CLEC1BQ9P126 229 aa6.05□□□□□ -1.44
SNHG1-207ENST00000537965 UBIAD1Q9Y5Z9 338 aa6.05□□□□□ -1.44
SNHG1-207ENST00000537965 VPS13AQ96RL7 3174 aa6.05□□□□□ -1.44
SNHG1-207ENST00000537965 COL1A2P08123 1366 aa6.05□□□□□ -1.44
SNHG1-207ENST00000537965 FANCMQ8IYD8 2048 aa6.04□□□□□ -1.44
SNHG1-207ENST00000537965 EP300Q09472 2414 aaPredicted RBP6.04□□□□□ -1.44
SNHG1-207ENST00000537965 CCDC69A6NI79 296 aa6.04□□□□□ -1.44
SNHG1-207ENST00000537965 E7EWF7 191 aa6.04□□□□□ -1.44
SNHG1-207ENST00000537965 RPS6KA5O75582 802 aa6.04□□□□□ -1.44
SNHG1-207ENST00000537965 LEFTY1O75610 366 aa6.04□□□□□ -1.44
SNHG1-207ENST00000537965 FGF18O76093 207 aa6.04□□□□□ -1.44
SNHG1-207ENST00000537965 CSPG5O95196 566 aa6.04□□□□□ -1.44
SNHG1-207ENST00000537965 CYP21A2P08686 494 aa6.04□□□□□ -1.44
SNHG1-207ENST00000537965 ITGB5P18084 799 aa6.04□□□□□ -1.44
SNHG1-207ENST00000537965 DNAJB1P25685 340 aa6.04□□□□□ -1.44
SNHG1-207ENST00000537965 KLRC1P26715 233 aa6.04□□□□□ -1.44
SNHG1-207ENST00000537965 MCM5P33992 734 aa6.04□□□□□ -1.44
SNHG1-207ENST00000537965 ST13P50502 369 aaKnown RBP6.04□□□□□ -1.44
SNHG1-207ENST00000537965 ITIH3Q06033 890 aa6.04□□□□□ -1.44
SNHG1-207ENST00000537965 PTPN21Q16825 1174 aa6.04□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms