RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 CNBD1Q8NA66 436 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 VPS39Q96JC1 886 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 SCN3BQ9NY72 215 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 COPG2Q9UBF2 871 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 ZC3H7BQ9UGR2 993 aaKnown RBP5.95□□□□□ -1.46
CSMD1-215ENST00000537824 DNAJC12Q9UKB3 198 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 DENND2AQ9ULE3 1009 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 HPS5Q9UPZ3 1129 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 CARD8Q9Y2G2 431 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 RBMX2Q9Y388 322 aaKnown RBP5.95□□□□□ -1.46
CSMD1-215ENST00000537824 MEI4A8MW99 385 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 HNRNPDLO14979 420 aaKnown RBP5.95□□□□□ -1.46
CSMD1-215ENST00000537824 ASAP2O43150 1006 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 KLHL41O60662 606 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 ITGA6P23229 1130 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 SWT1Q5T5J6 900 aaKnown RBP5.95□□□□□ -1.46
CSMD1-215ENST00000537824 AHI1Q8N157 1196 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 CELF4Q9BZC1 486 aaKnown RBP5.95□□□□□ -1.46
CSMD1-215ENST00000537824 HEY1Q9Y5J3 304 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 TRIM13O60858 407 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 CALB1P05937 261 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 FAM58BPP0C7Q3 252 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 ATXN8OSP0DMR3 200 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 CBX3Q13185 183 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 ZNF554Q86TJ5 538 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 NFATC2IPQ8NCF5 419 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 TTC8Q8TAM2 541 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 ZNF564Q8TBZ8 553 aaPredicted RBP5.95□□□□□ -1.46
CSMD1-215ENST00000537824 ABHD8Q96I13 439 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 USP44Q9H0E7 712 aa5.95□□□□□ -1.46
CSMD1-215ENST00000537824 KLHL18O94889 574 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 KCNJ2P63252 427 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 ALKBH8Q96BT7 664 aaKnown RBP5.94□□□□□ -1.46
CSMD1-215ENST00000537824 UBE2OQ9C0C9 1292 aaKnown RBP5.94□□□□□ -1.46
CSMD1-215ENST00000537824 ARHGEF38Q9NXL2 777 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 RNF103O00237 685 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 VIL1P09327 827 aaKnown RBP5.94□□□□□ -1.46
CSMD1-215ENST00000537824 POTEIP0CG38 1075 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 TOB2Q14106 344 aaPredicted RBP5.94□□□□□ -1.46
CSMD1-215ENST00000537824 C6orf10Q5SRN2 563 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 MARK2Q7KZI7 788 aaKnown RBP5.94□□□□□ -1.46
CSMD1-215ENST00000537824 FAM162AQ96A26 154 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 OSBPL10Q9BXB5 764 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 GPHNQ9NQX3 736 aaPredicted RBP5.94□□□□□ -1.46
CSMD1-215ENST00000537824 TFR2Q9UP52 801 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 MROH7Q68CQ1 1323 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 RAPGEF3O95398 923 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 AKAP4Q5JQC9 854 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 SPANXN2Q5MJ10 180 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 TRAPPC11Q7Z392 1133 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 PNMA1Q8ND90 353 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 FAM89AQ96GI7 184 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 C14orf93Q9H972 538 aaKnown RBP5.94□□□□□ -1.46
CSMD1-215ENST00000537824 ABCF3Q9NUQ8 709 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 TMOD4Q9NZQ9 345 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 MYLKQ15746 1914 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 RAD51BO15315 384 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 PLXNB1O43157 2135 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 EPHB2P29323 1055 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 PTK7Q13308 1070 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 XKR9Q5GH70 373 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 ZMYM1Q5SVZ6 1142 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 GLG1Q92896 1179 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 PACSIN1Q9BY11 444 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 FLT4P35916 1363 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 AKAP11Q9UKA4 1901 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 TYK2P29597 1187 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 FMR1Q06787 632 aaKnown RBP eCLIP5.94□□□□□ -1.46
CSMD1-215ENST00000537824 FAM83BQ5T0W9 1011 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 MTDHQ86UE4 582 aaKnown RBP5.94□□□□□ -1.46
CSMD1-215ENST00000537824 TINF2Q9BSI4 451 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 GCOM2Q9BZD3 368 aaPredicted RBP5.94□□□□□ -1.46
CSMD1-215ENST00000537824 TSR3Q9UJK0 312 aaKnown RBP5.94□□□□□ -1.46
CSMD1-215ENST00000537824 ACEP12821 1306 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 SYNDIG1LA6NDD5 238 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 TNFAIP8O95379 198 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 ATG14Q6ZNE5 492 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 CCDC28BQ9BUN5 200 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 CEP44Q9C0F1 390 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 TMBIM4Q9HC24 238 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 NPATQ14207 1427 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 A0A1B0GTH6 734 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 CCDC189A1A4V9 331 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 PSMD14O00487 310 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 SOX6P35712 828 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 AASDHQ4L235 1098 aaPredicted RBP5.94□□□□□ -1.46
CSMD1-215ENST00000537824 ISLR2Q6UXK2 745 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 JAMLQ86YT9 394 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 THEMISQ8N1K5 641 aaPredicted RBP5.94□□□□□ -1.46
CSMD1-215ENST00000537824 PLEKHG4BQ96PX9 1271 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 CLEC4MQ9H2X3 399 aaPredicted RBP5.94□□□□□ -1.46
CSMD1-215ENST00000537824 PCDH11YQ9BZA8 1340 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 ADCY6O43306 1168 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 CD58P19256 250 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 PTGS2P35354 604 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 PTPN12Q05209 780 aaKnown RBP5.94□□□□□ -1.46
CSMD1-215ENST00000537824 RASA2Q15283 850 aa5.94□□□□□ -1.46
CSMD1-215ENST00000537824 ARL6IP4Q66PJ3 421 aaKnown RBP5.94□□□□□ -1.46
CSMD1-215ENST00000537824 TRMT2AQ8IZ69 625 aaKnown RBP5.94□□□□□ -1.46
CSMD1-215ENST00000537824 IFNL3Q8IZI9 196 aa5.94□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms