RNA–Protein interactions for RNA: ENST00000537641.5

CPSF7-218, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 5

Gene CPSF7, Length 1,728 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-218ENST00000537641 SPDYAQ5MJ70 313 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 FAM83AQ86UY5 434 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 FAM160B2Q86V87 743 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 SLC47A2Q86VL8 602 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 ECHDC2Q86YB7 292 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 PPM1KQ8N3J5 372 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 KIF2BQ8N4N8 673 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 PLEKHO2Q8TD55 490 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 INPP5DQ92835 1189 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 TMEM237Q96Q45 408 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 CBWD1Q9BRT8 395 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 LRMDAQ9H2I8 198 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 SBDSQ9Y3A5 250 aaKnown RBP eCLIP12.93□□□□□ -0.34
CPSF7-218ENST00000537641 NEU2Q9Y3R4 380 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 CCDC189A1A4V9 331 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 FAM170AA1A519 330 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 FAM47DPA6NHR8 397 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 A8MUI8 341 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 NEBLO76041 1014 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 CFBP00751 764 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 GPC3P51654 580 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 YARSP54577 528 aaKnown RBP12.93□□□□□ -0.34
CPSF7-218ENST00000537641 GTF2BQ00403 316 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 ENPEPQ07075 957 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 MGAT5Q09328 741 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 SETDB1Q15047 1291 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 KRT39Q6A163 491 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 ENOSF1Q7L5Y1 443 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 ERICH1Q86X53 443 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 TDRPQ86YL5 185 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 TEX9Q8N6V9 391 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 CCDC89Q8N998 374 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 ANKLE1Q8NAG6 615 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 AGBL3Q8NEM8 1001 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 HELQQ8TDG4 1101 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 SH3TC2Q8TF17 1288 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 DDX1Q92499 740 aaKnown RBP12.93□□□□□ -0.34
CPSF7-218ENST00000537641 NT5C1BQ96P26 610 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 TMEM8AQ9HCN3 771 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 CHORDC1Q9UHD1 332 aaPredicted RBP12.93□□□□□ -0.34
CPSF7-218ENST00000537641 ANAPC7Q9UJX3 599 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 RPL26L1Q9UNX3 145 aaKnown RBP12.93□□□□□ -0.34
CPSF7-218ENST00000537641 NAALADL1Q9UQQ1 740 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 STK38LQ9Y2H1 464 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 MRPL11Q9Y3B7 192 aaKnown RBP12.93□□□□□ -0.34
CPSF7-218ENST00000537641 USH1CQ9Y6N9 552 aa12.93□□□□□ -0.34
CPSF7-218ENST00000537641 KIF3CO14782 793 aa12.92□□□□□ -0.34
CPSF7-218ENST00000537641 PRPF4O43172 522 aaKnown RBP eCLIP12.92□□□□□ -0.349e-7■■■■■ 34.9
CPSF7-218ENST00000537641 DCTN3O75935 186 aa12.92□□□□□ -0.34
CPSF7-218ENST00000537641 SMNDC1O75940 238 aaKnown RBP eCLIP12.92□□□□□ -0.34
CPSF7-218ENST00000537641 GH1P01241 217 aa12.92□□□□□ -0.34
CPSF7-218ENST00000537641 GTF2H1P32780 548 aa12.92□□□□□ -0.34
CPSF7-218ENST00000537641 ADCY8P40145 1251 aa12.92□□□□□ -0.34
CPSF7-218ENST00000537641 SNX1Q13596 522 aa12.92□□□□□ -0.34
CPSF7-218ENST00000537641 ANKRD20A2Q5SQ80 823 aa12.92□□□□□ -0.34
CPSF7-218ENST00000537641 ANKRD20A1Q5TYW2 823 aa12.92□□□□□ -0.34
CPSF7-218ENST00000537641 ANKRD20A3Q5VUR7 823 aa12.92□□□□□ -0.34
CPSF7-218ENST00000537641 NSMFQ6X4W1 530 aa12.92□□□□□ -0.34
CPSF7-218ENST00000537641 SRRM1Q8IYB3 904 aaKnown RBP12.92□□□□□ -0.34
CPSF7-218ENST00000537641 CYP4X1Q8N118 509 aa12.92□□□□□ -0.34
CPSF7-218ENST00000537641 CFAP61Q8NHU2 1237 aa12.92□□□□□ -0.34
CPSF7-218ENST00000537641 PITPNM3Q9BZ71 974 aa12.92□□□□□ -0.34
CPSF7-218ENST00000537641 PPCSQ9HAB8 311 aa12.92□□□□□ -0.34
CPSF7-218ENST00000537641 MLXIPLQ9NP71 852 aa12.92□□□□□ -0.34
CPSF7-218ENST00000537641 ZNF277Q9NRM2 450 aaPredicted RBP12.92□□□□□ -0.34
CPSF7-218ENST00000537641 SENP1Q9P0U3 644 aa12.92□□□□□ -0.34
CPSF7-218ENST00000537641 FEM1BQ9UK73 627 aa12.92□□□□□ -0.34
CPSF7-218ENST00000537641 EXOC7Q9UPT5 735 aa12.92□□□□□ -0.34
CPSF7-218ENST00000537641 PPP1R12AO14974 1030 aaPredicted RBP12.91□□□□□ -0.34
CPSF7-218ENST00000537641 PSTPIP1O43586 416 aa12.91□□□□□ -0.34
CPSF7-218ENST00000537641 LYPLA2O95372 231 aa12.91□□□□□ -0.34
CPSF7-218ENST00000537641 ASMTLO95671 621 aa12.91□□□□□ -0.34
CPSF7-218ENST00000537641 P4HBP07237 508 aaKnown RBP12.91□□□□□ -0.34
CPSF7-218ENST00000537641 ADRB2P07550 413 aa12.91□□□□□ -0.34
CPSF7-218ENST00000537641 ARP10275 920 aa12.91□□□□□ -0.34
CPSF7-218ENST00000537641 CETPP11597 493 aa12.91□□□□□ -0.34
CPSF7-218ENST00000537641 CAP2P40123 477 aa12.91□□□□□ -0.34
CPSF7-218ENST00000537641 NCKAP1LP55160 1127 aa12.91□□□□□ -0.34
CPSF7-218ENST00000537641 KLF1Q13351 362 aaPredicted RBP12.91□□□□□ -0.34
CPSF7-218ENST00000537641 BLMHQ13867 455 aa12.91□□□□□ -0.34
CPSF7-218ENST00000537641 CCNG2Q16589 344 aa12.91□□□□□ -0.34
CPSF7-218ENST00000537641 IZUMO3Q5VZ72 239 aa12.91□□□□□ -0.34
CPSF7-218ENST00000537641 CCDC174Q6PII3 467 aa12.91□□□□□ -0.34
CPSF7-218ENST00000537641 SLC30A10Q6XR72 485 aa12.91□□□□□ -0.34
CPSF7-218ENST00000537641 ZNF365Q70YC5 407 aa12.91□□□□□ -0.34
CPSF7-218ENST00000537641 MIER3Q7Z3K6 550 aa12.91□□□□□ -0.34
CPSF7-218ENST00000537641 ZNF677Q86XU0 584 aa12.91□□□□□ -0.34
CPSF7-218ENST00000537641 TMC2Q8TDI7 906 aa12.91□□□□□ -0.34
CPSF7-218ENST00000537641 MAML1Q92585 1016 aa12.91□□□□□ -0.34
CPSF7-218ENST00000537641 DDX27Q96GQ7 796 aaKnown RBP12.91□□□□□ -0.34
CPSF7-218ENST00000537641 CFAP57Q96MR6 1250 aa12.91□□□□□ -0.34
CPSF7-218ENST00000537641 TTC25Q96NG3 672 aa12.91□□□□□ -0.34
CPSF7-218ENST00000537641 ETNK1Q9HBU6 452 aa12.91□□□□□ -0.34
CPSF7-218ENST00000537641 ZNRF3Q9ULT6 936 aa12.91□□□□□ -0.34
CPSF7-218ENST00000537641 CORO1CQ9ULV4 474 aaPredicted RBP12.91□□□□□ -0.34
CPSF7-218ENST00000537641 SMG5Q9UPR3 1016 aaKnown RBP12.91□□□□□ -0.34
CPSF7-218ENST00000537641 ZBTB12Q9Y330 459 aaPredicted RBP12.91□□□□□ -0.34
CPSF7-218ENST00000537641 TISP43B9A030 160 aa12.91□□□□□ -0.34
CPSF7-218ENST00000537641 IPO5O00410 1097 aaKnown RBP12.91□□□□□ -0.34
CPSF7-218ENST00000537641 ABLIM1O14639 778 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms