RNA–Protein interactions for RNA: ENST00000537120.5

DDB1-208, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 2

Gene DDB1, Length 1,215 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-208ENST00000537120 TRAK2O60296 914 aa9.14□□□□□ -0.95
DDB1-208ENST00000537120 PDIA4P13667 645 aaKnown RBP9.14□□□□□ -0.95
DDB1-208ENST00000537120 KCNE1P15382 129 aa9.14□□□□□ -0.95
DDB1-208ENST00000537120 PLCG1P19174 1290 aa9.14□□□□□ -0.95
DDB1-208ENST00000537120 SCP2P22307 547 aa9.14□□□□□ -0.95
DDB1-208ENST00000537120 ABCD1P33897 745 aa9.14□□□□□ -0.95
DDB1-208ENST00000537120 DDIT3P35638 169 aa9.14□□□□□ -0.95
DDB1-208ENST00000537120 CLCN5P51795 746 aa9.14□□□□□ -0.95
DDB1-208ENST00000537120 NUBP1P53384 320 aa9.14□□□□□ -0.95
DDB1-208ENST00000537120 NTHL1P78549 312 aa9.14□□□□□ -0.95
DDB1-208ENST00000537120 PPP2R3AQ06190 1150 aa9.14□□□□□ -0.95
DDB1-208ENST00000537120 SPAG1Q07617 926 aa9.14□□□□□ -0.95
DDB1-208ENST00000537120 KARSQ15046 597 aaKnown RBP9.14□□□□□ -0.95
DDB1-208ENST00000537120 SLC10A6Q3KNW5 377 aa9.14□□□□□ -0.95
DDB1-208ENST00000537120 CTXN3Q4LDR2 81 aa9.14□□□□□ -0.95
DDB1-208ENST00000537120 VARS2Q5ST30 1063 aaKnown RBP9.14□□□□□ -0.95
DDB1-208ENST00000537120 RRAGBQ5VZM2 374 aa9.14□□□□□ -0.95
DDB1-208ENST00000537120 ALKAL1Q6UXT8 129 aa9.14□□□□□ -0.95
DDB1-208ENST00000537120 DSTYKQ6XUX3 929 aa9.14□□□□□ -0.95
DDB1-208ENST00000537120 USP37Q86T82 979 aa9.14□□□□□ -0.95
DDB1-208ENST00000537120 SIX5Q8N196 739 aa9.14□□□□□ -0.95
DDB1-208ENST00000537120 ELMOD1Q8N336 334 aa9.14□□□□□ -0.95
DDB1-208ENST00000537120 APPL2Q8NEU8 664 aa9.14□□□□□ -0.95
DDB1-208ENST00000537120 ST13P5Q8NFI4 369 aaPredicted RBP9.14□□□□□ -0.95
DDB1-208ENST00000537120 RAD54LQ92698 747 aa9.14□□□□□ -0.95
DDB1-208ENST00000537120 KIF12Q96FN5 646 aa9.14□□□□□ -0.95
DDB1-208ENST00000537120 SNX27Q96L92 541 aa9.14□□□□□ -0.95
DDB1-208ENST00000537120 ZMAT2Q96NC0 199 aaKnown RBP9.14□□□□□ -0.95
DDB1-208ENST00000537120 REEP2Q9BRK0 252 aa9.14□□□□□ -0.95
DDB1-208ENST00000537120 RPF1Q9H9Y2 349 aaKnown RBP9.14□□□□□ -0.95
DDB1-208ENST00000537120 PLEKHA5Q9HAU0 1116 aa9.14□□□□□ -0.95
DDB1-208ENST00000537120 CYP4F11Q9HBI6 524 aa9.14□□□□□ -0.95
DDB1-208ENST00000537120 EPS15L1Q9UBC2 864 aa9.14□□□□□ -0.95
DDB1-208ENST00000537120 MTRRQ9UBK8 725 aa9.14□□□□□ -0.95
DDB1-208ENST00000537120 FBXW11Q9UKB1 542 aa9.14□□□□□ -0.95
DDB1-208ENST00000537120 CA14Q9ULX7 337 aa9.14□□□□□ -0.95
DDB1-208ENST00000537120 TBX20Q9UMR3 447 aa9.14□□□□□ -0.95
DDB1-208ENST00000537120 MRPS23Q9Y3D9 190 aaKnown RBP9.14□□□□□ -0.95
DDB1-208ENST00000537120 ZFP37Q9Y6Q3 630 aaPredicted RBP9.14□□□□□ -0.95
DDB1-208ENST00000537120 PLXNA3P51805 1871 aa9.14□□□□□ -0.95
DDB1-208ENST00000537120 SYN3O14994 580 aa9.13□□□□□ -0.95
DDB1-208ENST00000537120 GALR2O43603 387 aaPredicted RBP9.13□□□□□ -0.95
DDB1-208ENST00000537120 NARSO43776 548 aaKnown RBP9.13□□□□□ -0.95
DDB1-208ENST00000537120 HSP90AA1P07900 732 aaKnown RBP9.13□□□□□ -0.95
DDB1-208ENST00000537120 PTPN2P17706 415 aa9.13□□□□□ -0.95
DDB1-208ENST00000537120 PROZP22891 400 aa9.13□□□□□ -0.95
DDB1-208ENST00000537120 IGFBP6P24592 240 aaPredicted RBP9.13□□□□□ -0.95
DDB1-208ENST00000537120 SOX4Q06945 474 aaPredicted RBP9.13□□□□□ -0.95
DDB1-208ENST00000537120 MCL1Q07820 350 aa9.13□□□□□ -0.95
DDB1-208ENST00000537120 CUL4AQ13619 759 aa9.13□□□□□ -0.95
DDB1-208ENST00000537120 PABPC1LQ4VXU2 614 aaKnown RBP9.13□□□□□ -0.95
DDB1-208ENST00000537120 XKR4Q5GH76 650 aa9.13□□□□□ -0.95
DDB1-208ENST00000537120 SPECC1Q5M775 1068 aa9.13□□□□□ -0.95
DDB1-208ENST00000537120 IQCEQ6IPM2 695 aa9.13□□□□□ -0.95
DDB1-208ENST00000537120 SV2BQ7L1I2 683 aa9.13□□□□□ -0.95
DDB1-208ENST00000537120 RTL10Q7L3V2 364 aa9.13□□□□□ -0.95
DDB1-208ENST00000537120 DYMQ7RTS9 669 aa9.13□□□□□ -0.95
DDB1-208ENST00000537120 ZNF461Q8TAF7 563 aa9.13□□□□□ -0.95
DDB1-208ENST00000537120 LARP4BQ92615 738 aaKnown RBP9.13□□□□□ -0.95
DDB1-208ENST00000537120 ZNF512Q96ME7 567 aaPredicted RBP9.13□□□□□ -0.95
DDB1-208ENST00000537120 RTP3Q9BQQ7 232 aa9.13□□□□□ -0.95
DDB1-208ENST00000537120 MSTO1Q9BUK6 570 aa9.13□□□□□ -0.95
DDB1-208ENST00000537120 PANK2Q9BZ23 570 aa9.13□□□□□ -0.95
DDB1-208ENST00000537120 FAM86C1Q9NVL1 165 aa9.13□□□□□ -0.95
DDB1-208ENST00000537120 CNTN3Q9P232 1028 aa9.13□□□□□ -0.95
DDB1-208ENST00000537120 WNT16Q9UBV4 365 aa9.13□□□□□ -0.95
DDB1-208ENST00000537120 CDH7Q9ULB5 785 aa9.13□□□□□ -0.95
DDB1-208ENST00000537120 UBQLN1Q9UMX0 589 aaKnown RBP9.13□□□□□ -0.95
DDB1-208ENST00000537120 DUSP12Q9UNI6 340 aa9.13□□□□□ -0.95
DDB1-208ENST00000537120 GTF3C5Q9Y5Q8 519 aaPredicted RBP9.13□□□□□ -0.95
DDB1-208ENST00000537120 CLIC4Q9Y696 253 aa9.13□□□□□ -0.95
DDB1-208ENST00000537120 ZNF318Q5VUA4 2279 aa9.13□□□□□ -0.95
DDB1-208ENST00000537120 CITO14578 2027 aa9.12□□□□□ -0.95
DDB1-208ENST00000537120 C2orf16Q68DN1 1984 aa9.12□□□□□ -0.95
DDB1-208ENST00000537120 LACTBL1A8MY62 500 aa9.12□□□□□ -0.95
DDB1-208ENST00000537120 OGTO15294 1046 aa9.12□□□□□ -0.95
DDB1-208ENST00000537120 N4BP1O75113 896 aaKnown RBP9.12□□□□□ -0.95
DDB1-208ENST00000537120 CXCL8P10145 99 aa9.12□□□□□ -0.95
DDB1-208ENST00000537120 SRFP11831 508 aa9.12□□□□□ -0.95
DDB1-208ENST00000537120 CPB1P15086 417 aa9.12□□□□□ -0.95
DDB1-208ENST00000537120 SYT1P21579 422 aa9.12□□□□□ -0.95
DDB1-208ENST00000537120 HOXA9P31269 272 aa9.12□□□□□ -0.95
DDB1-208ENST00000537120 NCKAP1LP55160 1127 aa9.12□□□□□ -0.95
DDB1-208ENST00000537120 GRIN1Q05586 938 aa9.12□□□□□ -0.95
DDB1-208ENST00000537120 CYP4A22Q5TCH4 519 aa9.12□□□□□ -0.95
DDB1-208ENST00000537120 ADALQ6DHV7 355 aa9.12□□□□□ -0.95
DDB1-208ENST00000537120 SLFN12LQ6IEE8 588 aa9.12□□□□□ -0.95
DDB1-208ENST00000537120 ZNF280DQ6N043 979 aa9.12□□□□□ -0.95
DDB1-208ENST00000537120 CD300LGQ6UXG3 332 aa9.12□□□□□ -0.95
DDB1-208ENST00000537120 RSPO2Q6UXX9 243 aaPredicted RBP9.12□□□□□ -0.95
DDB1-208ENST00000537120 MTSS1LQ765P7 747 aa9.12□□□□□ -0.95
DDB1-208ENST00000537120 CD302Q8IX05 232 aa9.12□□□□□ -0.95
DDB1-208ENST00000537120 TMEM105Q8N8V8 129 aa9.12□□□□□ -0.95
DDB1-208ENST00000537120 C3orf58Q8NDZ4 430 aa9.12□□□□□ -0.95
DDB1-208ENST00000537120 BEST2Q8NFU1 509 aa9.12□□□□□ -0.95
DDB1-208ENST00000537120 ING5Q8WYH8 240 aa9.12□□□□□ -0.95
DDB1-208ENST00000537120 FGF13Q92913 245 aa9.12□□□□□ -0.95
DDB1-208ENST00000537120 MCRS1Q96EZ8 462 aa9.12□□□□□ -0.95
DDB1-208ENST00000537120 SHDQ96IW2 340 aa9.12□□□□□ -0.95
DDB1-208ENST00000537120 EPSTI1Q96J88 318 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms