RNA–Protein interactions for RNA: ENST00000535915.5

LDLR-203, Transcript of low density lipoprotein receptor, humanhuman

TSL 2 BASIC

Gene LDLR, Length 2,768 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLR-203ENST00000535915 SIP14410 1827 aa14.04□□□□□ -0.16
LDLR-203ENST00000535915 LRRIQ4A6NIV6 560 aa14.04□□□□□ -0.16
LDLR-203ENST00000535915 RIPK2O43353 540 aa14.04□□□□□ -0.16
LDLR-203ENST00000535915 C4BPAP04003 597 aaKnown RBP14.04□□□□□ -0.16
LDLR-203ENST00000535915 MYBL1P10243 752 aa14.04□□□□□ -0.16
LDLR-203ENST00000535915 CLDN10P78369 228 aa14.04□□□□□ -0.16
LDLR-203ENST00000535915 SP2Q02086 613 aa14.04□□□□□ -0.16
LDLR-203ENST00000535915 C6orf118Q5T5N4 469 aa14.04□□□□□ -0.16
LDLR-203ENST00000535915 EPS8L3Q8TE67 593 aaKnown RBP14.04□□□□□ -0.16
LDLR-203ENST00000535915 DDX20Q9UHI6 824 aaKnown RBP14.04□□□□□ -0.16
LDLR-203ENST00000535915 GGA2Q9UJY4 613 aa14.04□□□□□ -0.16
LDLR-203ENST00000535915 SBDSQ9Y3A5 250 aaKnown RBP eCLIP14.04□□□□□ -0.16
LDLR-203ENST00000535915 PTPRJQ12913 1337 aa14.03□□□□□ -0.16
LDLR-203ENST00000535915 NFKBIEO00221 500 aa14.03□□□□□ -0.16
LDLR-203ENST00000535915 STAM2O75886 525 aa14.03□□□□□ -0.16
LDLR-203ENST00000535915 SLCO1A2P46721 670 aa14.03□□□□□ -0.16
LDLR-203ENST00000535915 CPLX4Q7Z7G2 160 aa14.03□□□□□ -0.16
LDLR-203ENST00000535915 DEPTORQ8TB45 409 aa14.03□□□□□ -0.16
LDLR-203ENST00000535915 ATG4AQ8WYN0 398 aa14.03□□□□□ -0.16
LDLR-203ENST00000535915 ZBTB45Q96K62 511 aaPredicted RBP14.03□□□□□ -0.16
LDLR-203ENST00000535915 ASIC3Q9UHC3 531 aa14.03□□□□□ -0.16
LDLR-203ENST00000535915 KCNG1Q9UIX4 513 aa14.03□□□□□ -0.16
LDLR-203ENST00000535915 ZNF112Q9UJU3 913 aa14.03□□□□□ -0.16
LDLR-203ENST00000535915 CAPN7Q9Y6W3 813 aa14.03□□□□□ -0.16
LDLR-203ENST00000535915 K7ERI5 159 aa14.03□□□□□ -0.16
LDLR-203ENST00000535915 CHN1P15882 459 aa14.03□□□□□ -0.16
LDLR-203ENST00000535915 SLC1A1P43005 524 aa14.03□□□□□ -0.16
LDLR-203ENST00000535915 TGFB2P61812 414 aa14.03□□□□□ -0.16
LDLR-203ENST00000535915 IFI35P80217 286 aaPredicted RBP14.03□□□□□ -0.16
LDLR-203ENST00000535915 CENPCQ03188 943 aa14.03□□□□□ -0.16
LDLR-203ENST00000535915 DAB2IPQ5VWQ8 1189 aa14.03□□□□□ -0.16
LDLR-203ENST00000535915 CCDC91Q7Z6B0 441 aa14.03□□□□□ -0.16
LDLR-203ENST00000535915 CROCCP2Q86T23 111 aa14.03□□□□□ -0.16
LDLR-203ENST00000535915 PASD1Q8IV76 773 aa14.03□□□□□ -0.16
LDLR-203ENST00000535915 C12orf42Q96LP6 360 aa14.03□□□□□ -0.16
LDLR-203ENST00000535915 ZNF302Q9NR11 478 aa14.03□□□□□ -0.16
LDLR-203ENST00000535915 CHST7Q9NS84 486 aa14.03□□□□□ -0.16
LDLR-203ENST00000535915 RBAKQ9NYW8 714 aaPredicted RBP14.03□□□□□ -0.16
LDLR-203ENST00000535915 ANKFY1Q9P2R3 1169 aa14.03□□□□□ -0.16
LDLR-203ENST00000535915 BRCA1P38398 1863 aaKnown RBP14.03□□□□□ -0.16
LDLR-203ENST00000535915 C19orf81C9J6K1 198 aa14.02□□□□□ -0.16
LDLR-203ENST00000535915 ATP4AP20648 1035 aa14.02□□□□□ -0.16
LDLR-203ENST00000535915 SSTR3P32745 418 aaPredicted RBP14.02□□□□□ -0.16
LDLR-203ENST00000535915 ERMARDQ5T6L9 678 aa14.02□□□□□ -0.16
LDLR-203ENST00000535915 TMEM270Q6UE05 265 aa14.02□□□□□ -0.16
LDLR-203ENST00000535915 CATSPERGQ6ZRH7 1159 aa14.02□□□□□ -0.16
LDLR-203ENST00000535915 DEFB132Q7Z7B7 95 aa14.02□□□□□ -0.16
LDLR-203ENST00000535915 CCDC50Q8IVM0 306 aa14.02□□□□□ -0.16
LDLR-203ENST00000535915 ASAP3Q8TDY4 903 aa14.02□□□□□ -0.16
LDLR-203ENST00000535915 ZNF526Q8TF50 670 aaPredicted RBP14.02□□□□□ -0.16
LDLR-203ENST00000535915 SLC16A10Q8TF71 515 aa14.02□□□□□ -0.16
LDLR-203ENST00000535915 MAIP1Q8WWC4 291 aa14.02□□□□□ -0.16
LDLR-203ENST00000535915 SLCO2A1Q92959 643 aa14.02□□□□□ -0.16
LDLR-203ENST00000535915 CABS1Q96KC9 395 aa14.02□□□□□ -0.16
LDLR-203ENST00000535915 XPO6Q96QU8 1125 aaKnown RBP14.02□□□□□ -0.16
LDLR-203ENST00000535915 C11orf70Q9BRQ4 267 aa14.02□□□□□ -0.16
LDLR-203ENST00000535915 FAM129AQ9BZQ8 928 aa14.02□□□□□ -0.16
LDLR-203ENST00000535915 HAPLN2Q9GZV7 340 aa14.02□□□□□ -0.16
LDLR-203ENST00000535915 PCDHB4Q9Y5E5 795 aa14.02□□□□□ -0.16
LDLR-203ENST00000535915 H0YHG0 523 aa14.02□□□□□ -0.17
LDLR-203ENST00000535915 RASGRF2O14827 1237 aa14.02□□□□□ -0.17
LDLR-203ENST00000535915 VNN1O95497 513 aa14.02□□□□□ -0.17
LDLR-203ENST00000535915 AGTP01019 485 aa14.02□□□□□ -0.17
LDLR-203ENST00000535915 OATP04181 439 aa14.02□□□□□ -0.17
LDLR-203ENST00000535915 CYP1A1P04798 512 aaPredicted RBP14.02□□□□□ -0.17
LDLR-203ENST00000535915 MMP13P45452 471 aa14.02□□□□□ -0.17
LDLR-203ENST00000535915 CUL2Q13617 745 aa14.02□□□□□ -0.17
LDLR-203ENST00000535915 STXBP2Q15833 593 aa14.02□□□□□ -0.17
LDLR-203ENST00000535915 C6orf89Q6UWU4 347 aa14.02□□□□□ -0.17
LDLR-203ENST00000535915 CRELD2Q6UXH1 353 aaPredicted RBP14.02□□□□□ -0.17
LDLR-203ENST00000535915 KAT2BQ92831 832 aa14.02□□□□□ -0.17
LDLR-203ENST00000535915 CENPTQ96BT3 561 aa14.02□□□□□ -0.17
LDLR-203ENST00000535915 SEC16BQ96JE7 1060 aa14.02□□□□□ -0.17
LDLR-203ENST00000535915 MSTO1Q9BUK6 570 aa14.02□□□□□ -0.17
LDLR-203ENST00000535915 PORCNQ9H237 461 aa14.02□□□□□ -0.17
LDLR-203ENST00000535915 WHRNQ9P202 907 aa14.02□□□□□ -0.17
LDLR-203ENST00000535915 STYXL1Q9Y6J8 313 aa14.02□□□□□ -0.17
LDLR-203ENST00000535915 CFHP08603 1231 aa14.01□□□□□ -0.17
LDLR-203ENST00000535915 GLRA2P23416 452 aa14.01□□□□□ -0.17
LDLR-203ENST00000535915 GNA15P30679 374 aa14.01□□□□□ -0.17
LDLR-203ENST00000535915 NAMPTP43490 491 aa14.01□□□□□ -0.17
LDLR-203ENST00000535915 LIN9Q5TKA1 542 aa14.01□□□□□ -0.17
LDLR-203ENST00000535915 SLFN12LQ6IEE8 588 aa14.01□□□□□ -0.17
LDLR-203ENST00000535915 MON1BQ7L1V2 547 aa14.01□□□□□ -0.17
LDLR-203ENST00000535915 ARMC9Q7Z3E5 817 aa14.01□□□□□ -0.17
LDLR-203ENST00000535915 SLC7A3Q8WY07 619 aa14.01□□□□□ -0.17
LDLR-203ENST00000535915 CCDC114Q96M63 670 aa14.01□□□□□ -0.17
LDLR-203ENST00000535915 TARS2Q9BW92 718 aaKnown RBP14.01□□□□□ -0.17
LDLR-203ENST00000535915 CCDC113Q9H0I3 377 aa14.01□□□□□ -0.17
LDLR-203ENST00000535915 PPP1R1BQ9UD71 204 aaPredicted RBP14.01□□□□□ -0.17
LDLR-203ENST00000535915 MAFBQ9Y5Q3 323 aaPredicted RBP14.01□□□□□ -0.17
LDLR-203ENST00000535915 ATP2A1O14983 1001 aa14.01□□□□□ -0.17
LDLR-203ENST00000535915 MYCNP04198 464 aaPredicted RBP14.01□□□□□ -0.17
LDLR-203ENST00000535915 POTEJP0CG39 1038 aa14.01□□□□□ -0.17
LDLR-203ENST00000535915 ACO1P21399 889 aaKnown RBP14.01□□□□□ -0.17
LDLR-203ENST00000535915 TRIP13Q15645 432 aaPredicted RBP14.01□□□□□ -0.17
LDLR-203ENST00000535915 ZBTB41Q5SVQ8 909 aa14.01□□□□□ -0.17
LDLR-203ENST00000535915 ANGEL2Q5VTE6 544 aaKnown RBP14.01□□□□□ -0.17
LDLR-203ENST00000535915 SEPT14Q6ZU15 432 aa14.01□□□□□ -0.17
LDLR-203ENST00000535915 CACNA2D3Q8IZS8 1091 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms