RNA–Protein interactions for RNA: ENST00000535789.1

ATL3-202, Transcript of atlastin GTPase 3, humanhuman

TSL 4

Gene ATL3, Length 828 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-202ENST00000535789 CPSF3Q9UKF6 684 aaKnown RBP17.87■□□□□ 0.45
ATL3-202ENST00000535789 SSX2IPQ9Y2D8 614 aa17.87■□□□□ 0.45
ATL3-202ENST00000535789 STYXL1Q9Y6J8 313 aa17.87■□□□□ 0.45
ATL3-202ENST00000535789 LACTBL1A8MY62 500 aa17.86■□□□□ 0.45
ATL3-202ENST00000535789 C2CD4DB7Z1M9 353 aa17.86■□□□□ 0.45
ATL3-202ENST00000535789 CLTAP09496 248 aa17.86■□□□□ 0.45
ATL3-202ENST00000535789 SCP2P22307 547 aa17.86■□□□□ 0.45
ATL3-202ENST00000535789 CASP1P29466 404 aa17.86■□□□□ 0.45
ATL3-202ENST00000535789 MATR3P43243 847 aaKnown RBP eCLIP17.86■□□□□ 0.45
ATL3-202ENST00000535789 RESP18Q5W5W9 173 aa17.86■□□□□ 0.45
ATL3-202ENST00000535789 DCLRE1AQ6PJP8 1040 aa17.86■□□□□ 0.45
ATL3-202ENST00000535789 CRELD2Q6UXH1 353 aaPredicted RBP17.86■□□□□ 0.45
ATL3-202ENST00000535789 GPR149Q86SP6 731 aa17.86■□□□□ 0.45
ATL3-202ENST00000535789 CEP57Q86XR8 500 aa17.86■□□□□ 0.45
ATL3-202ENST00000535789 MSTO1Q9BUK6 570 aa17.86■□□□□ 0.45
ATL3-202ENST00000535789 TRIM9Q9C026 710 aa17.86■□□□□ 0.45
ATL3-202ENST00000535789 TNMDQ9H2S6 317 aa17.86■□□□□ 0.45
ATL3-202ENST00000535789 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP17.86■□□□□ 0.45
ATL3-202ENST00000535789 SLC38A7Q9NVC3 462 aa17.86■□□□□ 0.45
ATL3-202ENST00000535789 SEL1LQ9UBV2 794 aa17.86■□□□□ 0.45
ATL3-202ENST00000535789 FBXW11Q9UKB1 542 aa17.86■□□□□ 0.45
ATL3-202ENST00000535789 RCOR1Q9UKL0 485 aa17.86■□□□□ 0.45
ATL3-202ENST00000535789 PPEF2O14830 753 aa17.85■□□□□ 0.45
ATL3-202ENST00000535789 DCXO43602 365 aa17.85■□□□□ 0.45
ATL3-202ENST00000535789 IDEP14735 1019 aa17.85■□□□□ 0.45
ATL3-202ENST00000535789 GAP43P17677 238 aa17.85■□□□□ 0.45
ATL3-202ENST00000535789 HERC4Q5GLZ8 1057 aaPredicted RBP17.85■□□□□ 0.45
ATL3-202ENST00000535789 L1TD1Q5T7N2 865 aaKnown RBP17.85■□□□□ 0.45
ATL3-202ENST00000535789 TMEM87AQ8NBN3 555 aa17.85■□□□□ 0.45
ATL3-202ENST00000535789 KCNG4Q8TDN1 519 aa17.85■□□□□ 0.45
ATL3-202ENST00000535789 HVCN1Q96D96 273 aa17.85■□□□□ 0.45
ATL3-202ENST00000535789 MRPL44Q9H9J2 332 aaKnown RBP17.85■□□□□ 0.45
ATL3-202ENST00000535789 PANK4Q9NVE7 773 aa17.85■□□□□ 0.45
ATL3-202ENST00000535789 MTRRQ9UBK8 725 aa17.85■□□□□ 0.45
ATL3-202ENST00000535789 RAPGEFL1Q9UHV5 662 aa17.85■□□□□ 0.45
ATL3-202ENST00000535789 OBSL1O75147 1896 aa17.84■□□□□ 0.45
ATL3-202ENST00000535789 N4BP1O75113 896 aaKnown RBP17.84■□□□□ 0.45
ATL3-202ENST00000535789 NFICP08651 508 aa17.84■□□□□ 0.45
ATL3-202ENST00000535789 MTHFRP42898 656 aa17.84■□□□□ 0.45
ATL3-202ENST00000535789 ACOT2P49753 483 aa17.84■□□□□ 0.45
ATL3-202ENST00000535789 PPP2R3AQ06190 1150 aa17.84■□□□□ 0.45
ATL3-202ENST00000535789 EHHADHQ08426 723 aa17.84■□□□□ 0.45
ATL3-202ENST00000535789 ELAVL2Q12926 359 aaKnown RBP17.84■□□□□ 0.45
ATL3-202ENST00000535789 CES5AQ6NT32 575 aa17.84■□□□□ 0.45
ATL3-202ENST00000535789 CMASQ8NFW8 434 aaPredicted RBP17.84■□□□□ 0.45
ATL3-202ENST00000535789 NECTIN4Q96NY8 510 aa17.84■□□□□ 0.45
ATL3-202ENST00000535789 LRFN3Q9BTN0 628 aa17.84■□□□□ 0.45
ATL3-202ENST00000535789 PLEKHA5Q9HAU0 1116 aa17.84■□□□□ 0.45
ATL3-202ENST00000535789 DENND4CQ5VZ89 1909 aa17.84■□□□□ 0.45
ATL3-202ENST00000535789 POLR2DO15514 142 aaKnown RBP17.83■□□□□ 0.44
ATL3-202ENST00000535789 GCNT3O95395 438 aa17.83■□□□□ 0.44
ATL3-202ENST00000535789 LRPAP1P30533 357 aa17.83■□□□□ 0.44
ATL3-202ENST00000535789 HOXD13P35453 343 aa17.83■□□□□ 0.44
ATL3-202ENST00000535789 ME1P48163 572 aa17.83■□□□□ 0.44
ATL3-202ENST00000535789 ATL3Q6DD88 541 aa17.83■□□□□ 0.44
ATL3-202ENST00000535789 JADE1Q6IE81 842 aa17.83■□□□□ 0.44
ATL3-202ENST00000535789 GRAMD1CQ8IYS0 662 aa17.83■□□□□ 0.44
ATL3-202ENST00000535789 LEO1Q8WVC0 666 aaPredicted RBP17.83■□□□□ 0.44
ATL3-202ENST00000535789 KIF12Q96FN5 646 aa17.83■□□□□ 0.44
ATL3-202ENST00000535789 FAM84AQ96KN4 292 aa17.83■□□□□ 0.44
ATL3-202ENST00000535789 CCDC195A0A1B0GUA6 201 aa17.82■□□□□ 0.44
ATL3-202ENST00000535789 TBC1D4O60343 1298 aa17.82■□□□□ 0.44
ATL3-202ENST00000535789 PRPF6O94906 941 aaKnown RBP17.82■□□□□ 0.44
ATL3-202ENST00000535789 RPL9P32969 192 aaKnown RBP17.82■□□□□ 0.44
ATL3-202ENST00000535789 AARSP49588 968 aaKnown RBP eCLIP17.82■□□□□ 0.44
ATL3-202ENST00000535789 VARS2Q5ST30 1063 aaKnown RBP17.82■□□□□ 0.44
ATL3-202ENST00000535789 SCARA3Q6AZY7 606 aa17.82■□□□□ 0.44
ATL3-202ENST00000535789 ADALQ6DHV7 355 aa17.82■□□□□ 0.44
ATL3-202ENST00000535789 CNNM4Q6P4Q7 775 aa17.82■□□□□ 0.44
ATL3-202ENST00000535789 C15orf39Q6ZRI6 1047 aa17.82■□□□□ 0.44
ATL3-202ENST00000535789 EFCAB13Q8IY85 973 aa17.82■□□□□ 0.44
ATL3-202ENST00000535789 KREMEN2Q8NCW0 462 aa17.82■□□□□ 0.44
ATL3-202ENST00000535789 SUSD3Q96L08 255 aa17.82■□□□□ 0.44
ATL3-202ENST00000535789 RIPOR3Q96MK2 946 aa17.82■□□□□ 0.44
ATL3-202ENST00000535789 C1QTNF1Q9BXJ1 281 aa17.82■□□□□ 0.44
ATL3-202ENST00000535789 SMOC2Q9H3U7 446 aa17.82■□□□□ 0.44
ATL3-202ENST00000535789 CUEDC2Q9H467 287 aa17.82■□□□□ 0.44
ATL3-202ENST00000535789 RPF1Q9H9Y2 349 aaKnown RBP17.82■□□□□ 0.44
ATL3-202ENST00000535789 AGO2Q9UKV8 859 aaKnown RBP17.82■□□□□ 0.44
ATL3-202ENST00000535789 UBQLN1Q9UMX0 589 aaKnown RBP17.82■□□□□ 0.44
ATL3-202ENST00000535789 CDY1Q9Y6F8 540 aa17.82■□□□□ 0.44
ATL3-202ENST00000535789 PTPRDP23468 1912 aa17.82■□□□□ 0.44
ATL3-202ENST00000535789 ACTN4O43707 911 aaKnown RBP17.81■□□□□ 0.44
ATL3-202ENST00000535789 GPR37L1O60883 481 aa17.81■□□□□ 0.44
ATL3-202ENST00000535789 C1RP00736 705 aa17.81■□□□□ 0.44
ATL3-202ENST00000535789 CYP3A5P20815 502 aa17.81■□□□□ 0.44
ATL3-202ENST00000535789 ABCD1P33897 745 aa17.81■□□□□ 0.44
ATL3-202ENST00000535789 OR1D2P34982 312 aa17.81■□□□□ 0.44
ATL3-202ENST00000535789 CREMQ03060 361 aa17.81■□□□□ 0.44
ATL3-202ENST00000535789 MRPL58Q14197 206 aaKnown RBP17.81■□□□□ 0.44
ATL3-202ENST00000535789 EPM2AIP1Q7L775 607 aaPredicted RBP17.81■□□□□ 0.44
ATL3-202ENST00000535789 HDAC7Q8WUI4 952 aa17.81■□□□□ 0.44
ATL3-202ENST00000535789 SAAL1Q96ER3 474 aa17.81■□□□□ 0.44
ATL3-202ENST00000535789 C7orf25Q9BPX7 421 aa17.81■□□□□ 0.44
ATL3-202ENST00000535789 CBWD1Q9BRT8 395 aa17.81■□□□□ 0.44
ATL3-202ENST00000535789 RHOBTB2Q9BYZ6 727 aa17.81■□□□□ 0.44
ATL3-202ENST00000535789 BLZF1Q9H2G9 400 aa17.81■□□□□ 0.44
ATL3-202ENST00000535789 BACE2Q9Y5Z0 518 aa17.81■□□□□ 0.44
ATL3-202ENST00000535789 WDR27A2RRH5 827 aa17.8■□□□□ 0.44
ATL3-202ENST00000535789 SPTLC1O15269 473 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms