RNA–Protein interactions for RNA: ENST00000534442.5

ECHDC1-223, Transcript of ethylmalonyl-CoA decarboxylase 1, human

TSL 5

Gene ECHDC1, Length 577 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC1-223	ENST00000534442	RXFP1	Q9HBX9	757 aa		5.67	□□□□□ -1.5
ECHDC1-223	ENST00000534442	MYOT	Q9UBF9	498 aa		5.67	□□□□□ -1.5
ECHDC1-223	ENST00000534442	IP6K2	Q9UHH9	426 aa		5.67	□□□□□ -1.5
ECHDC1-223	ENST00000534442	PALD1	Q9ULE6	856 aa		5.67	□□□□□ -1.5
ECHDC1-223	ENST00000534442	FAM50B	Q9Y247	325 aa		5.67	□□□□□ -1.5
ECHDC1-223	ENST00000534442	NOC2L	Q9Y3T9	749 aa	Known RBP	5.67	□□□□□ -1.5
ECHDC1-223	ENST00000534442	PCDHGA9	Q9Y5G4	932 aa	Known RBP	5.67	□□□□□ -1.5
ECHDC1-223	ENST00000534442	PCDHGA8	Q9Y5G5	932 aa		5.67	□□□□□ -1.5
ECHDC1-223	ENST00000534442	PCDHGA7	Q9Y5G6	932 aa		5.67	□□□□□ -1.5
ECHDC1-223	ENST00000534442	PCDHGA6	Q9Y5G7	932 aa		5.67	□□□□□ -1.5
ECHDC1-223	ENST00000534442	PCDHGA3	Q9Y5H0	932 aa		5.67	□□□□□ -1.5
ECHDC1-223	ENST00000534442	PCDHGA2	Q9Y5H1	932 aa		5.67	□□□□□ -1.5
ECHDC1-223	ENST00000534442	ZNF521	Q96K83	1311 aa		5.67	□□□□□ -1.5
ECHDC1-223	ENST00000534442	DOCK3	Q8IZD9	2030 aa		5.67	□□□□□ -1.5
ECHDC1-223	ENST00000534442	CELSR3	Q9NYQ7	3312 aa		5.66	□□□□□ -1.5
ECHDC1-223	ENST00000534442	AK9	Q5TCS8	1911 aa		5.66	□□□□□ -1.5
ECHDC1-223	ENST00000534442	GOLGA8A	A7E2F4	631 aa		5.66	□□□□□ -1.5
ECHDC1-223	ENST00000534442	GOLGA8B	A8MQT2	603 aa		5.66	□□□□□ -1.5
ECHDC1-223	ENST00000534442	ACOT7	O00154	380 aa		5.66	□□□□□ -1.5
ECHDC1-223	ENST00000534442	DNM1L	O00429	736 aa		5.66	□□□□□ -1.5
ECHDC1-223	ENST00000534442	KIAA0355	O15063	1070 aa		5.66	□□□□□ -1.5
ECHDC1-223	ENST00000534442	MAFK	O60675	156 aa		5.66	□□□□□ -1.5
ECHDC1-223	ENST00000534442	H2AFY	O75367	372 aa	Known RBP	5.66	□□□□□ -1.5
ECHDC1-223	ENST00000534442	RFPL1	O75677	317 aa		5.66	□□□□□ -1.5
ECHDC1-223	ENST00000534442	CYP17A1	P05093	508 aa		5.66	□□□□□ -1.5
ECHDC1-223	ENST00000534442	DBH	P09172	617 aa		5.66	□□□□□ -1.5
ECHDC1-223	ENST00000534442	CLTB	P09497	229 aa		5.66	□□□□□ -1.5
ECHDC1-223	ENST00000534442	TMEM253	P0C7T8	217 aa		5.66	□□□□□ -1.5
ECHDC1-223	ENST00000534442	SLC5A1	P13866	664 aa		5.66	□□□□□ -1.5
ECHDC1-223	ENST00000534442	PNLIP	P16233	465 aa		5.66	□□□□□ -1.5
ECHDC1-223	ENST00000534442	SDHA	P31040	664 aa		5.66	□□□□□ -1.5
ECHDC1-223	ENST00000534442	TNNT2	P45379	298 aa	Predicted RBP	5.66	□□□□□ -1.5
ECHDC1-223	ENST00000534442	TLE2	Q04725	743 aa		5.66	□□□□□ -1.5
ECHDC1-223	ENST00000534442	ODF1	Q14990	250 aa		5.66	□□□□□ -1.5
ECHDC1-223	ENST00000534442	SNX17	Q15036	470 aa		5.66	□□□□□ -1.5
ECHDC1-223	ENST00000534442	FAM102B	Q5T8I3	360 aa		5.66	□□□□□ -1.5
ECHDC1-223	ENST00000534442	BTBD8	Q5XKL5	378 aa		5.66	□□□□□ -1.5
ECHDC1-223	ENST00000534442	ZNF530	Q6P9A1	599 aa	Predicted RBP	5.66	□□□□□ -1.5
ECHDC1-223	ENST00000534442	PGM2L1	Q6PCE3	622 aa		5.66	□□□□□ -1.5
ECHDC1-223	ENST00000534442	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	5.66	□□□□□ -1.5
ECHDC1-223	ENST00000534442	DCP2	Q8IU60	420 aa	Known RBP	5.66	□□□□□ -1.5
ECHDC1-223	ENST00000534442	NETO2	Q8NC67	525 aa		5.66	□□□□□ -1.5
ECHDC1-223	ENST00000534442	TTC8	Q8TAM2	541 aa		5.66	□□□□□ -1.5
ECHDC1-223	ENST00000534442	PHOSPHO1	Q8TCT1	267 aa		5.66	□□□□□ -1.5
ECHDC1-223	ENST00000534442	NEK9	Q8TD19	979 aa		5.66	□□□□□ -1.5
ECHDC1-223	ENST00000534442	RELT	Q969Z4	430 aa		5.66	□□□□□ -1.5
ECHDC1-223	ENST00000534442	PARK7	Q99497	189 aa	Known RBP	5.66	□□□□□ -1.5
ECHDC1-223	ENST00000534442	SEMA4A	Q9H3S1	761 aa		5.66	□□□□□ -1.5
ECHDC1-223	ENST00000534442	TCF7L1	Q9HCS4	588 aa		5.66	□□□□□ -1.5
ECHDC1-223	ENST00000534442	TNFRSF12A	Q9NP84	129 aa		5.66	□□□□□ -1.5
ECHDC1-223	ENST00000534442	GPR160	Q9UJ42	338 aa		5.66	□□□□□ -1.5
ECHDC1-223	ENST00000534442	NOB1	Q9ULX3	412 aa	Known RBP	5.66	□□□□□ -1.5
ECHDC1-223	ENST00000534442	LUC7L2	Q9Y383	392 aa	Known RBP	5.66	□□□□□ -1.5
ECHDC1-223	ENST00000534442	PCDHB4	Q9Y5E5	795 aa		5.66	□□□□□ -1.5
ECHDC1-223	ENST00000534442	RAI2	Q9Y5P3	530 aa		5.66	□□□□□ -1.5
ECHDC1-223	ENST00000534442	RPAP1	Q9BWH6	1393 aa	Predicted RBP	5.66	□□□□□ -1.5
ECHDC1-223	ENST00000534442	CREBBP	Q92793	2442 aa		5.65	□□□□□ -1.5
ECHDC1-223	ENST00000534442	LOC107983988	A0A1B0GUW6	1196 aa	Predicted RBP	5.65	□□□□□ -1.5
ECHDC1-223	ENST00000534442	CCDC194	A0A1B0GVG4	234 aa		5.65	□□□□□ -1.5
ECHDC1-223	ENST00000534442		A0A1W2PQJ5	194 aa		5.65	□□□□□ -1.5
ECHDC1-223	ENST00000534442	TRIM75P	A6NK02	468 aa		5.65	□□□□□ -1.5
ECHDC1-223	ENST00000534442	PRR5-ARHGAP8	B1AHC4	643 aa		5.65	□□□□□ -1.5
ECHDC1-223	ENST00000534442	SRGAP3	O43295	1099 aa		5.65	□□□□□ -1.5
ECHDC1-223	ENST00000534442	PRC1	O43663	620 aa		5.65	□□□□□ -1.5
ECHDC1-223	ENST00000534442	KDM1A	O60341	852 aa		5.65	□□□□□ -1.5
ECHDC1-223	ENST00000534442	LPXN	O60711	386 aa		5.65	□□□□□ -1.5
ECHDC1-223	ENST00000534442	PRB1	P04280	392 aa		5.65	□□□□□ -1.5
ECHDC1-223	ENST00000534442	CA3	P07451	260 aa		5.65	□□□□□ -1.5
ECHDC1-223	ENST00000534442	RNASE1	P07998	156 aa	Known RBP	5.65	□□□□□ -1.5
ECHDC1-223	ENST00000534442	GJA4	P35212	333 aa		5.65	□□□□□ -1.5
ECHDC1-223	ENST00000534442	KRT85	P78386	507 aa		5.65	□□□□□ -1.5
ECHDC1-223	ENST00000534442	ARHGAP8	P85298	464 aa		5.65	□□□□□ -1.5
ECHDC1-223	ENST00000534442	CACNB2	Q08289	660 aa	Predicted RBP	5.65	□□□□□ -1.5
ECHDC1-223	ENST00000534442	MOGS	Q13724	837 aa		5.65	□□□□□ -1.5
ECHDC1-223	ENST00000534442	EPHA7	Q15375	998 aa		5.65	□□□□□ -1.5
ECHDC1-223	ENST00000534442	NXN	Q6DKJ4	435 aa		5.65	□□□□□ -1.5
ECHDC1-223	ENST00000534442	CCDC174	Q6PII3	467 aa		5.65	□□□□□ -1.5
ECHDC1-223	ENST00000534442	FRMD7	Q6ZUT3	714 aa		5.65	□□□□□ -1.5
ECHDC1-223	ENST00000534442	ZNF365	Q70YC5	407 aa		5.65	□□□□□ -1.5
ECHDC1-223	ENST00000534442	CABP7	Q86V35	215 aa		5.65	□□□□□ -1.5
ECHDC1-223	ENST00000534442	SIRT2	Q8IXJ6	389 aa		5.65	□□□□□ -1.5
ECHDC1-223	ENST00000534442	TCEAL8	Q8IYN2	117 aa		5.65	□□□□□ -1.5
ECHDC1-223	ENST00000534442	ZGPAT	Q8N5A5	531 aa	Known RBP	5.65	□□□□□ -1.5
ECHDC1-223	ENST00000534442	ARRDC4	Q8NCT1	418 aa		5.65	□□□□□ -1.5
ECHDC1-223	ENST00000534442	RTF1	Q92541	710 aa	Known RBP	5.65	□□□□□ -1.5
ECHDC1-223	ENST00000534442	LUC7L	Q9NQ29	371 aa	Known RBP	5.65	□□□□□ -1.5
ECHDC1-223	ENST00000534442	RIC8B	Q9NVN3	520 aa		5.65	□□□□□ -1.5
ECHDC1-223	ENST00000534442	CTNND2	Q9UQB3	1225 aa		5.65	□□□□□ -1.5
ECHDC1-223	ENST00000534442	NUB1	Q9Y5A7	615 aa		5.65	□□□□□ -1.5
ECHDC1-223	ENST00000534442	PPP2R3B	Q9Y5P8	575 aa		5.65	□□□□□ -1.5
ECHDC1-223	ENST00000534442	MYBBP1A	Q9BQG0	1328 aa	Known RBP	5.65	□□□□□ -1.51
ECHDC1-223	ENST00000534442	COL4A1	P02462	1669 aa		5.65	□□□□□ -1.51
ECHDC1-223	ENST00000534442	NAV3	Q8IVL0	2385 aa		5.65	□□□□□ -1.51
ECHDC1-223	ENST00000534442	AKAP13	Q12802	2813 aa		5.65	□□□□□ -1.51
ECHDC1-223	ENST00000534442	PSME4	Q14997	1843 aa		5.64	□□□□□ -1.51
ECHDC1-223	ENST00000534442		A0A1B0GTL3	188 aa		5.64	□□□□□ -1.51
ECHDC1-223	ENST00000534442	ZC3H12D	A2A288	527 aa	Known RBP	5.64	□□□□□ -1.51
ECHDC1-223	ENST00000534442	FOXP2	O15409	715 aa		5.64	□□□□□ -1.51
ECHDC1-223	ENST00000534442	BBOX1	O75936	387 aa		5.64	□□□□□ -1.51
ECHDC1-223	ENST00000534442	SNUPN	O95149	360 aa	Known RBP	5.64	□□□□□ -1.51

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