RNA–Protein interactions for RNA: ENST00000534131.1

CTSC-209, Transcript of cathepsin C, humanhuman

TSL 2

Gene CTSC, Length 583 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSC-209ENST00000534131 CETN1Q12798 172 aa12.77□□□□□ -0.37
CTSC-209ENST00000534131 DCAF17Q5H9S7 520 aaPredicted RBP12.77□□□□□ -0.37
CTSC-209ENST00000534131 GLRA4Q5JXX5 417 aa12.77□□□□□ -0.37
CTSC-209ENST00000534131 LRRC55Q6ZSA7 311 aa12.77□□□□□ -0.37
CTSC-209ENST00000534131 AOPEPQ8N6M6 819 aa12.77□□□□□ -0.37
CTSC-209ENST00000534131 ZSWIM2Q8NEG5 633 aa12.77□□□□□ -0.37
CTSC-209ENST00000534131 PARD3BQ8TEW8 1205 aa12.77□□□□□ -0.37
CTSC-209ENST00000534131 EEF2KMTQ96G04 330 aa12.77□□□□□ -0.37
CTSC-209ENST00000534131 ZNF558Q96NG5 402 aa12.77□□□□□ -0.37
CTSC-209ENST00000534131 PPP1R10Q96QC0 940 aaKnown RBP12.77□□□□□ -0.37
CTSC-209ENST00000534131 SLC28A3Q9HAS3 691 aa12.77□□□□□ -0.37
CTSC-209ENST00000534131 COL4A6Q14031 1691 aa12.77□□□□□ -0.37
CTSC-209ENST00000534131 RBAK-RBAKDNI3L0D1 243 aa12.76□□□□□ -0.37
CTSC-209ENST00000534131 PTGESO14684 152 aa12.76□□□□□ -0.37
CTSC-209ENST00000534131 N4BP1O75113 896 aaKnown RBP12.76□□□□□ -0.37
CTSC-209ENST00000534131 CLSTN1O94985 981 aa12.76□□□□□ -0.37
CTSC-209ENST00000534131 PAX3P23760 479 aa12.76□□□□□ -0.37
CTSC-209ENST00000534131 EEF1GP26641 437 aaKnown RBP12.76□□□□□ -0.37
CTSC-209ENST00000534131 GTF2H1P32780 548 aa12.76□□□□□ -0.37
CTSC-209ENST00000534131 PPM1AP35813 382 aa12.76□□□□□ -0.37
CTSC-209ENST00000534131 TRPC3Q13507 836 aa12.76□□□□□ -0.37
CTSC-209ENST00000534131 Q7L0L9 218 aa12.76□□□□□ -0.37
CTSC-209ENST00000534131 DEFB123Q8N688 67 aa12.76□□□□□ -0.37
CTSC-209ENST00000534131 CCDC150Q8NCX0 1101 aa12.76□□□□□ -0.37
CTSC-209ENST00000534131 FAM200AQ8TCP9 573 aa12.76□□□□□ -0.37
CTSC-209ENST00000534131 SP7Q8TDD2 431 aaPredicted RBP12.76□□□□□ -0.37
CTSC-209ENST00000534131 CNOT6LQ96LI5 555 aaKnown RBP12.76□□□□□ -0.37
CTSC-209ENST00000534131 NRDE2Q9H7Z3 1164 aa12.76□□□□□ -0.37
CTSC-209ENST00000534131 RC3H2Q9HBD1 1191 aaKnown RBP12.76□□□□□ -0.37
CTSC-209ENST00000534131 INTS13Q9NVM9 706 aa12.76□□□□□ -0.37
CTSC-209ENST00000534131 DPP3Q9NY33 737 aa12.76□□□□□ -0.37
CTSC-209ENST00000534131 STK39Q9UEW8 545 aa12.76□□□□□ -0.37
CTSC-209ENST00000534131 ITGA11Q9UKX5 1188 aa12.76□□□□□ -0.37
CTSC-209ENST00000534131 UTP18Q9Y5J1 556 aaKnown RBP eCLIP12.76□□□□□ -0.37
CTSC-209ENST00000534131 MRPL42Q9Y6G3 142 aaKnown RBP12.76□□□□□ -0.37
CTSC-209ENST00000534131 ARHGEF37A1IGU5 675 aa12.75□□□□□ -0.37
CTSC-209ENST00000534131 LRRIQ3A6PVS8 624 aaPredicted RBP12.75□□□□□ -0.37
CTSC-209ENST00000534131 KCNJ18B7U540 433 aa12.75□□□□□ -0.37
CTSC-209ENST00000534131 TRAPPC3O43617 180 aa12.75□□□□□ -0.37
CTSC-209ENST00000534131 TADA2AO75478 443 aa12.75□□□□□ -0.37
CTSC-209ENST00000534131 RB1P06400 928 aa12.75□□□□□ -0.37
CTSC-209ENST00000534131 CA3P07451 260 aa12.75□□□□□ -0.37
CTSC-209ENST00000534131 NFICP08651 508 aa12.75□□□□□ -0.37
CTSC-209ENST00000534131 KRT19P08727 400 aa12.75□□□□□ -0.37
CTSC-209ENST00000534131 PNPLA4P41247 253 aa12.75□□□□□ -0.37
CTSC-209ENST00000534131 MARSP56192 900 aaKnown RBP12.75□□□□□ -0.37
CTSC-209ENST00000534131 BCAR1P56945 870 aa12.75□□□□□ -0.37
CTSC-209ENST00000534131 RBP5P82980 135 aa12.75□□□□□ -0.37
CTSC-209ENST00000534131 KRT17Q04695 432 aa12.75□□□□□ -0.37
CTSC-209ENST00000534131 BIRC3Q13489 604 aa12.75□□□□□ -0.37
CTSC-209ENST00000534131 KCNJ12Q14500 433 aa12.75□□□□□ -0.37
CTSC-209ENST00000534131 BMS1Q14692 1282 aaKnown RBP12.75□□□□□ -0.37
CTSC-209ENST00000534131 PPP2R2DQ66LE6 453 aa12.75□□□□□ -0.37
CTSC-209ENST00000534131 GPR153Q6NV75 609 aa12.75□□□□□ -0.37
CTSC-209ENST00000534131 DCLRE1AQ6PJP8 1040 aa12.75□□□□□ -0.37
CTSC-209ENST00000534131 KCNT2Q6UVM3 1135 aa12.75□□□□□ -0.37
CTSC-209ENST00000534131 ZNF280BQ86YH2 543 aa12.75□□□□□ -0.37
CTSC-209ENST00000534131 COLGALT2Q8IYK4 626 aa12.75□□□□□ -0.37
CTSC-209ENST00000534131 COLGALT1Q8NBJ5 622 aa12.75□□□□□ -0.37
CTSC-209ENST00000534131 GSTCDQ8NEC7 633 aa12.75□□□□□ -0.37
CTSC-209ENST00000534131 ZNF560Q96MR9 790 aa12.75□□□□□ -0.37
CTSC-209ENST00000534131 ZMAT2Q96NC0 199 aaKnown RBP12.75□□□□□ -0.37
CTSC-209ENST00000534131 TGS1Q96RS0 853 aaKnown RBP12.75□□□□□ -0.37
CTSC-209ENST00000534131 PBX4Q9BYU1 374 aa12.75□□□□□ -0.37
CTSC-209ENST00000534131 NKX2-4Q9H2Z4 354 aa12.75□□□□□ -0.37
CTSC-209ENST00000534131 CWH43Q9H720 699 aa12.75□□□□□ -0.37
CTSC-209ENST00000534131 MMRN2Q9H8L6 949 aa12.75□□□□□ -0.37
CTSC-209ENST00000534131 FANCLQ9NW38 375 aa12.75□□□□□ -0.37
CTSC-209ENST00000534131 PUF60Q9UHX1 559 aaKnown RBP12.75□□□□□ -0.37
CTSC-209ENST00000534131 NUB1Q9Y5A7 615 aa12.75□□□□□ -0.37
CTSC-209ENST00000534131 SCN1AP35498 2009 aa12.74□□□□□ -0.37
CTSC-209ENST00000534131 LINC01553A4QN01 128 aa12.74□□□□□ -0.37
CTSC-209ENST00000534131 CASTOR2A6NHX0 329 aa12.74□□□□□ -0.37
CTSC-209ENST00000534131 PES1O00541 588 aaKnown RBP12.74□□□□□ -0.37
CTSC-209ENST00000534131 NRP1O14786 923 aa12.74□□□□□ -0.37
CTSC-209ENST00000534131 DDHD2O94830 711 aa12.74□□□□□ -0.37
CTSC-209ENST00000534131 GALTP07902 379 aa12.74□□□□□ -0.37
CTSC-209ENST00000534131 DNAJB2P25686 324 aa12.74□□□□□ -0.37
CTSC-209ENST00000534131 LRPAP1P30533 357 aa12.74□□□□□ -0.37
CTSC-209ENST00000534131 CTNNB1P35222 781 aa12.74□□□□□ -0.37
CTSC-209ENST00000534131 AFF1P51825 1210 aaKnown RBP12.74□□□□□ -0.37
CTSC-209ENST00000534131 DSC1Q08554 894 aa12.74□□□□□ -0.37
CTSC-209ENST00000534131 MYO1EQ12965 1108 aa12.74□□□□□ -0.37
CTSC-209ENST00000534131 ZBTB6Q15916 424 aa12.74□□□□□ -0.37
CTSC-209ENST00000534131 MAN2A1Q16706 1144 aa12.74□□□□□ -0.37
CTSC-209ENST00000534131 LMBRD2Q68DH5 695 aaPredicted RBP12.74□□□□□ -0.37
CTSC-209ENST00000534131 KRT39Q6A163 491 aa12.74□□□□□ -0.37
CTSC-209ENST00000534131 FAM109BQ6ICB4 259 aaPredicted RBP12.74□□□□□ -0.37
CTSC-209ENST00000534131 EFCAB13Q8IY85 973 aa12.74□□□□□ -0.37
CTSC-209ENST00000534131 EFCAB3Q8N7B9 438 aa12.74□□□□□ -0.37
CTSC-209ENST00000534131 CLP1Q92989 425 aaKnown RBP12.74□□□□□ -0.37
CTSC-209ENST00000534131 TIFAQ96CG3 184 aa12.74□□□□□ -0.37
CTSC-209ENST00000534131 TMEM169Q96HH4 297 aa12.74□□□□□ -0.37
CTSC-209ENST00000534131 MED15Q96RN5 788 aa12.74□□□□□ -0.37
CTSC-209ENST00000534131 PLVAPQ9BX97 442 aa12.74□□□□□ -0.37
CTSC-209ENST00000534131 IMPG2Q9BZV3 1241 aa12.74□□□□□ -0.37
CTSC-209ENST00000534131 MTMR12Q9C0I1 747 aa12.74□□□□□ -0.37
CTSC-209ENST00000534131 CBX8Q9HC52 389 aa12.74□□□□□ -0.37
CTSC-209ENST00000534131 TMEM8AQ9HCN3 771 aa12.74□□□□□ -0.37
CTSC-209ENST00000534131 SAMSN1Q9NSI8 373 aaKnown RBP12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms