RNA–Protein interactions for RNA: ENST00000534091.1

LDLRAD3-206, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

TSL 4

Gene LDLRAD3, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-206ENST00000534091 AP3M2P53677 418 aa10.88□□□□□ -0.67
LDLRAD3-206ENST00000534091 NLRP11P59045 1033 aaKnown RBP10.88□□□□□ -0.67
LDLRAD3-206ENST00000534091 DLG4P78352 724 aa10.88□□□□□ -0.67
LDLRAD3-206ENST00000534091 SMYD5Q6GMV2 418 aa10.88□□□□□ -0.67
LDLRAD3-206ENST00000534091 TRIM65Q6PJ69 517 aa10.88□□□□□ -0.67
LDLRAD3-206ENST00000534091 WDR59Q6PJI9 974 aa10.88□□□□□ -0.67
LDLRAD3-206ENST00000534091 C15orf39Q6ZRI6 1047 aa10.88□□□□□ -0.67
LDLRAD3-206ENST00000534091 SLC24A5Q71RS6 500 aa10.88□□□□□ -0.67
LDLRAD3-206ENST00000534091 CACNA2D4Q7Z3S7 1137 aa10.88□□□□□ -0.67
LDLRAD3-206ENST00000534091 FMNL3Q8IVF7 1028 aa10.88□□□□□ -0.67
LDLRAD3-206ENST00000534091 CRIPAKQ8N1N5 446 aa10.88□□□□□ -0.67
LDLRAD3-206ENST00000534091 RDH13Q8NBN7 331 aa10.88□□□□□ -0.67
LDLRAD3-206ENST00000534091 EHBP1Q8NDI1 1231 aa10.88□□□□□ -0.67
LDLRAD3-206ENST00000534091 LMO3Q8TAP4 145 aa10.88□□□□□ -0.67
LDLRAD3-206ENST00000534091 NLRP7Q8WX94 980 aa10.88□□□□□ -0.67
LDLRAD3-206ENST00000534091 ZNF689Q96CS4 500 aaPredicted RBP10.88□□□□□ -0.67
LDLRAD3-206ENST00000534091 ZBTB45Q96K62 511 aaPredicted RBP10.88□□□□□ -0.67
LDLRAD3-206ENST00000534091 FAM213AQ9BRX8 229 aa10.88□□□□□ -0.67
LDLRAD3-206ENST00000534091 CRACR2AQ9BSW2 395 aa10.88□□□□□ -0.67
LDLRAD3-206ENST00000534091 GCOM2Q9BZD3 368 aaPredicted RBP10.88□□□□□ -0.67
LDLRAD3-206ENST00000534091 TMEM117Q9H0C3 514 aa10.88□□□□□ -0.67
LDLRAD3-206ENST00000534091 PRDM12Q9H4Q4 367 aa10.88□□□□□ -0.67
LDLRAD3-206ENST00000534091 CHST12Q9NRB3 414 aa10.88□□□□□ -0.67
LDLRAD3-206ENST00000534091 RGS18Q9NS28 235 aa10.88□□□□□ -0.67
LDLRAD3-206ENST00000534091 ZNHIT6Q9NWK9 470 aaKnown RBP10.88□□□□□ -0.67
LDLRAD3-206ENST00000534091 ANKFY1Q9P2R3 1169 aa10.88□□□□□ -0.67
LDLRAD3-206ENST00000534091 MYH10P35580 1976 aa10.87□□□□□ -0.67
LDLRAD3-206ENST00000534091 SSU72P8A0A1W2PR75 194 aa10.87□□□□□ -0.67
LDLRAD3-206ENST00000534091 LINC01553A4QN01 128 aa10.87□□□□□ -0.67
LDLRAD3-206ENST00000534091 TTLL13PA6NNM8 815 aa10.87□□□□□ -0.67
LDLRAD3-206ENST00000534091 C5orf67F2Z3F1 127 aa10.87□□□□□ -0.67
LDLRAD3-206ENST00000534091 HOXA2O43364 376 aa10.87□□□□□ -0.67
LDLRAD3-206ENST00000534091 ZC3H11AO75152 810 aaKnown RBP eCLIP10.87□□□□□ -0.67
LDLRAD3-206ENST00000534091 DGKIO75912 1065 aa10.87□□□□□ -0.67
LDLRAD3-206ENST00000534091 SKIP12755 728 aa10.87□□□□□ -0.67
LDLRAD3-206ENST00000534091 DARSP14868 501 aaKnown RBP10.87□□□□□ -0.67
LDLRAD3-206ENST00000534091 MYOGP15173 224 aa10.87□□□□□ -0.67
LDLRAD3-206ENST00000534091 AXLP30530 894 aa10.87□□□□□ -0.67
LDLRAD3-206ENST00000534091 CLCN1P35523 988 aa10.87□□□□□ -0.67
LDLRAD3-206ENST00000534091 MATR3P43243 847 aaKnown RBP eCLIP10.87□□□□□ -0.67
LDLRAD3-206ENST00000534091 JAM2P57087 298 aa10.87□□□□□ -0.67
LDLRAD3-206ENST00000534091 POLR2FP61218 127 aaKnown RBP10.87□□□□□ -0.67
LDLRAD3-206ENST00000534091 ZNF568Q3ZCX4 644 aa10.87□□□□□ -0.67
LDLRAD3-206ENST00000534091 E4F1Q66K89 784 aaPredicted RBP10.87□□□□□ -0.67
LDLRAD3-206ENST00000534091 APBB1IPQ7Z5R6 666 aaPredicted RBP10.87□□□□□ -0.67
LDLRAD3-206ENST00000534091 CMTR2Q8IYT2 770 aaKnown RBP10.87□□□□□ -0.67
LDLRAD3-206ENST00000534091 CCDC170Q8IYT3 715 aa10.87□□□□□ -0.67
LDLRAD3-206ENST00000534091 CCAR2Q8N163 923 aaKnown RBP10.87□□□□□ -0.67
LDLRAD3-206ENST00000534091 CLP1Q92989 425 aaKnown RBP10.87□□□□□ -0.67
LDLRAD3-206ENST00000534091 CGRRF1Q99675 332 aa10.87□□□□□ -0.67
LDLRAD3-206ENST00000534091 TRAIPQ9BWF2 469 aa10.87□□□□□ -0.67
LDLRAD3-206ENST00000534091 PLVAPQ9BX97 442 aa10.87□□□□□ -0.67
LDLRAD3-206ENST00000534091 INTS2Q9H0H0 1204 aaKnown RBP10.87□□□□□ -0.67
LDLRAD3-206ENST00000534091 CDT1Q9H211 546 aa10.87□□□□□ -0.67
LDLRAD3-206ENST00000534091 RC3H2Q9HBD1 1191 aaKnown RBP10.87□□□□□ -0.67
LDLRAD3-206ENST00000534091 RRAGDQ9NQL2 400 aaPredicted RBP10.87□□□□□ -0.67
LDLRAD3-206ENST00000534091 RBAKQ9NYW8 714 aaPredicted RBP10.87□□□□□ -0.67
LDLRAD3-206ENST00000534091 AIPL1Q9NZN9 384 aa10.87□□□□□ -0.67
LDLRAD3-206ENST00000534091 APEX2Q9UBZ4 518 aa10.87□□□□□ -0.67
LDLRAD3-206ENST00000534091 CPSF3Q9UKF6 684 aaKnown RBP10.87□□□□□ -0.67
LDLRAD3-206ENST00000534091 ST3GAL5Q9UNP4 418 aa10.87□□□□□ -0.67
LDLRAD3-206ENST00000534091 A0A1B0GUA9 196 aa10.86□□□□□ -0.67
LDLRAD3-206ENST00000534091 GOLGA6L9A6NEM1 432 aa10.86□□□□□ -0.67
LDLRAD3-206ENST00000534091 SOWAHDA6NJG2 315 aa10.86□□□□□ -0.67
LDLRAD3-206ENST00000534091 LRRC53A6NM62 1247 aa10.86□□□□□ -0.67
LDLRAD3-206ENST00000534091 B4GALT5O43286 388 aa10.86□□□□□ -0.67
LDLRAD3-206ENST00000534091 ZSCAN12O43309 604 aa10.86□□□□□ -0.67
LDLRAD3-206ENST00000534091 TSPAN1O60635 241 aa10.86□□□□□ -0.67
LDLRAD3-206ENST00000534091 ERLIN2O94905 339 aa10.86□□□□□ -0.67
LDLRAD3-206ENST00000534091 ZSCAN20P17040 1043 aaPredicted RBP10.86□□□□□ -0.67
LDLRAD3-206ENST00000534091 ARF4P18085 180 aaPredicted RBP10.86□□□□□ -0.67
LDLRAD3-206ENST00000534091 ANXA13P27216 316 aa10.86□□□□□ -0.67
LDLRAD3-206ENST00000534091 GCLMP48507 274 aa10.86□□□□□ -0.67
LDLRAD3-206ENST00000534091 FAM189BP81408 668 aa10.86□□□□□ -0.67
LDLRAD3-206ENST00000534091 TMEM62Q0P6H9 643 aa10.86□□□□□ -0.67
LDLRAD3-206ENST00000534091 NFX1Q12986 1120 aaKnown RBP10.86□□□□□ -0.67
LDLRAD3-206ENST00000534091 MAPK8IP2Q13387 824 aaPredicted RBP10.86□□□□□ -0.67
LDLRAD3-206ENST00000534091 PTPROQ16827 1216 aa10.86□□□□□ -0.67
LDLRAD3-206ENST00000534091 KIZQ2M2Z5 673 aa10.86□□□□□ -0.67
LDLRAD3-206ENST00000534091 DCAF4L1Q3SXM0 396 aa10.86□□□□□ -0.67
LDLRAD3-206ENST00000534091 ZACNQ401N2 412 aa10.86□□□□□ -0.67
LDLRAD3-206ENST00000534091 SFMBT2Q5VUG0 894 aa10.86□□□□□ -0.67
LDLRAD3-206ENST00000534091 EEF1DP3Q658K8 133 aa10.86□□□□□ -0.67
LDLRAD3-206ENST00000534091 RAD9BQ6WBX8 426 aa10.86□□□□□ -0.67
LDLRAD3-206ENST00000534091 RRAGAQ7L523 313 aa10.86□□□□□ -0.67
LDLRAD3-206ENST00000534091 WDR49Q8IV35 697 aa10.86□□□□□ -0.67
LDLRAD3-206ENST00000534091 FIBCD1Q8N539 461 aa10.86□□□□□ -0.67
LDLRAD3-206ENST00000534091 FBXL13Q8NEE6 735 aa10.86□□□□□ -0.67
LDLRAD3-206ENST00000534091 FAM81BQ96LP2 452 aa10.86□□□□□ -0.67
LDLRAD3-206ENST00000534091 SCLT1Q96NL6 688 aa10.86□□□□□ -0.67
LDLRAD3-206ENST00000534091 FNBP1Q96RU3 617 aa10.86□□□□□ -0.67
LDLRAD3-206ENST00000534091 OSMRQ99650 979 aa10.86□□□□□ -0.67
LDLRAD3-206ENST00000534091 TCHPQ9BT92 498 aa10.86□□□□□ -0.67
LDLRAD3-206ENST00000534091 OSBPL7Q9BZF2 842 aa10.86□□□□□ -0.67
LDLRAD3-206ENST00000534091 LMAN2LQ9H0V9 348 aa10.86□□□□□ -0.67
LDLRAD3-206ENST00000534091 PDZD7Q9H5P4 517 aa10.86□□□□□ -0.67
LDLRAD3-206ENST00000534091 TMEM161AQ9NX61 479 aa10.86□□□□□ -0.67
LDLRAD3-206ENST00000534091 NOC2LQ9Y3T9 749 aaKnown RBP10.86□□□□□ -0.67
LDLRAD3-206ENST00000534091 PCDHB7Q9Y5E2 793 aa10.86□□□□□ -0.67
LDLRAD3-206ENST00000534091 FHOD1Q9Y613 1164 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms