RNA–Protein interactions for RNA: ENST00000533979.5

ATM-223, Transcript of ATM serine/threonine kinase, human

TSL 3

Gene ATM, Length 705 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ATM-223	ENST00000533979	TTPAL	Q9BTX7	342 aa		5.81	□□□□□ -1.48
ATM-223	ENST00000533979	AKIP1	Q9NQ31	210 aa		5.81	□□□□□ -1.48
ATM-223	ENST00000533979	OBP2A	Q9NY56	170 aa		5.81	□□□□□ -1.48
ATM-223	ENST00000533979	C11orf21	Q9P2W6	132 aa		5.81	□□□□□ -1.48
ATM-223	ENST00000533979	INTU	Q9ULD6	942 aa		5.81	□□□□□ -1.48
ATM-223	ENST00000533979	ZBTB21	Q9ULJ3	1066 aa		5.81	□□□□□ -1.48
ATM-223	ENST00000533979	DMRT1	Q9Y5R6	373 aa		5.81	□□□□□ -1.48
ATM-223	ENST00000533979	SMARCA2	P51531	1590 aa		5.8	□□□□□ -1.48
ATM-223	ENST00000533979	TNKS	O95271	1327 aa		5.8	□□□□□ -1.48
ATM-223	ENST00000533979	CXorf49	A8MYA2	514 aa	Predicted RBP	5.8	□□□□□ -1.48
ATM-223	ENST00000533979	RHOBTB3	O94955	611 aa		5.8	□□□□□ -1.48
ATM-223	ENST00000533979	GC	P02774	474 aa		5.8	□□□□□ -1.48
ATM-223	ENST00000533979	TRIM27	P14373	513 aa		5.8	□□□□□ -1.48
ATM-223	ENST00000533979	SREBF1	P36956	1147 aa		5.8	□□□□□ -1.48
ATM-223	ENST00000533979	RNASE9	P60153	205 aa	Known RBP	5.8	□□□□□ -1.48
ATM-223	ENST00000533979	CCT2	P78371	535 aa	Known RBP	5.8	□□□□□ -1.48
ATM-223	ENST00000533979	FAM189B	P81408	668 aa		5.8	□□□□□ -1.48
ATM-223	ENST00000533979	SRSF2	Q01130	221 aa	Known RBP	5.8	□□□□□ -1.48
ATM-223	ENST00000533979	RRP12	Q5JTH9	1297 aa	Known RBP	5.8	□□□□□ -1.48
ATM-223	ENST00000533979	ATXN7L2	Q5T6C5	722 aa	Predicted RBP	5.8	□□□□□ -1.48
ATM-223	ENST00000533979	LRRC55	Q6ZSA7	311 aa		5.8	□□□□□ -1.48
ATM-223	ENST00000533979	ARHGEF19	Q8IW93	802 aa		5.8	□□□□□ -1.48
ATM-223	ENST00000533979	TRMT2A	Q8IZ69	625 aa	Known RBP	5.8	□□□□□ -1.48
ATM-223	ENST00000533979	SPICE1	Q8N0Z3	855 aa		5.8	□□□□□ -1.48
ATM-223	ENST00000533979	PQLC1	Q8N2U9	271 aa		5.8	□□□□□ -1.48
ATM-223	ENST00000533979	REPS2	Q8NFH8	660 aa		5.8	□□□□□ -1.48
ATM-223	ENST00000533979	HOXB13	Q92826	284 aa	Predicted RBP	5.8	□□□□□ -1.48
ATM-223	ENST00000533979	NAP1L4	Q99733	375 aa	Known RBP	5.8	□□□□□ -1.48
ATM-223	ENST00000533979	SENP7	Q9BQF6	1050 aa		5.8	□□□□□ -1.48
ATM-223	ENST00000533979	ADI1	Q9BV57	179 aa		5.8	□□□□□ -1.48
ATM-223	ENST00000533979	MOCS1	Q9NZB8	636 aa		5.8	□□□□□ -1.48
ATM-223	ENST00000533979	TAGLN3	Q9UI15	199 aa		5.8	□□□□□ -1.48
ATM-223	ENST00000533979	LAS1L	Q9Y4W2	734 aa	Known RBP	5.8	□□□□□ -1.48
ATM-223	ENST00000533979	WASHC2A	Q641Q2	1341 aa		5.79	□□□□□ -1.48
ATM-223	ENST00000533979	VSTM5	A8MXK1	200 aa		5.79	□□□□□ -1.48
ATM-223	ENST00000533979	ADCY6	O43306	1168 aa		5.79	□□□□□ -1.48
ATM-223	ENST00000533979	HLA-DOA	P06340	250 aa		5.79	□□□□□ -1.48
ATM-223	ENST00000533979	IFIT2	P09913	472 aa	Known RBP	5.79	□□□□□ -1.48
ATM-223	ENST00000533979	FOXD4	Q12950	439 aa	Predicted RBP	5.79	□□□□□ -1.48
ATM-223	ENST00000533979	KLF1	Q13351	362 aa	Predicted RBP	5.79	□□□□□ -1.48
ATM-223	ENST00000533979	RAPGEF1	Q13905	1077 aa		5.79	□□□□□ -1.48
ATM-223	ENST00000533979	NOMO1	Q15155	1222 aa		5.79	□□□□□ -1.48
ATM-223	ENST00000533979	SMN1	Q16637	294 aa	Known RBP	5.79	□□□□□ -1.48
ATM-223	ENST00000533979	GRAMD1B	Q3KR37	738 aa		5.79	□□□□□ -1.48
ATM-223	ENST00000533979	INO80D	Q53TQ3	878 aa	Predicted RBP	5.79	□□□□□ -1.48
ATM-223	ENST00000533979	MBNL2	Q5VZF2	373 aa	Known RBP	5.79	□□□□□ -1.48
ATM-223	ENST00000533979	KCNV1	Q6PIU1	500 aa		5.79	□□□□□ -1.48
ATM-223	ENST00000533979	PCSK4	Q6UW60	755 aa		5.79	□□□□□ -1.48
ATM-223	ENST00000533979	PLXDC1	Q8IUK5	500 aa		5.79	□□□□□ -1.48
ATM-223	ENST00000533979	VRK3	Q8IV63	474 aa		5.79	□□□□□ -1.48
ATM-223	ENST00000533979	DDX55	Q8NHQ9	600 aa	Known RBP eCLIP	5.79	□□□□□ -1.48
ATM-223	ENST00000533979	UHRF1	Q96T88	793 aa	Predicted RBP	5.79	□□□□□ -1.48
ATM-223	ENST00000533979	MLST8	Q9BVC4	326 aa		5.79	□□□□□ -1.48
ATM-223	ENST00000533979	ZNF277	Q9NRM2	450 aa	Predicted RBP	5.79	□□□□□ -1.48
ATM-223	ENST00000533979	PACSIN3	Q9UKS6	424 aa		5.79	□□□□□ -1.48
ATM-223	ENST00000533979	PCDHGA2	Q9Y5H1	932 aa		5.79	□□□□□ -1.48
ATM-223	ENST00000533979	NES	P48681	1621 aa		5.78	□□□□□ -1.48
ATM-223	ENST00000533979	TRIM75P	A6NK02	468 aa		5.78	□□□□□ -1.48
ATM-223	ENST00000533979	ZNF185	O15231	689 aa		5.78	□□□□□ -1.48
ATM-223	ENST00000533979	NCR1	O76036	304 aa		5.78	□□□□□ -1.48
ATM-223	ENST00000533979	ENDOD1	O94919	500 aa		5.78	□□□□□ -1.48
ATM-223	ENST00000533979	SPATA31D3	P0C874	917 aa		5.78	□□□□□ -1.48
ATM-223	ENST00000533979	U2AF1L5	P0DN76	240 aa	Predicted RBP	5.78	□□□□□ -1.48
ATM-223	ENST00000533979	U2AF1	Q01081	240 aa	Known RBP eCLIP	5.78	□□□□□ -1.48
ATM-223	ENST00000533979	UBXN2B	Q14CS0	331 aa		5.78	□□□□□ -1.48
ATM-223	ENST00000533979	BEAN1	Q3B7T3	259 aa		5.78	□□□□□ -1.48
ATM-223	ENST00000533979	TMEM95	Q3KNT9	176 aa		5.78	□□□□□ -1.48
ATM-223	ENST00000533979	INAVA	Q3KP66	663 aa		5.78	□□□□□ -1.48
ATM-223	ENST00000533979	OTUD7B	Q6GQQ9	843 aa		5.78	□□□□□ -1.48
ATM-223	ENST00000533979	SPATA31D4	Q6ZUB0	917 aa		5.78	□□□□□ -1.48
ATM-223	ENST00000533979	CASKIN2	Q8WXE0	1202 aa		5.78	□□□□□ -1.48
ATM-223	ENST00000533979	STON2	Q8WXE9	905 aa		5.78	□□□□□ -1.48
ATM-223	ENST00000533979	SSH1	Q8WYL5	1049 aa		5.78	□□□□□ -1.48
ATM-223	ENST00000533979	MRI1	Q9BV20	369 aa		5.78	□□□□□ -1.48
ATM-223	ENST00000533979	SARG	Q9BW04	601 aa		5.78	□□□□□ -1.48
ATM-223	ENST00000533979	PTPRH	Q9HD43	1115 aa		5.78	□□□□□ -1.48
ATM-223	ENST00000533979	PRDM11	Q9NQV5	511 aa		5.78	□□□□□ -1.48
ATM-223	ENST00000533979	CCM2L	Q9NUG4	571 aa	Predicted RBP	5.78	□□□□□ -1.48
ATM-223	ENST00000533979	IP6K2	Q9UHH9	426 aa		5.78	□□□□□ -1.48
ATM-223	ENST00000533979	ATP11B	Q9Y2G3	1177 aa		5.78	□□□□□ -1.48
ATM-223	ENST00000533979	GPR45	Q9Y5Y3	372 aa		5.78	□□□□□ -1.48
ATM-223	ENST00000533979	CENPVL1	A0A0U1RR11	272 aa		5.77	□□□□□ -1.49
ATM-223	ENST00000533979	B3GALT2	O43825	422 aa		5.77	□□□□□ -1.49
ATM-223	ENST00000533979	NDUFA10	O95299	355 aa		5.77	□□□□□ -1.49
ATM-223	ENST00000533979	POMC	P01189	267 aa		5.77	□□□□□ -1.49
ATM-223	ENST00000533979	CD53	P19397	219 aa		5.77	□□□□□ -1.49
ATM-223	ENST00000533979	AGXT	P21549	392 aa		5.77	□□□□□ -1.49
ATM-223	ENST00000533979	GUCY1A2	P33402	732 aa		5.77	□□□□□ -1.49
ATM-223	ENST00000533979	WAS	P42768	502 aa		5.77	□□□□□ -1.49
ATM-223	ENST00000533979	HTR3A	P46098	478 aa		5.77	□□□□□ -1.49
ATM-223	ENST00000533979	INHBE	P58166	350 aa		5.77	□□□□□ -1.49
ATM-223	ENST00000533979	MGAT2	Q10469	447 aa		5.77	□□□□□ -1.49
ATM-223	ENST00000533979	PDCD4	Q53EL6	469 aa	Known RBP	5.77	□□□□□ -1.49
ATM-223	ENST00000533979	AGAP9	Q5VTM2	703 aa		5.77	□□□□□ -1.49
ATM-223	ENST00000533979	IL31	Q6EBC2	164 aa		5.77	□□□□□ -1.49
ATM-223	ENST00000533979	ARMC6	Q6NXE6	501 aa		5.77	□□□□□ -1.49
ATM-223	ENST00000533979	ABCF1	Q8NE71	845 aa	Known RBP eCLIP	5.77	□□□□□ -1.49
ATM-223	ENST00000533979	PJA1	Q8NG27	643 aa		5.77	□□□□□ -1.49
ATM-223	ENST00000533979	TIFA	Q96CG3	184 aa		5.77	□□□□□ -1.49
ATM-223	ENST00000533979	AGAP2	Q99490	1192 aa		5.77	□□□□□ -1.49

Retrieved 100 of 20,778 RNA–protein pairs in 23 ms