RNA–Protein interactions for RNA: ENST00000533953.5

CMTM1-219, Transcript of CKLF like MARVEL transmembrane domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CMTM1, Length 934 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM1-219ENST00000533953 HSPBP1Q9NZL4 362 aa14.55□□□□□ -0.08
CMTM1-219ENST00000533953 COG5Q9UP83 839 aa14.55□□□□□ -0.08
CMTM1-219ENST00000533953 TEX28O15482 410 aa14.54□□□□□ -0.08
CMTM1-219ENST00000533953 EXTL3O43909 919 aa14.54□□□□□ -0.08
CMTM1-219ENST00000533953 URODP06132 367 aa14.54□□□□□ -0.08
CMTM1-219ENST00000533953 SPATA31D3P0C874 917 aa14.54□□□□□ -0.08
CMTM1-219ENST00000533953 EPCAMP16422 314 aa14.54□□□□□ -0.08
CMTM1-219ENST00000533953 MRPS5P82675 430 aaKnown RBP14.54□□□□□ -0.08
CMTM1-219ENST00000533953 KYAT1Q16773 422 aa14.54□□□□□ -0.08
CMTM1-219ENST00000533953 KNOP1Q1ED39 458 aaKnown RBP14.54□□□□□ -0.08
CMTM1-219ENST00000533953 USP41Q3LFD5 358 aa14.54□□□□□ -0.08
CMTM1-219ENST00000533953 SPATA31D4Q6ZUB0 917 aa14.54□□□□□ -0.08
CMTM1-219ENST00000533953 C12orf76Q8N812 135 aaPredicted RBP14.54□□□□□ -0.08
CMTM1-219ENST00000533953 TMEM87AQ8NBN3 555 aa14.54□□□□□ -0.08
CMTM1-219ENST00000533953 PPP2R3CQ969Q6 453 aa14.54□□□□□ -0.08
CMTM1-219ENST00000533953 NECAB3Q96P71 396 aaPredicted RBP14.54□□□□□ -0.08
CMTM1-219ENST00000533953 PDE11AQ9HCR9 933 aa14.54□□□□□ -0.08
CMTM1-219ENST00000533953 CDH22Q9UJ99 828 aa14.54□□□□□ -0.08
CMTM1-219ENST00000533953 PCDHA5Q9Y5H7 936 aa14.54□□□□□ -0.08
CMTM1-219ENST00000533953 HCFC2Q9Y5Z7 792 aa14.54□□□□□ -0.08
CMTM1-219ENST00000533953 ATG2AQ2TAZ0 1938 aa14.54□□□□□ -0.08
CMTM1-219ENST00000533953 SF3B1O75533 1304 aaKnown RBP eCLIP14.53□□□□□ -0.08
CMTM1-219ENST00000533953 ADAM12O43184 909 aa14.53□□□□□ -0.08
CMTM1-219ENST00000533953 RHOBTB3O94955 611 aa14.53□□□□□ -0.08
CMTM1-219ENST00000533953 BMP1P13497 986 aa14.53□□□□□ -0.08
CMTM1-219ENST00000533953 KLRC2P26717 231 aa14.53□□□□□ -0.08
CMTM1-219ENST00000533953 TKTP29401 623 aaKnown RBP14.53□□□□□ -0.08
CMTM1-219ENST00000533953 DSG1Q02413 1049 aa14.53□□□□□ -0.08
CMTM1-219ENST00000533953 PSMD2Q13200 908 aa14.53□□□□□ -0.08
CMTM1-219ENST00000533953 KCNC3Q14003 757 aa14.53□□□□□ -0.08
CMTM1-219ENST00000533953 TMEM132DQ14C87 1099 aa14.53□□□□□ -0.08
CMTM1-219ENST00000533953 BMT2Q1RMZ1 405 aa14.53□□□□□ -0.08
CMTM1-219ENST00000533953 SPATA1Q5VX52 437 aa14.53□□□□□ -0.08
CMTM1-219ENST00000533953 PALB2Q86YC2 1186 aa14.53□□□□□ -0.08
CMTM1-219ENST00000533953 BRSK2Q8IWQ3 736 aa14.53□□□□□ -0.08
CMTM1-219ENST00000533953 GPD1LQ8N335 351 aa14.53□□□□□ -0.08
CMTM1-219ENST00000533953 SLC22A17Q8WUG5 538 aa14.53□□□□□ -0.08
CMTM1-219ENST00000533953 ATXN2LQ8WWM7 1075 aaKnown RBP14.53□□□□□ -0.08
CMTM1-219ENST00000533953 DDX27Q96GQ7 796 aaKnown RBP14.53□□□□□ -0.08
CMTM1-219ENST00000533953 UROC1Q96N76 676 aa14.53□□□□□ -0.08
CMTM1-219ENST00000533953 RBAKQ9NYW8 714 aaPredicted RBP14.53□□□□□ -0.08
CMTM1-219ENST00000533953 UBQLN1Q9UMX0 589 aaKnown RBP14.53□□□□□ -0.08
CMTM1-219ENST00000533953 TIMM13Q9Y5L4 95 aaPredicted RBP14.53□□□□□ -0.08
CMTM1-219ENST00000533953 BRWD1Q9NSI6 2320 aa14.53□□□□□ -0.08
CMTM1-219ENST00000533953 PTPRJQ12913 1337 aa14.52□□□□□ -0.08
CMTM1-219ENST00000533953 CARNS1A5YM72 827 aa14.52□□□□□ -0.09
CMTM1-219ENST00000533953 GRXCR2A6NFK2 248 aa14.52□□□□□ -0.09
CMTM1-219ENST00000533953 TMEM189-UBE2V1I3L0A0 370 aa14.52□□□□□ -0.09
CMTM1-219ENST00000533953 SPTLC1O15269 473 aa14.52□□□□□ -0.09
CMTM1-219ENST00000533953 MYL1P05976 194 aa14.52□□□□□ -0.09
CMTM1-219ENST00000533953 WEE2P0C1S8 567 aa14.52□□□□□ -0.09
CMTM1-219ENST00000533953 IL9P15248 144 aa14.52□□□□□ -0.09
CMTM1-219ENST00000533953 RPL9P32969 192 aaKnown RBP14.52□□□□□ -0.09
CMTM1-219ENST00000533953 TFAMQ00059 246 aaKnown RBP14.52□□□□□ -0.09
CMTM1-219ENST00000533953 BMS1Q14692 1282 aaKnown RBP14.52□□□□□ -0.09
CMTM1-219ENST00000533953 LEXMQ3ZCV2 418 aa14.52□□□□□ -0.09
CMTM1-219ENST00000533953 RSPO2Q6UXX9 243 aaPredicted RBP14.52□□□□□ -0.09
CMTM1-219ENST00000533953 BEST2Q8NFU1 509 aa14.52□□□□□ -0.09
CMTM1-219ENST00000533953 LNX1Q8TBB1 728 aaPredicted RBP14.52□□□□□ -0.09
CMTM1-219ENST00000533953 POP1Q99575 1024 aaKnown RBP14.52□□□□□ -0.09
CMTM1-219ENST00000533953 TTPALQ9BTX7 342 aa14.52□□□□□ -0.09
CMTM1-219ENST00000533953 KCTD10Q9H3F6 313 aa14.52□□□□□ -0.09
CMTM1-219ENST00000533953 ASB7Q9H672 318 aa14.52□□□□□ -0.09
CMTM1-219ENST00000533953 NUB1Q9Y5A7 615 aa14.52□□□□□ -0.09
CMTM1-219ENST00000533953 IRAK3Q9Y616 596 aa14.52□□□□□ -0.09
CMTM1-219ENST00000533953 TDRD15B5MCY1 1934 aaKnown RBP14.51□□□□□ -0.09
CMTM1-219ENST00000533953 UBE4BO95155 1302 aa14.51□□□□□ -0.09
CMTM1-219ENST00000533953 ZNF233A6NK53 670 aa14.51□□□□□ -0.09
CMTM1-219ENST00000533953 NCK2O43639 380 aa14.51□□□□□ -0.09
CMTM1-219ENST00000533953 LDHAP00338 332 aaKnown RBP14.51□□□□□ -0.09
CMTM1-219ENST00000533953 FGFR3P22607 806 aa14.51□□□□□ -0.09
CMTM1-219ENST00000533953 LRPAP1P30533 357 aa14.51□□□□□ -0.09
CMTM1-219ENST00000533953 MCM4P33991 863 aa14.51□□□□□ -0.09
CMTM1-219ENST00000533953 KCNB1Q14721 858 aa14.51□□□□□ -0.09
CMTM1-219ENST00000533953 C9orf57Q5W0N0 161 aa14.51□□□□□ -0.09
CMTM1-219ENST00000533953 PTCRAQ6ISU1 281 aaPredicted RBP14.51□□□□□ -0.09
CMTM1-219ENST00000533953 SYCE2Q6PIF2 218 aa14.51□□□□□ -0.09
CMTM1-219ENST00000533953 HS2ST1Q7LGA3 356 aa14.51□□□□□ -0.09
CMTM1-219ENST00000533953 CD302Q8IX05 232 aa14.51□□□□□ -0.09
CMTM1-219ENST00000533953 OR5B17Q8NGF7 314 aa14.51□□□□□ -0.09
CMTM1-219ENST00000533953 CCDC47Q96A33 483 aaKnown RBP14.51□□□□□ -0.09
CMTM1-219ENST00000533953 CCDC127Q96BQ5 260 aa14.51□□□□□ -0.09
CMTM1-219ENST00000533953 MSLNLQ96KJ4 702 aa14.51□□□□□ -0.09
CMTM1-219ENST00000533953 TIGD1Q96MW7 591 aa14.51□□□□□ -0.09
CMTM1-219ENST00000533953 CDCA3Q99618 268 aaPredicted RBP14.51□□□□□ -0.09
CMTM1-219ENST00000533953 CLSTN3Q9BQT9 956 aa14.51□□□□□ -0.09
CMTM1-219ENST00000533953 EMILIN2Q9BXX0 1053 aa14.51□□□□□ -0.09
CMTM1-219ENST00000533953 RXFP1Q9HBX9 757 aa14.51□□□□□ -0.09
CMTM1-219ENST00000533953 DPP3Q9NY33 737 aa14.51□□□□□ -0.09
CMTM1-219ENST00000533953 TRIP11Q15643 1979 aa14.51□□□□□ -0.09
CMTM1-219ENST00000533953 BIN1O00499 593 aa14.5□□□□□ -0.09
CMTM1-219ENST00000533953 KINO60870 393 aaKnown RBP14.5□□□□□ -0.09
CMTM1-219ENST00000533953 IL18RAPO95256 599 aa14.5□□□□□ -0.09
CMTM1-219ENST00000533953 CYP3A5P20815 502 aa14.5□□□□□ -0.09
CMTM1-219ENST00000533953 CASP4P49662 377 aa14.5□□□□□ -0.09
CMTM1-219ENST00000533953 CLCN4P51793 760 aa14.5□□□□□ -0.09
CMTM1-219ENST00000533953 CDR1P51861 262 aa14.5□□□□□ -0.09
CMTM1-219ENST00000533953 UBE2HP62256 183 aa14.5□□□□□ -0.09
CMTM1-219ENST00000533953 PSMD5Q16401 504 aa14.5□□□□□ -0.09
CMTM1-219ENST00000533953 SNRNP35Q16560 246 aaKnown RBP14.5□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms