RNA–Protein interactions for RNA: ENST00000533931.1

CTTN-215, Transcript of cortactin, humanhuman

TSL 3

Gene CTTN, Length 567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTTN-215ENST00000533931 NCAPHQ15003 741 aa16.85■□□□□ 0.29
CTTN-215ENST00000533931 UPP1Q16831 310 aa16.85■□□□□ 0.29
CTTN-215ENST00000533931 PPP2R2DQ66LE6 453 aa16.85■□□□□ 0.29
CTTN-215ENST00000533931 DCLRE1AQ6PJP8 1040 aa16.85■□□□□ 0.29
CTTN-215ENST00000533931 IRF2BP1Q8IU81 584 aa16.85■□□□□ 0.29
CTTN-215ENST00000533931 LRRC52Q8N7C0 313 aa16.85■□□□□ 0.29
CTTN-215ENST00000533931 COLGALT1Q8NBJ5 622 aa16.85■□□□□ 0.29
CTTN-215ENST00000533931 FAM200AQ8TCP9 573 aa16.85■□□□□ 0.29
CTTN-215ENST00000533931 PLEKHO2Q8TD55 490 aa16.85■□□□□ 0.29
CTTN-215ENST00000533931 CNOT6LQ96LI5 555 aaKnown RBP16.85■□□□□ 0.29
CTTN-215ENST00000533931 COLEC11Q9BWP8 271 aa16.85■□□□□ 0.29
CTTN-215ENST00000533931 DPP3Q9NY33 737 aa16.85■□□□□ 0.29
CTTN-215ENST00000533931 MAGEC2Q9UBF1 373 aaPredicted RBP16.85■□□□□ 0.29
CTTN-215ENST00000533931 TUBGCP4Q9UGJ1 667 aa16.85■□□□□ 0.29
CTTN-215ENST00000533931 CITO14578 2027 aa16.85■□□□□ 0.29
CTTN-215ENST00000533931 B4GALT3O60512 393 aa16.84■□□□□ 0.29
CTTN-215ENST00000533931 N4BP1O75113 896 aaKnown RBP16.84■□□□□ 0.29
CTTN-215ENST00000533931 MYOGP15173 224 aa16.84■□□□□ 0.29
CTTN-215ENST00000533931 SLC11A1P49279 550 aa16.84■□□□□ 0.29
CTTN-215ENST00000533931 PLCB3Q01970 1234 aa16.84■□□□□ 0.29
CTTN-215ENST00000533931 UBE3AQ05086 875 aa16.84■□□□□ 0.29
CTTN-215ENST00000533931 SOX4Q06945 474 aaPredicted RBP16.84■□□□□ 0.29
CTTN-215ENST00000533931 ZACNQ401N2 412 aa16.84■□□□□ 0.29
CTTN-215ENST00000533931 C1orf220Q5T0J3 134 aa16.84■□□□□ 0.29
CTTN-215ENST00000533931 SPOUT1Q5T280 376 aaKnown RBP16.84■□□□□ 0.29
CTTN-215ENST00000533931 C15orf39Q6ZRI6 1047 aa16.84■□□□□ 0.29
CTTN-215ENST00000533931 TRAPPC11Q7Z392 1133 aa16.84■□□□□ 0.29
CTTN-215ENST00000533931 SLC39A11Q8N1S5 342 aa16.84■□□□□ 0.29
CTTN-215ENST00000533931 SLC35C1Q96A29 364 aa16.84■□□□□ 0.29
CTTN-215ENST00000533931 C18orf25Q96B23 403 aaPredicted RBP16.84■□□□□ 0.29
CTTN-215ENST00000533931 EEF2KMTQ96G04 330 aa16.84■□□□□ 0.29
CTTN-215ENST00000533931 C11orf84Q9BUA3 381 aaPredicted RBP16.84■□□□□ 0.29
CTTN-215ENST00000533931 NKX2-4Q9H2Z4 354 aa16.84■□□□□ 0.29
CTTN-215ENST00000533931 TSPY26PQ9H489 355 aa16.84■□□□□ 0.29
CTTN-215ENST00000533931 TMEM8AQ9HCN3 771 aa16.84■□□□□ 0.29
CTTN-215ENST00000533931 SPG21Q9NZD8 308 aa16.84■□□□□ 0.29
CTTN-215ENST00000533931 DNAJB4Q9UDY4 337 aa16.84■□□□□ 0.29
CTTN-215ENST00000533931 LZTS1Q9Y250 596 aa16.84■□□□□ 0.29
CTTN-215ENST00000533931 FAN1Q9Y2M0 1017 aa16.84■□□□□ 0.29
CTTN-215ENST00000533931 PTPRJQ12913 1337 aa16.84■□□□□ 0.29
CTTN-215ENST00000533931 CHD9Q3L8U1 2897 aa16.83■□□□□ 0.29
CTTN-215ENST00000533931 PODXLO00592 558 aa16.83■□□□□ 0.28
CTTN-215ENST00000533931 PIRO00625 290 aa16.83■□□□□ 0.28
CTTN-215ENST00000533931 NRP1O14786 923 aa16.83■□□□□ 0.28
CTTN-215ENST00000533931 P4HA2O15460 535 aa16.83■□□□□ 0.28
CTTN-215ENST00000533931 STAU1O95793 577 aaKnown RBP16.83■□□□□ 0.28
CTTN-215ENST00000533931 ZNF18P17022 549 aa16.83■□□□□ 0.28
CTTN-215ENST00000533931 RBP5P82980 135 aa16.83■□□□□ 0.28
CTTN-215ENST00000533931 ELAVL2Q12926 359 aaKnown RBP16.83■□□□□ 0.28
CTTN-215ENST00000533931 PDCD11Q14690 1871 aaKnown RBP16.83■□□□□ 0.28
CTTN-215ENST00000533931 IQCB1Q15051 598 aa16.83■□□□□ 0.28
CTTN-215ENST00000533931 EPC2Q52LR7 807 aa16.83■□□□□ 0.28
CTTN-215ENST00000533931 C9orf57Q5W0N0 161 aa16.83■□□□□ 0.28
CTTN-215ENST00000533931 GPR65Q8IYL9 337 aa16.83■□□□□ 0.28
CTTN-215ENST00000533931 C1orf127Q8N9H9 656 aa16.83■□□□□ 0.28
CTTN-215ENST00000533931 OR5B17Q8NGF7 314 aa16.83■□□□□ 0.28
CTTN-215ENST00000533931 CXorf38Q8TB03 319 aa16.83■□□□□ 0.28
CTTN-215ENST00000533931 ZNF560Q96MR9 790 aa16.83■□□□□ 0.28
CTTN-215ENST00000533931 MTMR12Q9C0I1 747 aa16.83■□□□□ 0.28
CTTN-215ENST00000533931 ANK1P16157 1881 aa16.82■□□□□ 0.28
CTTN-215ENST00000533931 ARHGEF37A1IGU5 675 aa16.82■□□□□ 0.28
CTTN-215ENST00000533931 CASTOR2A6NHX0 329 aa16.82■□□□□ 0.28
CTTN-215ENST00000533931 BECN2A8MW95 431 aa16.82■□□□□ 0.28
CTTN-215ENST00000533931 TRAPPC3O43617 180 aa16.82■□□□□ 0.28
CTTN-215ENST00000533931 EFEMP2O95967 443 aa16.82■□□□□ 0.28
CTTN-215ENST00000533931 C4BPAP04003 597 aaKnown RBP16.82■□□□□ 0.28
CTTN-215ENST00000533931 ATICP31939 592 aa16.82■□□□□ 0.28
CTTN-215ENST00000533931 CTNNB1P35222 781 aa16.82■□□□□ 0.28
CTTN-215ENST00000533931 OR1G1P47890 313 aa16.82■□□□□ 0.28
CTTN-215ENST00000533931 AARSP49588 968 aaKnown RBP eCLIP16.82■□□□□ 0.28
CTTN-215ENST00000533931 CLCNKBP51801 687 aa16.82■□□□□ 0.28
CTTN-215ENST00000533931 TPM4P67936 248 aa16.82■□□□□ 0.28
CTTN-215ENST00000533931 DLG4P78352 724 aa16.82■□□□□ 0.28
CTTN-215ENST00000533931 KRT39Q6A163 491 aa16.82■□□□□ 0.28
CTTN-215ENST00000533931 SV2AQ7L0J3 742 aa16.82■□□□□ 0.28
CTTN-215ENST00000533931 DHX40Q8IX18 779 aaKnown RBP16.82■□□□□ 0.28
CTTN-215ENST00000533931 AOPEPQ8N6M6 819 aa16.82■□□□□ 0.28
CTTN-215ENST00000533931 ANKRD20A12PQ8NF67 263 aa16.82■□□□□ 0.28
CTTN-215ENST00000533931 ZNF516Q92618 1163 aa16.82■□□□□ 0.28
CTTN-215ENST00000533931 TAF4BQ92750 862 aa16.82■□□□□ 0.28
CTTN-215ENST00000533931 TMEM169Q96HH4 297 aa16.82■□□□□ 0.28
CTTN-215ENST00000533931 IGSF21Q96ID5 467 aa16.82■□□□□ 0.28
CTTN-215ENST00000533931 FAXDC2Q96IV6 333 aa16.82■□□□□ 0.28
CTTN-215ENST00000533931 VRTNQ9H8Y1 702 aa16.82■□□□□ 0.28
CTTN-215ENST00000533931 FANCLQ9NW38 375 aa16.82■□□□□ 0.28
CTTN-215ENST00000533931 MARCH5Q9NX47 278 aa16.82■□□□□ 0.28
CTTN-215ENST00000533931 HCSTQ9UBK5 93 aa16.82■□□□□ 0.28
CTTN-215ENST00000533931 ADAM28Q9UKQ2 775 aa16.82■□□□□ 0.28
CTTN-215ENST00000533931 R3HCC1Q9Y3T6 440 aaKnown RBP16.82■□□□□ 0.28
CTTN-215ENST00000533931 UTP18Q9Y5J1 556 aaKnown RBP eCLIP16.82■□□□□ 0.28
CTTN-215ENST00000533931 SF3B1O75533 1304 aaKnown RBP eCLIP16.81■□□□□ 0.28
CTTN-215ENST00000533931 TDRD15B5MCY1 1934 aaKnown RBP16.81■□□□□ 0.28
CTTN-215ENST00000533931 KCNJ18B7U540 433 aa16.81■□□□□ 0.28
CTTN-215ENST00000533931 B3GAT3O94766 335 aa16.81■□□□□ 0.28
CTTN-215ENST00000533931 ARHGEF15O94989 841 aa16.81■□□□□ 0.28
CTTN-215ENST00000533931 ITGB3P05106 788 aa16.81■□□□□ 0.28
CTTN-215ENST00000533931 TRIM49P0CI25 452 aa16.81■□□□□ 0.28
CTTN-215ENST00000533931 TRIM49CP0CI26 452 aa16.81■□□□□ 0.28
CTTN-215ENST00000533931 MXI1P50539 228 aa16.81■□□□□ 0.28
CTTN-215ENST00000533931 KRT17Q04695 432 aa16.81■□□□□ 0.28
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms