RNA–Protein interactions for RNA: ENST00000533730.5

CASP4-212, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 1,214 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-212ENST00000533730 U2AF2P26368 475 aaKnown RBP eCLIP8.57□□□□□ -1.04
CASP4-212ENST00000533730 TCF7P36402 384 aaPredicted RBP8.57□□□□□ -1.04
CASP4-212ENST00000533730 TRAPPC10P48553 1259 aa8.57□□□□□ -1.04
CASP4-212ENST00000533730 CDK7P50613 346 aa8.57□□□□□ -1.04
CASP4-212ENST00000533730 GUCY2FP51841 1108 aa8.57□□□□□ -1.04
CASP4-212ENST00000533730 EPHB1P54762 984 aa8.57□□□□□ -1.04
CASP4-212ENST00000533730 GUCY1B3Q02153 619 aa8.57□□□□□ -1.04
CASP4-212ENST00000533730 TRIM60Q495X7 471 aa8.57□□□□□ -1.04
CASP4-212ENST00000533730 STRA8Q7Z7C7 330 aa8.57□□□□□ -1.04
CASP4-212ENST00000533730 SESTD1Q86VW0 696 aa8.57□□□□□ -1.04
CASP4-212ENST00000533730 NOSTRINQ8IVI9 506 aa8.57□□□□□ -1.04
CASP4-212ENST00000533730 SMAP1Q8IYB5 467 aaPredicted RBP8.57□□□□□ -1.04
CASP4-212ENST00000533730 C7orf61Q8IZ16 206 aa8.57□□□□□ -1.04
CASP4-212ENST00000533730 RDM1Q8NG50 284 aa8.57□□□□□ -1.04
CASP4-212ENST00000533730 TNPO1Q92973 898 aaKnown RBP8.57□□□□□ -1.04
CASP4-212ENST00000533730 LENG9Q96B70 501 aa8.57□□□□□ -1.04
CASP4-212ENST00000533730 FAM20AQ96MK3 541 aa8.57□□□□□ -1.04
CASP4-212ENST00000533730 NACC1Q96RE7 527 aa8.57□□□□□ -1.04
CASP4-212ENST00000533730 CORO1BQ9BR76 489 aa8.57□□□□□ -1.04
CASP4-212ENST00000533730 SMARCAD1Q9H4L7 1026 aa8.57□□□□□ -1.04
CASP4-212ENST00000533730 AZI2Q9H6S1 392 aa8.57□□□□□ -1.04
CASP4-212ENST00000533730 NOL7Q9UMY1 257 aaKnown RBP8.57□□□□□ -1.04
CASP4-212ENST00000533730 EMSYQ7Z589 1322 aa8.56□□□□□ -1.04
CASP4-212ENST00000533730 TRBV23-1A0A0A0MS06 115 aa8.56□□□□□ -1.04
CASP4-212ENST00000533730 TRAV20A0A0B4J274 112 aa8.56□□□□□ -1.04
CASP4-212ENST00000533730 HAS3O00219 553 aa8.56□□□□□ -1.04
CASP4-212ENST00000533730 DHX15O43143 795 aaKnown RBP8.56□□□□□ -1.04
CASP4-212ENST00000533730 CCNT1O60563 726 aaKnown RBP8.56□□□□□ -1.04
CASP4-212ENST00000533730 KATNA1O75449 491 aa8.56□□□□□ -1.04
CASP4-212ENST00000533730 BAG4O95429 457 aaKnown RBP8.56□□□□□ -1.04
CASP4-212ENST00000533730 TDP2O95551 362 aa8.56□□□□□ -1.04
CASP4-212ENST00000533730 PGRP06401 933 aa8.56□□□□□ -1.04
CASP4-212ENST00000533730 CLTBP09497 229 aa8.56□□□□□ -1.04
CASP4-212ENST00000533730 ZNF286BP0CG31 522 aa8.56□□□□□ -1.04
CASP4-212ENST00000533730 RAG1P15918 1043 aa8.56□□□□□ -1.04
CASP4-212ENST00000533730 SFNP31947 248 aa8.56□□□□□ -1.04
CASP4-212ENST00000533730 CD68P34810 354 aaPredicted RBP8.56□□□□□ -1.04
CASP4-212ENST00000533730 SLC26A2P50443 739 aa8.56□□□□□ -1.04
CASP4-212ENST00000533730 ACTR2P61160 394 aa8.56□□□□□ -1.04
CASP4-212ENST00000533730 SP4Q02446 784 aa8.56□□□□□ -1.04
CASP4-212ENST00000533730 TLE2Q04725 743 aa8.56□□□□□ -1.04
CASP4-212ENST00000533730 ITGB3BPQ13352 177 aaPredicted RBP8.56□□□□□ -1.04
CASP4-212ENST00000533730 ADGRE1Q14246 886 aa8.56□□□□□ -1.04
CASP4-212ENST00000533730 POU4F3Q15319 338 aa8.56□□□□□ -1.04
CASP4-212ENST00000533730 KIAA0753Q2KHM9 967 aa8.56□□□□□ -1.04
CASP4-212ENST00000533730 FAM47CQ5HY64 1035 aa8.56□□□□□ -1.04
CASP4-212ENST00000533730 LRCH2Q5VUJ6 765 aa8.56□□□□□ -1.04
CASP4-212ENST00000533730 FAM160B1Q5W0V3 765 aa8.56□□□□□ -1.04
CASP4-212ENST00000533730 MIS18BP1Q6P0N0 1132 aa8.56□□□□□ -1.04
CASP4-212ENST00000533730 LRRTM3Q86VH5 581 aa8.56□□□□□ -1.04
CASP4-212ENST00000533730 FAM126BQ8IXS8 530 aa8.56□□□□□ -1.04
CASP4-212ENST00000533730 SLFN12Q8IYM2 578 aa8.56□□□□□ -1.04
CASP4-212ENST00000533730 C7orf31Q8N865 590 aa8.56□□□□□ -1.04
CASP4-212ENST00000533730 SLC5A5Q92911 643 aa8.56□□□□□ -1.04
CASP4-212ENST00000533730 WDR89Q96FK6 387 aaPredicted RBP8.56□□□□□ -1.04
CASP4-212ENST00000533730 C16orf70Q9BSU1 422 aa8.56□□□□□ -1.04
CASP4-212ENST00000533730 TEKT3Q9BXF9 490 aa8.56□□□□□ -1.04
CASP4-212ENST00000533730 NRSN2Q9GZP1 204 aa8.56□□□□□ -1.04
CASP4-212ENST00000533730 KRT82Q9NSB4 513 aa8.56□□□□□ -1.04
CASP4-212ENST00000533730 ERAP1Q9NZ08 941 aa8.56□□□□□ -1.04
CASP4-212ENST00000533730 SCN10AQ9Y5Y9 1956 aa8.55□□□□□ -1.04
CASP4-212ENST00000533730 CENPFP49454 3210 aa8.55□□□□□ -1.04
CASP4-212ENST00000533730 GSTTP1A0A1W2PQM5 241 aa8.55□□□□□ -1.04
CASP4-212ENST00000533730 WDR64B1ANS9 1081 aa8.55□□□□□ -1.04
CASP4-212ENST00000533730 MSH4O15457 936 aa8.55□□□□□ -1.04
CASP4-212ENST00000533730 DDX3YO15523 660 aaKnown RBP8.55□□□□□ -1.04
CASP4-212ENST00000533730 EDIL3O43854 480 aa8.55□□□□□ -1.04
CASP4-212ENST00000533730 NEMFO60524 1076 aa8.55□□□□□ -1.04
CASP4-212ENST00000533730 PQBP1O60828 265 aaKnown RBP8.55□□□□□ -1.04
CASP4-212ENST00000533730 PSMD10O75832 226 aa8.55□□□□□ -1.04
CASP4-212ENST00000533730 CYP11A1P05108 521 aa8.55□□□□□ -1.04
CASP4-212ENST00000533730 CTSBP07858 339 aa8.55□□□□□ -1.04
CASP4-212ENST00000533730 GNAT1P11488 350 aa8.55□□□□□ -1.04
CASP4-212ENST00000533730 MAOBP27338 520 aa8.55□□□□□ -1.04
CASP4-212ENST00000533730 JAK3P52333 1124 aa8.55□□□□□ -1.04
CASP4-212ENST00000533730 PSMC6P62333 389 aa8.55□□□□□ -1.04
CASP4-212ENST00000533730 C19orf57Q0VDD7 668 aa8.55□□□□□ -1.04
CASP4-212ENST00000533730 SUZ12Q15022 739 aaKnown RBP8.55□□□□□ -1.04
CASP4-212ENST00000533730 PPP2R5AQ15172 486 aa8.55□□□□□ -1.04
CASP4-212ENST00000533730 EARS2Q5JPH6 523 aaKnown RBP8.55□□□□□ -1.04
CASP4-212ENST00000533730 UTP14CQ5TAP6 766 aaKnown RBP8.55□□□□□ -1.04
CASP4-212ENST00000533730 MCTP1Q6DN14 999 aa8.55□□□□□ -1.04
CASP4-212ENST00000533730 PLPPR4Q7Z2D5 763 aa8.55□□□□□ -1.04
CASP4-212ENST00000533730 BRAPQ7Z569 592 aa8.55□□□□□ -1.04
CASP4-212ENST00000533730 RIN3Q8TB24 985 aa8.55□□□□□ -1.04
CASP4-212ENST00000533730 ETNPPLQ8TBG4 499 aa8.55□□□□□ -1.04
CASP4-212ENST00000533730 KAT2BQ92831 832 aa8.55□□□□□ -1.04
CASP4-212ENST00000533730 GLG1Q92896 1179 aa8.55□□□□□ -1.04
CASP4-212ENST00000533730 IPO9Q96P70 1041 aaKnown RBP8.55□□□□□ -1.04
CASP4-212ENST00000533730 BCAS3Q9H6U6 928 aa8.55□□□□□ -1.04
CASP4-212ENST00000533730 KCNMB3Q9NPA1 279 aa8.55□□□□□ -1.04
CASP4-212ENST00000533730 SUSD2Q9UGT4 822 aa8.55□□□□□ -1.04
CASP4-212ENST00000533730 PCDHA10Q9Y5I2 948 aa8.55□□□□□ -1.04
CASP4-212ENST00000533730 GRIN2DO15399 1336 aa8.54□□□□□ -1.04
CASP4-212ENST00000533730 IGKV6D-21A0A0A0MT36 114 aa8.54□□□□□ -1.04
CASP4-212ENST00000533730 DDX39AO00148 427 aaKnown RBP8.54□□□□□ -1.04
CASP4-212ENST00000533730 KIAA0355O15063 1070 aa8.54□□□□□ -1.04
CASP4-212ENST00000533730 SLC37A4O43826 429 aa8.54□□□□□ -1.04
CASP4-212ENST00000533730 DKC1O60832 514 aaKnown RBP eCLIP8.54□□□□□ -1.04
CASP4-212ENST00000533730 CCNE2O96020 404 aa8.54□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms