RNA–Protein interactions for RNA: ENST00000533018.1

PCF11-206, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 580 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-206ENST00000533018 VARS2Q5ST30 1063 aaKnown RBP19.47■□□□□ 0.71
PCF11-206ENST00000533018 PARM1Q6UWI2 310 aa19.47■□□□□ 0.71
PCF11-206ENST00000533018 RASSF8Q8NHQ8 419 aa19.47■□□□□ 0.71
PCF11-206ENST00000533018 ITFG1Q8TB96 612 aa19.47■□□□□ 0.71
PCF11-206ENST00000533018 FGF13Q92913 245 aa19.47■□□□□ 0.71
PCF11-206ENST00000533018 CALML4Q96GE6 196 aa19.47■□□□□ 0.71
PCF11-206ENST00000533018 HCFC1R1Q9NWW0 138 aa19.47■□□□□ 0.71
PCF11-206ENST00000533018 KCND2Q9NZV8 630 aa19.47■□□□□ 0.71
PCF11-206ENST00000533018 CNTN3Q9P232 1028 aa19.47■□□□□ 0.71
PCF11-206ENST00000533018 LARSQ9P2J5 1176 aaKnown RBP19.47■□□□□ 0.71
PCF11-206ENST00000533018 MYH15Q9Y2K3 1946 aa19.47■□□□□ 0.71
PCF11-206ENST00000533018 WDR87Q6ZQQ6 2873 aa19.46■□□□□ 0.71
PCF11-206ENST00000533018 MAPTP10636 758 aaKnown RBP19.46■□□□□ 0.71
PCF11-206ENST00000533018 RPL9P32969 192 aaKnown RBP19.46■□□□□ 0.71
PCF11-206ENST00000533018 MCM4P33991 863 aa19.46■□□□□ 0.71
PCF11-206ENST00000533018 UBA7P41226 1012 aa19.46■□□□□ 0.71
PCF11-206ENST00000533018 DTWD2Q8NBA8 298 aa19.46■□□□□ 0.71
PCF11-206ENST00000533018 FGF14Q92915 247 aa19.46■□□□□ 0.71
PCF11-206ENST00000533018 RPP25Q9BUL9 199 aaKnown RBP19.46■□□□□ 0.71
PCF11-206ENST00000533018 TBC1D17Q9HA65 648 aa19.46■□□□□ 0.71
PCF11-206ENST00000533018 PTPRZ1P23471 2315 aaPredicted RBP19.46■□□□□ 0.71
PCF11-206ENST00000533018 PDCD11Q14690 1871 aaKnown RBP19.45■□□□□ 0.7
PCF11-206ENST00000533018 H0YCG3 227 aa19.45■□□□□ 0.7
PCF11-206ENST00000533018 H7C4K7 107 aa19.45■□□□□ 0.7
PCF11-206ENST00000533018 ABLIM1O14639 778 aa19.45■□□□□ 0.7
PCF11-206ENST00000533018 PRRG1O14668 218 aa19.45■□□□□ 0.7
PCF11-206ENST00000533018 LRG1P02750 347 aa19.45■□□□□ 0.7
PCF11-206ENST00000533018 TMEM119Q4V9L6 283 aa19.45■□□□□ 0.7
PCF11-206ENST00000533018 SPECC1Q5M775 1068 aa19.45■□□□□ 0.7
PCF11-206ENST00000533018 ZPBP2Q6X784 338 aa19.45■□□□□ 0.7
PCF11-206ENST00000533018 MTSS1LQ765P7 747 aa19.45■□□□□ 0.7
PCF11-206ENST00000533018 CCDC105Q8IYK2 499 aa19.45■□□□□ 0.7
PCF11-206ENST00000533018 ZNF461Q8TAF7 563 aa19.45■□□□□ 0.7
PCF11-206ENST00000533018 ING5Q8WYH8 240 aa19.45■□□□□ 0.7
PCF11-206ENST00000533018 AK8Q96MA6 479 aa19.45■□□□□ 0.7
PCF11-206ENST00000533018 ARHGEF3Q9NR81 526 aa19.45■□□□□ 0.7
PCF11-206ENST00000533018 DNMT3BQ9UBC3 853 aaKnown RBP19.45■□□□□ 0.7
PCF11-206ENST00000533018 RIF1Q5UIP0 2472 aaKnown RBP19.45■□□□□ 0.7
PCF11-206ENST00000533018 SYN3O14994 580 aa19.44■□□□□ 0.7
PCF11-206ENST00000533018 KRT18P05783 430 aaKnown RBP19.44■□□□□ 0.7
PCF11-206ENST00000533018 CXCL8P10145 99 aa19.44■□□□□ 0.7
PCF11-206ENST00000533018 GPC5P78333 572 aa19.44■□□□□ 0.7
PCF11-206ENST00000533018 ROR1Q01973 937 aa19.44■□□□□ 0.7
PCF11-206ENST00000533018 SPAG1Q07617 926 aa19.44■□□□□ 0.7
PCF11-206ENST00000533018 ANGPT1Q15389 498 aa19.44■□□□□ 0.7
PCF11-206ENST00000533018 SLC10A6Q3KNW5 377 aa19.44■□□□□ 0.7
PCF11-206ENST00000533018 ARSHQ5FYA8 562 aa19.44■□□□□ 0.7
PCF11-206ENST00000533018 SLC8B1Q6J4K2 584 aa19.44■□□□□ 0.7
PCF11-206ENST00000533018 RTL10Q7L3V2 364 aa19.44■□□□□ 0.7
PCF11-206ENST00000533018 FRMD5Q7Z6J6 570 aa19.44■□□□□ 0.7
PCF11-206ENST00000533018 GPBP1Q86WP2 473 aa19.44■□□□□ 0.7
PCF11-206ENST00000533018 MYCT1Q8N699 235 aa19.44■□□□□ 0.7
PCF11-206ENST00000533018 ZHX3Q9H4I2 956 aa19.44■□□□□ 0.7
PCF11-206ENST00000533018 CYP4F11Q9HBI6 524 aa19.44■□□□□ 0.7
PCF11-206ENST00000533018 MRPS23Q9Y3D9 190 aaKnown RBP19.44■□□□□ 0.7
PCF11-206ENST00000533018 NOTCH4Q99466 2003 aa19.44■□□□□ 0.7
PCF11-206ENST00000533018 WDR27A2RRH5 827 aa19.43■□□□□ 0.7
PCF11-206ENST00000533018 FAM13AO94988 1023 aa19.43■□□□□ 0.7
PCF11-206ENST00000533018 MARCKSP29966 332 aaPredicted RBP19.43■□□□□ 0.7
PCF11-206ENST00000533018 NBL1P41271 181 aa19.43■□□□□ 0.7
PCF11-206ENST00000533018 LIG4P49917 911 aa19.43■□□□□ 0.7
PCF11-206ENST00000533018 MCL1Q07820 350 aa19.43■□□□□ 0.7
PCF11-206ENST00000533018 CTXN3Q4LDR2 81 aa19.43■□□□□ 0.7
PCF11-206ENST00000533018 HAUS6Q7Z4H7 955 aa19.43■□□□□ 0.7
PCF11-206ENST00000533018 KIF12Q96FN5 646 aa19.43■□□□□ 0.7
PCF11-206ENST00000533018 TBC1D32Q96NH3 1257 aa19.43■□□□□ 0.7
PCF11-206ENST00000533018 REEP2Q9BRK0 252 aa19.43■□□□□ 0.7
PCF11-206ENST00000533018 SLC2A4RGQ9NR83 387 aa19.43■□□□□ 0.7
PCF11-206ENST00000533018 TUBGCP4Q9UGJ1 667 aa19.43■□□□□ 0.7
PCF11-206ENST00000533018 KCNH3Q9ULD8 1083 aa19.43■□□□□ 0.7
PCF11-206ENST00000533018 SIT1Q9Y3P8 196 aa19.43■□□□□ 0.7
PCF11-206ENST00000533018 PROB1E7EW31 1015 aa19.42■□□□□ 0.7
PCF11-206ENST00000533018 K7ENM7 598 aa19.42■□□□□ 0.7
PCF11-206ENST00000533018 HNRNPDLO14979 420 aaKnown RBP19.42■□□□□ 0.7
PCF11-206ENST00000533018 MEFVO15553 781 aaPredicted RBP19.42■□□□□ 0.7
PCF11-206ENST00000533018 DCNP07585 359 aaKnown RBP19.42■□□□□ 0.7
PCF11-206ENST00000533018 RHOP08100 348 aa19.42■□□□□ 0.7
PCF11-206ENST00000533018 POU2F2P09086 479 aa19.42■□□□□ 0.7
PCF11-206ENST00000533018 PTPN2P17706 415 aa19.42■□□□□ 0.7
PCF11-206ENST00000533018 NCKAP1LP55160 1127 aa19.42■□□□□ 0.7
PCF11-206ENST00000533018 APPL2Q8NEU8 664 aa19.42■□□□□ 0.7
PCF11-206ENST00000533018 MCRS1Q96EZ8 462 aa19.42■□□□□ 0.7
PCF11-206ENST00000533018 KXD1Q9BQD3 176 aa19.42■□□□□ 0.7
PCF11-206ENST00000533018 CORO1BQ9BR76 489 aa19.42■□□□□ 0.7
PCF11-206ENST00000533018 PLEKHA5Q9HAU0 1116 aa19.42■□□□□ 0.7
PCF11-206ENST00000533018 FBXL5Q9UKA1 691 aa19.42■□□□□ 0.7
PCF11-206ENST00000533018 ODF2LQ9ULJ1 636 aa19.42■□□□□ 0.7
PCF11-206ENST00000533018 ABLIM3O94929 683 aa19.41■□□□□ 0.7
PCF11-206ENST00000533018 BMP15O95972 392 aa19.41■□□□□ 0.7
PCF11-206ENST00000533018 CLTAP09496 248 aa19.41■□□□□ 0.7
PCF11-206ENST00000533018 ATF2P15336 505 aa19.41■□□□□ 0.7
PCF11-206ENST00000533018 PPP2R3AQ06190 1150 aa19.41■□□□□ 0.7
PCF11-206ENST00000533018 SNW1Q13573 536 aaKnown RBP19.41■□□□□ 0.7
PCF11-206ENST00000533018 MCM6Q14566 821 aa19.41■□□□□ 0.7
PCF11-206ENST00000533018 KARSQ15046 597 aaKnown RBP19.41■□□□□ 0.7
PCF11-206ENST00000533018 ZNF280DQ6N043 979 aa19.41■□□□□ 0.7
PCF11-206ENST00000533018 PHLDB3Q6NSJ2 640 aa19.41■□□□□ 0.7
PCF11-206ENST00000533018 ASCL5Q7RTU5 278 aa19.41■□□□□ 0.7
PCF11-206ENST00000533018 BRAPQ7Z569 592 aa19.41■□□□□ 0.7
PCF11-206ENST00000533018 NPAS3Q8IXF0 933 aa19.41■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms