RNA–Protein interactions for RNA: ENST00000532997.5

BDNF-216, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 3,930 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-216ENST00000532997 ANKRD20A1Q5TYW2 823 aa9.97□□□□□ -0.81
BDNF-216ENST00000532997 DHX38Q92620 1227 aaKnown RBP9.97□□□□□ -0.81
BDNF-216ENST00000532997 HSD17B14Q9BPX1 270 aa9.97□□□□□ -0.81
BDNF-216ENST00000532997 C11orf70Q9BRQ4 267 aa9.97□□□□□ -0.81
BDNF-216ENST00000532997 TXLNGYQ9BZA5 131 aa9.97□□□□□ -0.81
BDNF-216ENST00000532997 DCLRE1BQ9H816 532 aa9.97□□□□□ -0.81
BDNF-216ENST00000532997 DDX4Q9NQI0 724 aaKnown RBP9.97□□□□□ -0.81
BDNF-216ENST00000532997 LAMB2P55268 1798 aa9.97□□□□□ -0.81
BDNF-216ENST00000532997 PIK3CDO00329 1044 aa9.97□□□□□ -0.81
BDNF-216ENST00000532997 TLR3O15455 904 aaKnown RBP9.97□□□□□ -0.81
BDNF-216ENST00000532997 CALB1P05937 261 aa9.97□□□□□ -0.81
BDNF-216ENST00000532997 SFNP31947 248 aa9.97□□□□□ -0.81
BDNF-216ENST00000532997 ARFIP2P53365 341 aa9.97□□□□□ -0.81
BDNF-216ENST00000532997 TCEAL1Q15170 157 aa9.97□□□□□ -0.81
BDNF-216ENST00000532997 DCAF12L1Q5VU92 463 aa9.97□□□□□ -0.81
BDNF-216ENST00000532997 FAM71AQ8IYT1 594 aa9.97□□□□□ -0.81
BDNF-216ENST00000532997 BTBD6Q96KE9 485 aa9.97□□□□□ -0.81
BDNF-216ENST00000532997 UNC45AQ9H3U1 944 aa9.97□□□□□ -0.81
BDNF-216ENST00000532997 DDX56Q9NY93 547 aaKnown RBP9.97□□□□□ -0.81
BDNF-216ENST00000532997 POLLQ9UGP5 575 aa9.97□□□□□ -0.81
BDNF-216ENST00000532997 SLC24A2Q9UI40 661 aa9.97□□□□□ -0.81
BDNF-216ENST00000532997 AJAP1Q9UKB5 411 aaPredicted RBP9.97□□□□□ -0.81
BDNF-216ENST00000532997 COG5Q9UP83 839 aa9.97□□□□□ -0.81
BDNF-216ENST00000532997 DENND3A2RUS2 1198 aa9.96□□□□□ -0.81
BDNF-216ENST00000532997 STAM2O75886 525 aa9.96□□□□□ -0.81
BDNF-216ENST00000532997 GJB6O95452 261 aa9.96□□□□□ -0.81
BDNF-216ENST00000532997 RALAP11233 206 aa9.96□□□□□ -0.81
BDNF-216ENST00000532997 NPR1P16066 1061 aa9.96□□□□□ -0.81
BDNF-216ENST00000532997 TBXAS1P24557 533 aaPredicted RBP9.96□□□□□ -0.81
BDNF-216ENST00000532997 ARSEP51690 589 aa9.96□□□□□ -0.81
BDNF-216ENST00000532997 PSMC5P62195 406 aa9.96□□□□□ -0.81
BDNF-216ENST00000532997 ACVR2BQ13705 512 aa9.96□□□□□ -0.81
BDNF-216ENST00000532997 CLEC16AQ2KHT3 1053 aa9.96□□□□□ -0.81
BDNF-216ENST00000532997 NOP9Q86U38 636 aaKnown RBP9.96□□□□□ -0.81
BDNF-216ENST00000532997 C12orf56Q8IXR9 622 aa9.96□□□□□ -0.81
BDNF-216ENST00000532997 ZBED8Q8IZ13 594 aa9.96□□□□□ -0.81
BDNF-216ENST00000532997 GPD1LQ8N335 351 aa9.96□□□□□ -0.81
BDNF-216ENST00000532997 TMC2Q8TDI7 906 aa9.96□□□□□ -0.81
BDNF-216ENST00000532997 SREK1Q8WXA9 508 aaKnown RBP9.96□□□□□ -0.81
BDNF-216ENST00000532997 TCHPQ9BT92 498 aa9.96□□□□□ -0.81
BDNF-216ENST00000532997 TMEM117Q9H0C3 514 aa9.96□□□□□ -0.81
BDNF-216ENST00000532997 DMAC2Q9NW81 257 aa9.96□□□□□ -0.81
BDNF-216ENST00000532997 CHORDC1Q9UHD1 332 aaPredicted RBP9.96□□□□□ -0.81
BDNF-216ENST00000532997 HERC5Q9UII4 1024 aaKnown RBP9.96□□□□□ -0.81
BDNF-216ENST00000532997 ADGRA3Q8IWK6 1321 aa9.96□□□□□ -0.81
BDNF-216ENST00000532997 WDR64B1ANS9 1081 aa9.96□□□□□ -0.82
BDNF-216ENST00000532997 CALB2P22676 271 aa9.96□□□□□ -0.82
BDNF-216ENST00000532997 CACNB3P54284 484 aa9.96□□□□□ -0.82
BDNF-216ENST00000532997 KRT76Q01546 638 aa9.96□□□□□ -0.82
BDNF-216ENST00000532997 PDIA2Q13087 525 aaKnown RBP9.96□□□□□ -0.82
BDNF-216ENST00000532997 MCPH1Q8NEM0 835 aa9.96□□□□□ -0.82
BDNF-216ENST00000532997 ATG4AQ8WYN0 398 aa9.96□□□□□ -0.82
BDNF-216ENST00000532997 MXRA8Q9BRK3 442 aa9.96□□□□□ -0.82
BDNF-216ENST00000532997 CBWD1Q9BRT8 395 aa9.96□□□□□ -0.82
BDNF-216ENST00000532997 RNPEPL1Q9HAU8 725 aa9.96□□□□□ -0.82
BDNF-216ENST00000532997 KCNQ5Q9NR82 932 aa9.96□□□□□ -0.82
BDNF-216ENST00000532997 LRRC4BQ9NT99 713 aa9.96□□□□□ -0.82
BDNF-216ENST00000532997 PARVAQ9NVD7 372 aa9.96□□□□□ -0.82
BDNF-216ENST00000532997 KIAA1551Q9HCM1 1747 aa9.96□□□□□ -0.82
BDNF-216ENST00000532997 A0A0G2JND7 137 aa9.96□□□□□ -0.82
BDNF-216ENST00000532997 SMAPO00193 183 aa9.96□□□□□ -0.82
BDNF-216ENST00000532997 NVLO15381 856 aaKnown RBP9.96□□□□□ -0.82
BDNF-216ENST00000532997 PSMD10O75832 226 aa9.96□□□□□ -0.82
BDNF-216ENST00000532997 PROSCO94903 275 aa9.96□□□□□ -0.82
BDNF-216ENST00000532997 PDHA1P08559 390 aa9.96□□□□□ -0.82
BDNF-216ENST00000532997 KRT16P08779 473 aa9.96□□□□□ -0.82
BDNF-216ENST00000532997 TAP1Q03518 808 aa9.96□□□□□ -0.82
BDNF-216ENST00000532997 TRPC3Q13507 836 aa9.96□□□□□ -0.82
BDNF-216ENST00000532997 TTC27Q6P3X3 843 aa9.96□□□□□ -0.82
BDNF-216ENST00000532997 SLC30A9Q6PML9 568 aa9.96□□□□□ -0.82
BDNF-216ENST00000532997 BZW1Q7L1Q6 419 aaKnown RBP9.96□□□□□ -0.82
BDNF-216ENST00000532997 SLC47A2Q86VL8 602 aa9.96□□□□□ -0.82
BDNF-216ENST00000532997 CCDC125Q86Z20 511 aa9.96□□□□□ -0.82
BDNF-216ENST00000532997 CFAP61Q8NHU2 1237 aa9.96□□□□□ -0.82
BDNF-216ENST00000532997 SLCO2A1Q92959 643 aa9.96□□□□□ -0.82
BDNF-216ENST00000532997 FEM1BQ9UK73 627 aa9.96□□□□□ -0.82
BDNF-216ENST00000532997 CORO1CQ9ULV4 474 aaPredicted RBP9.96□□□□□ -0.82
BDNF-216ENST00000532997 SYNPO2Q9UMS6 1093 aa9.96□□□□□ -0.82
BDNF-216ENST00000532997 ENTPD3O75355 529 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 ALAS1P13196 640 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 TARSP26639 723 aaKnown RBP9.95□□□□□ -0.82
BDNF-216ENST00000532997 PTPN4P29074 926 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 VHLP40337 213 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 SPIRE1Q08AE8 756 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 HIF1AQ16665 826 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 ACCSLQ4AC99 568 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.95□□□□□ -0.82
BDNF-216ENST00000532997 CPXCR1Q8N123 301 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 EXD1Q8NHP7 514 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 STK32AQ8WU08 396 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 SHC3Q92529 594 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 CEP170P1Q96L14 293 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 LGALS13Q9UHV8 139 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 BCS1LQ9Y276 419 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 C10orf71Q711Q0 1435 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 ROBO1Q9Y6N7 1651 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 WDR91A4D1P6 747 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 TCEA3O75764 348 aa9.95□□□□□ -0.82
BDNF-216ENST00000532997 YWHABP31946 246 aaKnown RBP9.95□□□□□ -0.82
BDNF-216ENST00000532997 MTMR1Q13613 665 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms