RNA–Protein interactions for RNA: ENST00000532877.1

COL16A1-217, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 5

Gene COL16A1, Length 534 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-217ENST00000532877 DERAQ9Y315 318 aa15.47■□□□□ 0.07
COL16A1-217ENST00000532877 PCDHB7Q9Y5E2 793 aa15.47■□□□□ 0.07
COL16A1-217ENST00000532877 TDRD15B5MCY1 1934 aaKnown RBP15.47■□□□□ 0.07
COL16A1-217ENST00000532877 SMIM28A0A1B0GU29 152 aa15.46■□□□□ 0.07
COL16A1-217ENST00000532877 INPPL1O15357 1258 aa15.46■□□□□ 0.07
COL16A1-217ENST00000532877 OFD1O75665 1012 aa15.46■□□□□ 0.07
COL16A1-217ENST00000532877 FGBP02675 491 aa15.46■□□□□ 0.07
COL16A1-217ENST00000532877 AMHP03971 560 aa15.46■□□□□ 0.07
COL16A1-217ENST00000532877 TMEM191BP0C7N4 346 aa15.46■□□□□ 0.07
COL16A1-217ENST00000532877 PLA2G5P39877 138 aa15.46■□□□□ 0.07
COL16A1-217ENST00000532877 MRE11P49959 708 aa15.46■□□□□ 0.07
COL16A1-217ENST00000532877 SCNN1GP51170 649 aa15.46■□□□□ 0.07
COL16A1-217ENST00000532877 AP3M2P53677 418 aa15.46■□□□□ 0.07
COL16A1-217ENST00000532877 DEFB103AP81534 67 aa15.46■□□□□ 0.07
COL16A1-217ENST00000532877 MYL7Q01449 175 aa15.46■□□□□ 0.07
COL16A1-217ENST00000532877 FILIP1LQ4L180 1135 aa15.46■□□□□ 0.07
COL16A1-217ENST00000532877 TDRD10Q5VZ19 366 aaKnown RBP15.46■□□□□ 0.07
COL16A1-217ENST00000532877 GLB1LQ6UWU2 654 aa15.46■□□□□ 0.07
COL16A1-217ENST00000532877 C15orf39Q6ZRI6 1047 aa15.46■□□□□ 0.07
COL16A1-217ENST00000532877 NT5DC4Q86YG4 428 aa15.46■□□□□ 0.07
COL16A1-217ENST00000532877 HELQQ8TDG4 1101 aa15.46■□□□□ 0.07
COL16A1-217ENST00000532877 ANKRD36BP1Q96IX9 119 aa15.46■□□□□ 0.07
COL16A1-217ENST00000532877 PPP1R10Q96QC0 940 aaKnown RBP15.46■□□□□ 0.07
COL16A1-217ENST00000532877 TRIM5Q9C035 493 aa15.46■□□□□ 0.07
COL16A1-217ENST00000532877 XPO4Q9C0E2 1151 aaKnown RBP15.46■□□□□ 0.07
COL16A1-217ENST00000532877 RNF216Q9NWF9 866 aaPredicted RBP15.46■□□□□ 0.07
COL16A1-217ENST00000532877 INPP5FQ9Y2H2 1132 aa15.46■□□□□ 0.07
COL16A1-217ENST00000532877 COL4A6Q14031 1691 aa15.46■□□□□ 0.07
COL16A1-217ENST00000532877 ZBBXA8MT70 800 aa15.45■□□□□ 0.06
COL16A1-217ENST00000532877 TEX33O43247 280 aa15.45■□□□□ 0.06
COL16A1-217ENST00000532877 HOXA2O43364 376 aa15.45■□□□□ 0.06
COL16A1-217ENST00000532877 CBFA2T2O43439 604 aa15.45■□□□□ 0.06
COL16A1-217ENST00000532877 N4BP1O75113 896 aaKnown RBP15.45■□□□□ 0.06
COL16A1-217ENST00000532877 TNNC2P02585 160 aa15.45■□□□□ 0.06
COL16A1-217ENST00000532877 C4BPAP04003 597 aaKnown RBP15.45■□□□□ 0.06
COL16A1-217ENST00000532877 KCNJ6P48051 423 aa15.45■□□□□ 0.06
COL16A1-217ENST00000532877 GRIN2CQ14957 1233 aa15.45■□□□□ 0.06
COL16A1-217ENST00000532877 NR1I3Q14994 352 aa15.45■□□□□ 0.06
COL16A1-217ENST00000532877 DUOXA2Q1HG44 320 aa15.45■□□□□ 0.06
COL16A1-217ENST00000532877 ZACNQ401N2 412 aa15.45■□□□□ 0.06
COL16A1-217ENST00000532877 FKBP15Q5T1M5 1219 aa15.45■□□□□ 0.06
COL16A1-217ENST00000532877 KRT39Q6A163 491 aa15.45■□□□□ 0.06
COL16A1-217ENST00000532877 SV2AQ7L0J3 742 aa15.45■□□□□ 0.06
COL16A1-217ENST00000532877 TSPAN18Q96SJ8 248 aa15.45■□□□□ 0.06
COL16A1-217ENST00000532877 MIOSQ9NXC5 875 aa15.45■□□□□ 0.06
COL16A1-217ENST00000532877 TUBGCP4Q9UGJ1 667 aa15.45■□□□□ 0.06
COL16A1-217ENST00000532877 FNDC1Q4ZHG4 1894 aaPredicted RBP15.45■□□□□ 0.06
COL16A1-217ENST00000532877 GBF1Q92538 1859 aa15.44■□□□□ 0.06
COL16A1-217ENST00000532877 PMM2O15305 246 aa15.44■□□□□ 0.06
COL16A1-217ENST00000532877 P4HA2O15460 535 aa15.44■□□□□ 0.06
COL16A1-217ENST00000532877 TPM3P06753 285 aa15.44■□□□□ 0.06
COL16A1-217ENST00000532877 GATMP50440 423 aa15.44■□□□□ 0.06
COL16A1-217ENST00000532877 GUCY2FP51841 1108 aa15.44■□□□□ 0.06
COL16A1-217ENST00000532877 UBXN1Q04323 297 aa15.44■□□□□ 0.06
COL16A1-217ENST00000532877 GRIK3Q13003 919 aa15.44■□□□□ 0.06
COL16A1-217ENST00000532877 BIRC3Q13489 604 aa15.44■□□□□ 0.06
COL16A1-217ENST00000532877 ZBTB6Q15916 424 aa15.44■□□□□ 0.06
COL16A1-217ENST00000532877 TMEM130Q8N3G9 435 aa15.44■□□□□ 0.06
COL16A1-217ENST00000532877 C1orf127Q8N9H9 656 aa15.44■□□□□ 0.06
COL16A1-217ENST00000532877 URGCPQ8TCY9 931 aa15.44■□□□□ 0.06
COL16A1-217ENST00000532877 CACTINQ8WUQ7 758 aaKnown RBP15.44■□□□□ 0.06
COL16A1-217ENST00000532877 HERVK_113Q902F9 699 aa15.44■□□□□ 0.06
COL16A1-217ENST00000532877 TOP1MTQ969P6 601 aa15.44■□□□□ 0.06
COL16A1-217ENST00000532877 C18orf25Q96B23 403 aaPredicted RBP15.44■□□□□ 0.06
COL16A1-217ENST00000532877 CXXC1Q9P0U4 656 aaPredicted RBP15.44■□□□□ 0.06
COL16A1-217ENST00000532877 UBQLN1Q9UMX0 589 aaKnown RBP15.44■□□□□ 0.06
COL16A1-217ENST00000532877 GTPBP10A4D1E9 387 aaKnown RBP15.43■□□□□ 0.06
COL16A1-217ENST00000532877 XPOTO43592 962 aaKnown RBP15.43■□□□□ 0.06
COL16A1-217ENST00000532877 UPP2O95045 317 aa15.43■□□□□ 0.06
COL16A1-217ENST00000532877 VNN1O95497 513 aa15.43■□□□□ 0.06
COL16A1-217ENST00000532877 POMCP01189 267 aa15.43■□□□□ 0.06
COL16A1-217ENST00000532877 THP07101 528 aa15.43■□□□□ 0.06
COL16A1-217ENST00000532877 ZNF75DP51815 510 aa15.43■□□□□ 0.06
COL16A1-217ENST00000532877 SOX4Q06945 474 aaPredicted RBP15.43■□□□□ 0.06
COL16A1-217ENST00000532877 NAB2Q15742 525 aa15.43■□□□□ 0.06
COL16A1-217ENST00000532877 PTPN21Q16825 1174 aa15.43■□□□□ 0.06
COL16A1-217ENST00000532877 EPC2Q52LR7 807 aa15.43■□□□□ 0.06
COL16A1-217ENST00000532877 NOMO2Q5JPE7 1267 aa15.43■□□□□ 0.06
COL16A1-217ENST00000532877 TRAPPC11Q7Z392 1133 aa15.43■□□□□ 0.06
COL16A1-217ENST00000532877 TMCO2Q7Z6W1 182 aaPredicted RBP15.43■□□□□ 0.06
COL16A1-217ENST00000532877 ABI1Q8IZP0 508 aa15.43■□□□□ 0.06
COL16A1-217ENST00000532877 BEST2Q8NFU1 509 aa15.43■□□□□ 0.06
COL16A1-217ENST00000532877 TAS1R2Q8TE23 839 aa15.43■□□□□ 0.06
COL16A1-217ENST00000532877 CASD1Q96PB1 797 aa15.43■□□□□ 0.06
COL16A1-217ENST00000532877 ERGIC2Q96RQ1 377 aa15.43■□□□□ 0.06
COL16A1-217ENST00000532877 CRACR2AQ9BSW2 395 aa15.43■□□□□ 0.06
COL16A1-217ENST00000532877 SLC38A7Q9NVC3 462 aa15.43■□□□□ 0.06
COL16A1-217ENST00000532877 DPP3Q9NY33 737 aa15.43■□□□□ 0.06
COL16A1-217ENST00000532877 GCNT4Q9P109 453 aa15.43■□□□□ 0.06
COL16A1-217ENST00000532877 SIX4Q9UIU6 781 aa15.43■□□□□ 0.06
COL16A1-217ENST00000532877 ITGA11Q9UKX5 1188 aa15.43■□□□□ 0.06
COL16A1-217ENST00000532877 COQ4Q9Y3A0 265 aa15.43■□□□□ 0.06
COL16A1-217ENST00000532877 TCF20Q9UGU0 1960 aaKnown RBP15.43■□□□□ 0.06
COL16A1-217ENST00000532877 PHACTR2O75167 634 aa15.42■□□□□ 0.06
COL16A1-217ENST00000532877 DGKIO75912 1065 aa15.42■□□□□ 0.06
COL16A1-217ENST00000532877 HLA-DRAP01903 254 aa15.42■□□□□ 0.06
COL16A1-217ENST00000532877 ITGB3P05106 788 aa15.42■□□□□ 0.06
COL16A1-217ENST00000532877 CYP3A5P20815 502 aa15.42■□□□□ 0.06
COL16A1-217ENST00000532877 HOXD11P31277 338 aaPredicted RBP15.42■□□□□ 0.06
COL16A1-217ENST00000532877 PIK3CAP42336 1068 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms