RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 RGS7P49802 495 aa11.94□□□□□ -0.5
PTPRK-221ENST00000532331 PAPOLAP51003 745 aaKnown RBP11.94□□□□□ -0.5
PTPRK-221ENST00000532331 ARL4CP56559 192 aa11.94□□□□□ -0.5
PTPRK-221ENST00000532331 MAP2K5Q13163 448 aa11.94□□□□□ -0.5
PTPRK-221ENST00000532331 DGKZQ13574 1117 aa11.94□□□□□ -0.5
PTPRK-221ENST00000532331 ITPRIPL1Q6GPH6 555 aa11.94□□□□□ -0.5
PTPRK-221ENST00000532331 EMBQ6PCB8 327 aa11.94□□□□□ -0.5
PTPRK-221ENST00000532331 SHC4Q6S5L8 630 aa11.94□□□□□ -0.5
PTPRK-221ENST00000532331 SRRM1Q8IYB3 904 aaKnown RBP11.94□□□□□ -0.5
PTPRK-221ENST00000532331 OSMRQ99650 979 aa11.94□□□□□ -0.5
PTPRK-221ENST00000532331 MUC3BQ9H195 1237 aa11.94□□□□□ -0.5
PTPRK-221ENST00000532331 PARVAQ9NVD7 372 aa11.94□□□□□ -0.5
PTPRK-221ENST00000532331 PIK3R2O00459 728 aa11.94□□□□□ -0.5
PTPRK-221ENST00000532331 EIF3DO15371 548 aaKnown RBP eCLIP11.94□□□□□ -0.5
PTPRK-221ENST00000532331 THP07101 528 aa11.94□□□□□ -0.5
PTPRK-221ENST00000532331 ADCYAP1R1P41586 468 aa11.94□□□□□ -0.5
PTPRK-221ENST00000532331 TPI1P60174 286 aa11.94□□□□□ -0.5
PTPRK-221ENST00000532331 GFPT1Q06210 699 aaPredicted RBP11.94□□□□□ -0.5
PTPRK-221ENST00000532331 NUP85Q9BW27 656 aa11.94□□□□□ -0.5
PTPRK-221ENST00000532331 SUDS3Q9H7L9 328 aaPredicted RBP11.94□□□□□ -0.5
PTPRK-221ENST00000532331 NOVA2Q9UNW9 492 aaKnown RBP11.94□□□□□ -0.5
PTPRK-221ENST00000532331 ANO9A1A5B4 782 aa11.94□□□□□ -0.5
PTPRK-221ENST00000532331 INSRRP14616 1297 aa11.94□□□□□ -0.5
PTPRK-221ENST00000532331 ACADSBP45954 432 aa11.94□□□□□ -0.5
PTPRK-221ENST00000532331 CTXN3Q4LDR2 81 aa11.94□□□□□ -0.5
PTPRK-221ENST00000532331 ZC2HC1CQ53FD0 456 aaPredicted RBP11.94□□□□□ -0.5
PTPRK-221ENST00000532331 C10orf120Q5SQS8 335 aa11.94□□□□□ -0.5
PTPRK-221ENST00000532331 SLC30A10Q6XR72 485 aa11.94□□□□□ -0.5
PTPRK-221ENST00000532331 ZNF564Q8TBZ8 553 aaPredicted RBP11.94□□□□□ -0.5
PTPRK-221ENST00000532331 C18orf8Q96DM3 657 aa11.94□□□□□ -0.5
PTPRK-221ENST00000532331 EPS15L1Q9UBC2 864 aa11.94□□□□□ -0.5
PTPRK-221ENST00000532331 NAGPAQ9UK23 515 aa11.94□□□□□ -0.5
PTPRK-221ENST00000532331 PITPNM2Q9BZ72 1349 aa11.94□□□□□ -0.5
PTPRK-221ENST00000532331 AP1B1Q10567 949 aa11.94□□□□□ -0.5
PTPRK-221ENST00000532331 ATP8B4Q8TF62 1192 aa11.94□□□□□ -0.5
PTPRK-221ENST00000532331 FAM49BQ9NUQ9 324 aa11.94□□□□□ -0.5
PTPRK-221ENST00000532331 GHRP10912 638 aa11.94□□□□□ -0.5
PTPRK-221ENST00000532331 ZFXP17010 805 aaPredicted RBP11.94□□□□□ -0.5
PTPRK-221ENST00000532331 DNAJB2P25686 324 aa11.94□□□□□ -0.5
PTPRK-221ENST00000532331 HEATR6Q6AI08 1181 aaKnown RBP11.94□□□□□ -0.5
PTPRK-221ENST00000532331 RMDN1Q96DB5 314 aa11.94□□□□□ -0.5
PTPRK-221ENST00000532331 ZNF541Q9H0D2 1346 aa11.94□□□□□ -0.5
PTPRK-221ENST00000532331 KIF3CO14782 793 aa11.93□□□□□ -0.5
PTPRK-221ENST00000532331 ITGB3P05106 788 aa11.93□□□□□ -0.5
PTPRK-221ENST00000532331 SLC8A1P32418 973 aa11.93□□□□□ -0.5
PTPRK-221ENST00000532331 IFT88Q13099 833 aa11.93□□□□□ -0.5
PTPRK-221ENST00000532331 TAF1BQ53T94 588 aaPredicted RBP11.93□□□□□ -0.5
PTPRK-221ENST00000532331 GPR142Q7Z601 462 aa11.93□□□□□ -0.5
PTPRK-221ENST00000532331 EMILIN2Q9BXX0 1053 aa11.93□□□□□ -0.5
PTPRK-221ENST00000532331 MRPL9Q9BYD2 267 aaKnown RBP11.93□□□□□ -0.5
PTPRK-221ENST00000532331 TBX20Q9UMR3 447 aa11.93□□□□□ -0.5
PTPRK-221ENST00000532331 NFU1Q9UMS0 254 aa11.93□□□□□ -0.5
PTPRK-221ENST00000532331 FIS1Q9Y3D6 152 aa11.93□□□□□ -0.5
PTPRK-221ENST00000532331 KRT37O76014 449 aa11.93□□□□□ -0.5
PTPRK-221ENST00000532331 FAM200BP0CF97 657 aa11.93□□□□□ -0.5
PTPRK-221ENST00000532331 HSPA8P11142 646 aaKnown RBP11.93□□□□□ -0.5
PTPRK-221ENST00000532331 MUTP22033 750 aa11.93□□□□□ -0.5
PTPRK-221ENST00000532331 EPHB3P54753 998 aa11.93□□□□□ -0.5
PTPRK-221ENST00000532331 SESN3P58005 492 aa11.93□□□□□ -0.5
PTPRK-221ENST00000532331 BEX3Q00994 111 aa11.93□□□□□ -0.5
PTPRK-221ENST00000532331 TUBB6Q9BUF5 446 aa11.93□□□□□ -0.5
PTPRK-221ENST00000532331 HEMGNQ9BXL5 484 aa11.93□□□□□ -0.5
PTPRK-221ENST00000532331 SAYSD1Q9NPB0 183 aa11.93□□□□□ -0.5
PTPRK-221ENST00000532331 DDX56Q9NY93 547 aaKnown RBP11.93□□□□□ -0.5
PTPRK-221ENST00000532331 FTLP02792 175 aaPredicted RBP11.93□□□□□ -0.5
PTPRK-221ENST00000532331 PRKAR2AP13861 404 aaKnown RBP11.93□□□□□ -0.5
PTPRK-221ENST00000532331 LIG3P49916 1009 aa11.93□□□□□ -0.5
PTPRK-221ENST00000532331 SLC12A1Q13621 1099 aa11.93□□□□□ -0.5
PTPRK-221ENST00000532331 ATG16L1Q676U5 607 aa11.93□□□□□ -0.5
PTPRK-221ENST00000532331 MPZL3Q6UWV2 235 aa11.93□□□□□ -0.5
PTPRK-221ENST00000532331 GBP5Q96PP8 586 aa11.93□□□□□ -0.5
PTPRK-221ENST00000532331 DSEQ9UL01 958 aa11.93□□□□□ -0.5
PTPRK-221ENST00000532331 MYMKA6NI61 221 aa11.93□□□□□ -0.5
PTPRK-221ENST00000532331 CYP26A1O43174 497 aa11.93□□□□□ -0.5
PTPRK-221ENST00000532331 ACSL3O95573 720 aa11.93□□□□□ -0.5
PTPRK-221ENST00000532331 ASMTLO95671 621 aa11.93□□□□□ -0.5
PTPRK-221ENST00000532331 CHEK2O96017 543 aa11.93□□□□□ -0.5
PTPRK-221ENST00000532331 BCAR1P56945 870 aa11.93□□□□□ -0.5
PTPRK-221ENST00000532331 SFSWAPQ12872 951 aaKnown RBP11.93□□□□□ -0.5
PTPRK-221ENST00000532331 GBP7Q8N8V2 638 aaPredicted RBP11.93□□□□□ -0.5
PTPRK-221ENST00000532331 HPS3Q969F9 1004 aa11.93□□□□□ -0.5
PTPRK-221ENST00000532331 KIFC3Q9BVG8 833 aa11.93□□□□□ -0.5
PTPRK-221ENST00000532331 PPME1Q9Y570 386 aa11.93□□□□□ -0.5
PTPRK-221ENST00000532331 ADGRB2O60241 1585 aa11.93□□□□□ -0.5
PTPRK-221ENST00000532331 OGTO15294 1046 aa11.92□□□□□ -0.5
PTPRK-221ENST00000532331 CNTN2Q02246 1040 aa11.92□□□□□ -0.5
PTPRK-221ENST00000532331 CAV1Q03135 178 aa11.92□□□□□ -0.5
PTPRK-221ENST00000532331 CRY2Q49AN0 593 aa11.92□□□□□ -0.5
PTPRK-221ENST00000532331 ZNF280DQ6N043 979 aa11.92□□□□□ -0.5
PTPRK-221ENST00000532331 FRA10AC1Q70Z53 315 aa11.92□□□□□ -0.5
PTPRK-221ENST00000532331 MORC4Q8TE76 937 aa11.92□□□□□ -0.5
PTPRK-221ENST00000532331 UCMAQ8WVF2 138 aa11.92□□□□□ -0.5
PTPRK-221ENST00000532331 TMEM60Q9H2L4 133 aa11.92□□□□□ -0.5
PTPRK-221ENST00000532331 DNAJC17Q9NVM6 304 aaKnown RBP11.92□□□□□ -0.5
PTPRK-221ENST00000532331 WDR35Q9P2L0 1181 aa11.92□□□□□ -0.5
PTPRK-221ENST00000532331 A0A087WZ62 844 aa11.92□□□□□ -0.5
PTPRK-221ENST00000532331 NVLO15381 856 aaKnown RBP11.92□□□□□ -0.5
PTPRK-221ENST00000532331 TBC1D12O60347 775 aa11.92□□□□□ -0.5
PTPRK-221ENST00000532331 HLA-DRAP01903 254 aa11.92□□□□□ -0.5
PTPRK-221ENST00000532331 KLRC2P26717 231 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms