RNA–Protein interactions for RNA: ENST00000531516.1

C11orf54-210, Transcript of chromosome 11 open reading frame 54, humanhuman

TSL 3

Gene C11orf54, Length 168 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C11orf54-210ENST00000531516 KANK3Q6NY19 840 aa13.69□□□□□ -0.22
C11orf54-210ENST00000531516 BMP8AQ7Z5Y6 402 aa13.69□□□□□ -0.22
C11orf54-210ENST00000531516 USP37Q86T82 979 aa13.69□□□□□ -0.22
C11orf54-210ENST00000531516 MAP4K3Q8IVH8 894 aa13.69□□□□□ -0.22
C11orf54-210ENST00000531516 CCDC65Q8IXS2 484 aa13.69□□□□□ -0.22
C11orf54-210ENST00000531516 SYCP3Q8IZU3 236 aa13.69□□□□□ -0.22
C11orf54-210ENST00000531516 BEST2Q8NFU1 509 aa13.69□□□□□ -0.22
C11orf54-210ENST00000531516 KCNG4Q8TDN1 519 aa13.69□□□□□ -0.22
C11orf54-210ENST00000531516 FAM212AQ96EL1 285 aa13.69□□□□□ -0.22
C11orf54-210ENST00000531516 PRRX2Q99811 253 aa13.69□□□□□ -0.22
C11orf54-210ENST00000531516 PYM1Q9BRP8 204 aaKnown RBP13.69□□□□□ -0.22
C11orf54-210ENST00000531516 OXCT2Q9BYC2 517 aaPredicted RBP13.69□□□□□ -0.22
C11orf54-210ENST00000531516 CUEDC2Q9H467 287 aa13.69□□□□□ -0.22
C11orf54-210ENST00000531516 ST6GALNAC4Q9H4F1 302 aa13.69□□□□□ -0.22
C11orf54-210ENST00000531516 GOLGA2P5Q9HBQ8 144 aa13.69□□□□□ -0.22
C11orf54-210ENST00000531516 C11orf16Q9NQ32 467 aa13.69□□□□□ -0.22
C11orf54-210ENST00000531516 MTRRQ9UBK8 725 aa13.69□□□□□ -0.22
C11orf54-210ENST00000531516 LIMD1Q9UGP4 676 aa13.69□□□□□ -0.22
C11orf54-210ENST00000531516 POLIQ9UNA4 740 aa13.69□□□□□ -0.22
C11orf54-210ENST00000531516 ZFP37Q9Y6Q3 630 aaPredicted RBP13.69□□□□□ -0.22
C11orf54-210ENST00000531516 CLUHO75153 1309 aa13.68□□□□□ -0.22
C11orf54-210ENST00000531516 TULP1O00294 542 aaPredicted RBP13.68□□□□□ -0.22
C11orf54-210ENST00000531516 ABLIM1O14639 778 aa13.68□□□□□ -0.22
C11orf54-210ENST00000531516 PRRG1O14668 218 aa13.68□□□□□ -0.22
C11orf54-210ENST00000531516 RFPL2O75678 378 aa13.68□□□□□ -0.22
C11orf54-210ENST00000531516 C8AP07357 584 aa13.68□□□□□ -0.22
C11orf54-210ENST00000531516 ZSCAN22P10073 491 aaPredicted RBP13.68□□□□□ -0.22
C11orf54-210ENST00000531516 CXCL8P10145 99 aa13.68□□□□□ -0.22
C11orf54-210ENST00000531516 MYBP10242 640 aa13.68□□□□□ -0.22
C11orf54-210ENST00000531516 NMT1P30419 496 aaKnown RBP13.68□□□□□ -0.22
C11orf54-210ENST00000531516 ZNF280DQ6N043 979 aa13.68□□□□□ -0.22
C11orf54-210ENST00000531516 LILRA6Q6PI73 481 aa13.68□□□□□ -0.22
C11orf54-210ENST00000531516 IQUBQ8NA54 791 aa13.68□□□□□ -0.22
C11orf54-210ENST00000531516 LINC00301Q8NCQ3 95 aa13.68□□□□□ -0.22
C11orf54-210ENST00000531516 POMGNT1Q8WZA1 660 aa13.68□□□□□ -0.22
C11orf54-210ENST00000531516 NXPE3Q969Y0 559 aa13.68□□□□□ -0.22
C11orf54-210ENST00000531516 ACCSQ96QU6 501 aa13.68□□□□□ -0.22
C11orf54-210ENST00000531516 CLSTN3Q9BQT9 956 aa13.68□□□□□ -0.22
C11orf54-210ENST00000531516 PANK2Q9BZ23 570 aa13.68□□□□□ -0.22
C11orf54-210ENST00000531516 FAM13BQ9NYF5 915 aa13.68□□□□□ -0.22
C11orf54-210ENST00000531516 IGSF9Q9P2J2 1179 aa13.68□□□□□ -0.22
C11orf54-210ENST00000531516 FBXW11Q9UKB1 542 aa13.68□□□□□ -0.22
C11orf54-210ENST00000531516 CDY1Q9Y6F8 540 aa13.68□□□□□ -0.22
C11orf54-210ENST00000531516 ATG2AQ2TAZ0 1938 aa13.67□□□□□ -0.22
C11orf54-210ENST00000531516 A0A0B4J269 797 aa13.67□□□□□ -0.22
C11orf54-210ENST00000531516 CUTAO60888 179 aa13.67□□□□□ -0.22
C11orf54-210ENST00000531516 GCNT3O95395 438 aa13.67□□□□□ -0.22
C11orf54-210ENST00000531516 LRG1P02750 347 aa13.67□□□□□ -0.22
C11orf54-210ENST00000531516 TKTP29401 623 aaKnown RBP13.67□□□□□ -0.22
C11orf54-210ENST00000531516 BRCC3P46736 316 aa13.67□□□□□ -0.22
C11orf54-210ENST00000531516 ME1P48163 572 aa13.67□□□□□ -0.22
C11orf54-210ENST00000531516 POU5F1Q01860 360 aaKnown RBP13.67□□□□□ -0.22
C11orf54-210ENST00000531516 SEZ6Q53EL9 994 aa13.67□□□□□ -0.22
C11orf54-210ENST00000531516 AXDND1Q5T1B0 1012 aaPredicted RBP13.67□□□□□ -0.22
C11orf54-210ENST00000531516 DSTYKQ6XUX3 929 aa13.67□□□□□ -0.22
C11orf54-210ENST00000531516 HFE2Q6ZVN8 426 aa13.67□□□□□ -0.22
C11orf54-210ENST00000531516 USP49Q70CQ1 688 aa13.67□□□□□ -0.22
C11orf54-210ENST00000531516 ZNF720Q7Z2F6 126 aa13.67□□□□□ -0.22
C11orf54-210ENST00000531516 SFR1Q86XK3 245 aa13.67□□□□□ -0.22
C11orf54-210ENST00000531516 ELMOD1Q8N336 334 aa13.67□□□□□ -0.22
C11orf54-210ENST00000531516 PDILTQ8N807 584 aa13.67□□□□□ -0.22
C11orf54-210ENST00000531516 C18orf25Q96B23 403 aaPredicted RBP13.67□□□□□ -0.22
C11orf54-210ENST00000531516 ZMAT2Q96NC0 199 aaKnown RBP13.67□□□□□ -0.22
C11orf54-210ENST00000531516 CXCL16Q9H2A7 254 aa13.67□□□□□ -0.22
C11orf54-210ENST00000531516 TNMDQ9H2S6 317 aa13.67□□□□□ -0.22
C11orf54-210ENST00000531516 MFSD1Q9H3U5 465 aa13.67□□□□□ -0.22
C11orf54-210ENST00000531516 ASB7Q9H672 318 aa13.67□□□□□ -0.22
C11orf54-210ENST00000531516 TMEM206Q9H813 350 aa13.67□□□□□ -0.22
C11orf54-210ENST00000531516 TFIP11Q9UBB9 837 aaKnown RBP13.67□□□□□ -0.22
C11orf54-210ENST00000531516 CDH22Q9UJ99 828 aa13.67□□□□□ -0.22
C11orf54-210ENST00000531516 AGO2Q9UKV8 859 aaKnown RBP13.67□□□□□ -0.22
C11orf54-210ENST00000531516 MAFFQ9ULX9 164 aa13.67□□□□□ -0.22
C11orf54-210ENST00000531516 DERAQ9Y315 318 aa13.67□□□□□ -0.22
C11orf54-210ENST00000531516 R3HCC1Q9Y3T6 440 aaKnown RBP13.67□□□□□ -0.22
C11orf54-210ENST00000531516 TTC26A0AVF1 554 aa13.66□□□□□ -0.22
C11orf54-210ENST00000531516 LACTBL1A8MY62 500 aa13.66□□□□□ -0.22
C11orf54-210ENST00000531516 I3L4J1 428 aa13.66□□□□□ -0.22
C11orf54-210ENST00000531516 LDHAP00338 332 aaKnown RBP13.66□□□□□ -0.22
C11orf54-210ENST00000531516 RFX1P22670 979 aa13.66□□□□□ -0.22
C11orf54-210ENST00000531516 FSHRP23945 695 aa13.66□□□□□ -0.22
C11orf54-210ENST00000531516 ARPP19P56211 112 aa13.66□□□□□ -0.22
C11orf54-210ENST00000531516 SOX4Q06945 474 aaPredicted RBP13.66□□□□□ -0.22
C11orf54-210ENST00000531516 TDGQ13569 410 aa13.66□□□□□ -0.22
C11orf54-210ENST00000531516 TMEM132DQ14C87 1099 aa13.66□□□□□ -0.22
C11orf54-210ENST00000531516 CTXN3Q4LDR2 81 aa13.66□□□□□ -0.22
C11orf54-210ENST00000531516 VARS2Q5ST30 1063 aaKnown RBP13.66□□□□□ -0.22
C11orf54-210ENST00000531516 FOXD4L5Q5VV16 416 aaPredicted RBP13.66□□□□□ -0.22
C11orf54-210ENST00000531516 TPGS2Q68CL5 300 aa13.66□□□□□ -0.22
C11orf54-210ENST00000531516 GET4Q7L5D6 327 aaPredicted RBP13.66□□□□□ -0.22
C11orf54-210ENST00000531516 FBXL6Q8N531 539 aa13.66□□□□□ -0.22
C11orf54-210ENST00000531516 ZNF461Q8TAF7 563 aa13.66□□□□□ -0.22
C11orf54-210ENST00000531516 SLC7A14Q8TBB6 771 aa13.66□□□□□ -0.22
C11orf54-210ENST00000531516 FOXD4L4Q8WXT5 416 aaPredicted RBP13.66□□□□□ -0.22
C11orf54-210ENST00000531516 SUSD3Q96L08 255 aa13.66□□□□□ -0.22
C11orf54-210ENST00000531516 MAGEF1Q9HAY2 307 aa13.66□□□□□ -0.22
C11orf54-210ENST00000531516 OLFML3Q9NRN5 406 aa13.66□□□□□ -0.22
C11orf54-210ENST00000531516 PANK4Q9NVE7 773 aa13.66□□□□□ -0.22
C11orf54-210ENST00000531516 PCDHB8Q9UN66 801 aa13.66□□□□□ -0.22
C11orf54-210ENST00000531516 MYMKA6NI61 221 aa13.65□□□□□ -0.22
C11orf54-210ENST00000531516 IL18RAPO95256 599 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms