RNA–Protein interactions for RNA: ENST00000530983.5

VPS28-213, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 2,337 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-213ENST00000530983 KYNUQ16719 465 aa20.52■□□□□ 0.88
VPS28-213ENST00000530983 MGARPQ8TDB4 240 aa20.52■□□□□ 0.88
VPS28-213ENST00000530983 MAIP1Q8WWC4 291 aa20.52■□□□□ 0.88
VPS28-213ENST00000530983 CEP170P1Q96L14 293 aa20.52■□□□□ 0.88
VPS28-213ENST00000530983 C1orf112Q9NSG2 853 aa20.52■□□□□ 0.88
VPS28-213ENST00000530983 FOXO6A8MYZ6 492 aa20.52■□□□□ 0.87
VPS28-213ENST00000530983 MGRN1O60291 552 aa20.52■□□□□ 0.87
VPS28-213ENST00000530983 GAS8O95995 478 aa20.52■□□□□ 0.87
VPS28-213ENST00000530983 IBSPP21815 317 aaPredicted RBP20.52■□□□□ 0.87
VPS28-213ENST00000530983 KLF1Q13351 362 aaPredicted RBP20.52■□□□□ 0.87
VPS28-213ENST00000530983 SAMD3Q8N6K7 520 aa20.52■□□□□ 0.87
VPS28-213ENST00000530983 GRK7Q8WTQ7 553 aa20.52■□□□□ 0.87
VPS28-213ENST00000530983 PWWP2AQ96N64 755 aa20.52■□□□□ 0.87
VPS28-213ENST00000530983 C17orf75Q9HAS0 396 aa20.52■□□□□ 0.87
VPS28-213ENST00000530983 NEU2Q9Y3R4 380 aa20.52■□□□□ 0.87
VPS28-213ENST00000530983 PCDHB2Q9Y5E7 798 aa20.52■□□□□ 0.87
VPS28-213ENST00000530983 PCDHA10Q9Y5I2 948 aa20.52■□□□□ 0.87
VPS28-213ENST00000530983 CD2APQ9Y5K6 639 aa20.52■□□□□ 0.87
VPS28-213ENST00000530983 UMODL1Q5DID0 1318 aa20.51■□□□□ 0.87
VPS28-213ENST00000530983 STBD1O95210 358 aa20.51■□□□□ 0.87
VPS28-213ENST00000530983 MYBL1P10243 752 aa20.51■□□□□ 0.87
VPS28-213ENST00000530983 CENPCQ03188 943 aa20.51■□□□□ 0.87
VPS28-213ENST00000530983 TAS1R3Q7RTX0 852 aa20.51■□□□□ 0.87
VPS28-213ENST00000530983 N4BP2L2Q92802 583 aaPredicted RBP20.51■□□□□ 0.87
VPS28-213ENST00000530983 TRAIPQ9BWF2 469 aa20.51■□□□□ 0.87
VPS28-213ENST00000530983 DOCK5Q9H7D0 1870 aa20.51■□□□□ 0.87
VPS28-213ENST00000530983 ABCF3Q9NUQ8 709 aa20.51■□□□□ 0.87
VPS28-213ENST00000530983 SBDSQ9Y3A5 250 aaKnown RBP eCLIP20.51■□□□□ 0.87
VPS28-213ENST00000530983 CYP1A1P04798 512 aaPredicted RBP20.5■□□□□ 0.87
VPS28-213ENST00000530983 ATF2P15336 505 aa20.5■□□□□ 0.87
VPS28-213ENST00000530983 GARTP22102 1010 aa20.5■□□□□ 0.87
VPS28-213ENST00000530983 NF2P35240 595 aa20.5■□□□□ 0.87
VPS28-213ENST00000530983 ELF3P78545 371 aaPredicted RBP20.5■□□□□ 0.87
VPS28-213ENST00000530983 BRDTQ58F21 947 aaPredicted RBP20.5■□□□□ 0.87
VPS28-213ENST00000530983 ARHGEF16Q5VV41 709 aa20.5■□□□□ 0.87
VPS28-213ENST00000530983 LMBRD2Q68DH5 695 aaPredicted RBP20.5■□□□□ 0.87
VPS28-213ENST00000530983 MON1BQ7L1V2 547 aa20.5■□□□□ 0.87
VPS28-213ENST00000530983 ZNF677Q86XU0 584 aa20.5■□□□□ 0.87
VPS28-213ENST00000530983 CCDC50Q8IVM0 306 aa20.5■□□□□ 0.87
VPS28-213ENST00000530983 LARGE2Q8N3Y3 721 aa20.5■□□□□ 0.87
VPS28-213ENST00000530983 MTMR14Q8NCE2 650 aa20.5■□□□□ 0.87
VPS28-213ENST00000530983 ATL2Q8NHH9 583 aa20.5■□□□□ 0.87
VPS28-213ENST00000530983 DYDC1Q8WWB3 177 aa20.5■□□□□ 0.87
VPS28-213ENST00000530983 HEMGNQ9BXL5 484 aa20.5■□□□□ 0.87
VPS28-213ENST00000530983 KIAA1683Q9H0B3 1180 aa20.5■□□□□ 0.87
VPS28-213ENST00000530983 NINJ2Q9NZG7 142 aa20.5■□□□□ 0.87
VPS28-213ENST00000530983 GABBR1Q9UBS5 961 aa20.5■□□□□ 0.87
VPS28-213ENST00000530983 RALAP11233 206 aa20.5■□□□□ 0.87
VPS28-213ENST00000530983 ADCY8P40145 1251 aa20.5■□□□□ 0.87
VPS28-213ENST00000530983 VPS41P49754 854 aa20.5■□□□□ 0.87
VPS28-213ENST00000530983 ENPEPQ07075 957 aa20.5■□□□□ 0.87
VPS28-213ENST00000530983 CEP57Q86XR8 500 aa20.5■□□□□ 0.87
VPS28-213ENST00000530983 RDM1Q8NG50 284 aa20.5■□□□□ 0.87
VPS28-213ENST00000530983 TRIM11Q96F44 468 aa20.5■□□□□ 0.87
VPS28-213ENST00000530983 ZNF277Q9NRM2 450 aaPredicted RBP20.5■□□□□ 0.87
VPS28-213ENST00000530983 FGFR1OP2Q9NVK5 253 aa20.5■□□□□ 0.87
VPS28-213ENST00000530983 ANAPC5Q9UJX4 755 aa20.5■□□□□ 0.87
VPS28-213ENST00000530983 TCP11X1B4DZS4 312 aa20.49■□□□□ 0.87
VPS28-213ENST00000530983 THAP12O43422 761 aa20.49■□□□□ 0.87
VPS28-213ENST00000530983 SORBS3O60504 671 aa20.49■□□□□ 0.87
VPS28-213ENST00000530983 PROSCO94903 275 aa20.49■□□□□ 0.87
VPS28-213ENST00000530983 ATP5DP30049 168 aa20.49■□□□□ 0.87
VPS28-213ENST00000530983 NSFP46459 744 aaKnown RBP20.49■□□□□ 0.87
VPS28-213ENST00000530983 CAV1Q03135 178 aa20.49■□□□□ 0.87
VPS28-213ENST00000530983 PTP4A2Q12974 167 aa20.49■□□□□ 0.87
VPS28-213ENST00000530983 NBPF9Q3BBW0 867 aa20.49■□□□□ 0.87
VPS28-213ENST00000530983 FAM133BQ5BKY9 247 aaKnown RBP20.49■□□□□ 0.87
VPS28-213ENST00000530983 XPNPEP1Q9NQW7 623 aa20.49■□□□□ 0.87
VPS28-213ENST00000530983 PDLIM7Q9NR12 457 aa20.49■□□□□ 0.87
VPS28-213ENST00000530983 TELO2Q9Y4R8 837 aa20.49■□□□□ 0.87
VPS28-213ENST00000530983 TCEA3O75764 348 aa20.49■□□□□ 0.87
VPS28-213ENST00000530983 CFHP08603 1231 aa20.49■□□□□ 0.87
VPS28-213ENST00000530983 WNT7BP56706 349 aa20.49■□□□□ 0.87
VPS28-213ENST00000530983 CLDN10P78369 228 aa20.49■□□□□ 0.87
VPS28-213ENST00000530983 MPP2Q14168 576 aa20.49■□□□□ 0.87
VPS28-213ENST00000530983 HIBCHQ6NVY1 386 aaPredicted RBP20.49■□□□□ 0.87
VPS28-213ENST00000530983 DHX30Q7L2E3 1194 aaKnown RBP eCLIP20.49■□□□□ 0.87
VPS28-213ENST00000530983 MAGEC3Q8TD91 643 aa20.49■□□□□ 0.87
VPS28-213ENST00000530983 BICD1Q96G01 975 aa20.49■□□□□ 0.87
VPS28-213ENST00000530983 FAM118BQ9BPY3 351 aa20.49■□□□□ 0.87
VPS28-213ENST00000530983 SENP7Q9BQF6 1050 aa20.49■□□□□ 0.87
VPS28-213ENST00000530983 MLXIPLQ9NP71 852 aa20.49■□□□□ 0.87
VPS28-213ENST00000530983 CETPP11597 493 aa20.48■□□□□ 0.87
VPS28-213ENST00000530983 NLRX1Q86UT6 975 aa20.48■□□□□ 0.87
VPS28-213ENST00000530983 CYP4X1Q8N118 509 aa20.48■□□□□ 0.87
VPS28-213ENST00000530983 SCLT1Q96NL6 688 aa20.48■□□□□ 0.87
VPS28-213ENST00000530983 ARHGAP28Q9P2N2 729 aa20.48■□□□□ 0.87
VPS28-213ENST00000530983 AGAP1Q9UPQ3 857 aa20.48■□□□□ 0.87
VPS28-213ENST00000530983 USP15Q9Y4E8 981 aaPredicted RBP20.48■□□□□ 0.87
VPS28-213ENST00000530983 PARP14Q460N5 1801 aa20.48■□□□□ 0.87
VPS28-213ENST00000530983 WNT10BO00744 389 aa20.48■□□□□ 0.87
VPS28-213ENST00000530983 GH1P01241 217 aa20.48■□□□□ 0.87
VPS28-213ENST00000530983 TAS2R40P59535 323 aa20.48■□□□□ 0.87
VPS28-213ENST00000530983 ZACNQ401N2 412 aa20.48■□□□□ 0.87
VPS28-213ENST00000530983 ZNF772Q68DY9 489 aaPredicted RBP20.48■□□□□ 0.87
VPS28-213ENST00000530983 SPOPLQ6IQ16 392 aa20.48■□□□□ 0.87
VPS28-213ENST00000530983 ANKRD42Q8N9B4 389 aa20.48■□□□□ 0.87
VPS28-213ENST00000530983 ZBED3Q96IU2 234 aaPredicted RBP20.48■□□□□ 0.87
VPS28-213ENST00000530983 KCNK9Q9NPC2 374 aa20.48■□□□□ 0.87
VPS28-213ENST00000530983 HLA-DRAP01903 254 aa20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms