RNA–Protein interactions for RNA: ENST00000529288.1

CPSF1-204, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 2

Gene CPSF1, Length 588 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-204ENST00000529288 PROZP22891 400 aa14.2□□□□□ -0.14
CPSF1-204ENST00000529288 MARCKSP29966 332 aaPredicted RBP14.2□□□□□ -0.14
CPSF1-204ENST00000529288 HOXA9P31269 272 aa14.2□□□□□ -0.14
CPSF1-204ENST00000529288 UBA7P41226 1012 aa14.2□□□□□ -0.14
CPSF1-204ENST00000529288 SLC12A3P55017 1021 aa14.2□□□□□ -0.14
CPSF1-204ENST00000529288 ROR1Q01973 937 aa14.2□□□□□ -0.14
CPSF1-204ENST00000529288 NOLC1Q14978 699 aaKnown RBP eCLIP14.2□□□□□ -0.14
CPSF1-204ENST00000529288 CTXN3Q4LDR2 81 aa14.2□□□□□ -0.14
CPSF1-204ENST00000529288 XKR4Q5GH76 650 aa14.2□□□□□ -0.14
CPSF1-204ENST00000529288 HYIQ5T013 277 aa14.2□□□□□ -0.14
CPSF1-204ENST00000529288 MTSS1LQ765P7 747 aa14.2□□□□□ -0.14
CPSF1-204ENST00000529288 ASCL5Q7RTU5 278 aa14.2□□□□□ -0.14
CPSF1-204ENST00000529288 GPBP1Q86WP2 473 aa14.2□□□□□ -0.14
CPSF1-204ENST00000529288 TMEM130Q8N3G9 435 aa14.2□□□□□ -0.14
CPSF1-204ENST00000529288 TMEM161BQ8NDZ6 487 aa14.2□□□□□ -0.14
CPSF1-204ENST00000529288 SPIRE2Q8WWL2 714 aa14.2□□□□□ -0.14
CPSF1-204ENST00000529288 CALML4Q96GE6 196 aa14.2□□□□□ -0.14
CPSF1-204ENST00000529288 KXD1Q9BQD3 176 aa14.2□□□□□ -0.14
CPSF1-204ENST00000529288 CYP4F11Q9HBI6 524 aa14.2□□□□□ -0.14
CPSF1-204ENST00000529288 CNTN3Q9P232 1028 aa14.2□□□□□ -0.14
CPSF1-204ENST00000529288 DENND4AQ7Z401 1863 aa14.2□□□□□ -0.14
CPSF1-204ENST00000529288 C2orf16Q68DN1 1984 aa14.2□□□□□ -0.14
CPSF1-204ENST00000529288 ABLIM1O14639 778 aa14.19□□□□□ -0.14
CPSF1-204ENST00000529288 FAM13AO94988 1023 aa14.19□□□□□ -0.14
CPSF1-204ENST00000529288 CXCL8P10145 99 aa14.19□□□□□ -0.14
CPSF1-204ENST00000529288 RPL9P32969 192 aaKnown RBP14.19□□□□□ -0.14
CPSF1-204ENST00000529288 MCM2P49736 904 aa14.19□□□□□ -0.14
CPSF1-204ENST00000529288 LIG4P49917 911 aa14.19□□□□□ -0.14
CPSF1-204ENST00000529288 SNW1Q13573 536 aaKnown RBP14.19□□□□□ -0.14
CPSF1-204ENST00000529288 SLC10A6Q3KNW5 377 aa14.19□□□□□ -0.14
CPSF1-204ENST00000529288 TMEM119Q4V9L6 283 aa14.19□□□□□ -0.14
CPSF1-204ENST00000529288 ARL6IP4Q66PJ3 421 aaKnown RBP14.19□□□□□ -0.14
CPSF1-204ENST00000529288 MYCT1Q8N699 235 aa14.19□□□□□ -0.14
CPSF1-204ENST00000529288 KCNG4Q8TDN1 519 aa14.19□□□□□ -0.14
CPSF1-204ENST00000529288 NKD2Q969F2 451 aaPredicted RBP14.19□□□□□ -0.14
CPSF1-204ENST00000529288 FAM212AQ96EL1 285 aa14.19□□□□□ -0.14
CPSF1-204ENST00000529288 KIF12Q96FN5 646 aa14.19□□□□□ -0.14
CPSF1-204ENST00000529288 TBC1D32Q96NH3 1257 aa14.19□□□□□ -0.14
CPSF1-204ENST00000529288 CORO1BQ9BR76 489 aa14.19□□□□□ -0.14
CPSF1-204ENST00000529288 NTPCRQ9BSD7 190 aaKnown RBP14.19□□□□□ -0.14
CPSF1-204ENST00000529288 FOXQ1Q9C009 403 aa14.19□□□□□ -0.14
CPSF1-204ENST00000529288 LARSQ9P2J5 1176 aaKnown RBP14.19□□□□□ -0.14
CPSF1-204ENST00000529288 TUBGCP4Q9UGJ1 667 aa14.19□□□□□ -0.14
CPSF1-204ENST00000529288 SIT1Q9Y3P8 196 aa14.19□□□□□ -0.14
CPSF1-204ENST00000529288 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.19□□□□□ -0.14
CPSF1-204ENST00000529288 WDR27A2RRH5 827 aa14.18□□□□□ -0.14
CPSF1-204ENST00000529288 SYN3O14994 580 aa14.18□□□□□ -0.14
CPSF1-204ENST00000529288 MEFVO15553 781 aaPredicted RBP14.18□□□□□ -0.14
CPSF1-204ENST00000529288 RHOP08100 348 aa14.18□□□□□ -0.14
CPSF1-204ENST00000529288 PTPN2P17706 415 aa14.18□□□□□ -0.14
CPSF1-204ENST00000529288 NBL1P41271 181 aa14.18□□□□□ -0.14
CPSF1-204ENST00000529288 ARSHQ5FYA8 562 aa14.18□□□□□ -0.14
CPSF1-204ENST00000529288 ZPBP2Q6X784 338 aa14.18□□□□□ -0.14
CPSF1-204ENST00000529288 HAUS6Q7Z4H7 955 aa14.18□□□□□ -0.14
CPSF1-204ENST00000529288 NPAS3Q8IXF0 933 aa14.18□□□□□ -0.14
CPSF1-204ENST00000529288 APPL2Q8NEU8 664 aa14.18□□□□□ -0.14
CPSF1-204ENST00000529288 ZNF461Q8TAF7 563 aa14.18□□□□□ -0.14
CPSF1-204ENST00000529288 REEP2Q9BRK0 252 aa14.18□□□□□ -0.14
CPSF1-204ENST00000529288 SLC2A4RGQ9NR83 387 aa14.18□□□□□ -0.14
CPSF1-204ENST00000529288 FBXL5Q9UKA1 691 aa14.18□□□□□ -0.14
CPSF1-204ENST00000529288 PIEZO1Q92508 2521 aa14.18□□□□□ -0.14
CPSF1-204ENST00000529288 VPS37CA5D8V6 355 aaPredicted RBP14.17□□□□□ -0.14
CPSF1-204ENST00000529288 PRR23AA6NEV1 266 aa14.17□□□□□ -0.14
CPSF1-204ENST00000529288 H0YCG3 227 aa14.17□□□□□ -0.14
CPSF1-204ENST00000529288 K7ENM7 598 aa14.17□□□□□ -0.14
CPSF1-204ENST00000529288 LRRN2O75325 713 aa14.17□□□□□ -0.14
CPSF1-204ENST00000529288 SEC24AO95486 1093 aa14.17□□□□□ -0.14
CPSF1-204ENST00000529288 CLTAP09496 248 aa14.17□□□□□ -0.14
CPSF1-204ENST00000529288 CPB1P15086 417 aa14.17□□□□□ -0.14
CPSF1-204ENST00000529288 CEBPBP17676 345 aa14.17□□□□□ -0.14
CPSF1-204ENST00000529288 TNFSF9P41273 254 aa14.17□□□□□ -0.14
CPSF1-204ENST00000529288 PPP2R3AQ06190 1150 aa14.17□□□□□ -0.14
CPSF1-204ENST00000529288 MCL1Q07820 350 aa14.17□□□□□ -0.14
CPSF1-204ENST00000529288 MCM6Q14566 821 aa14.17□□□□□ -0.14
CPSF1-204ENST00000529288 UBXN2BQ14CS0 331 aa14.17□□□□□ -0.14
CPSF1-204ENST00000529288 KARSQ15046 597 aaKnown RBP14.17□□□□□ -0.14
CPSF1-204ENST00000529288 SLC8B1Q6J4K2 584 aa14.17□□□□□ -0.14
CPSF1-204ENST00000529288 ZNF280DQ6N043 979 aa14.17□□□□□ -0.14
CPSF1-204ENST00000529288 DSTYKQ6XUX3 929 aa14.17□□□□□ -0.14
CPSF1-204ENST00000529288 DDX12PQ92771 950 aa14.17□□□□□ -0.14
CPSF1-204ENST00000529288 SHDQ96IW2 340 aa14.17□□□□□ -0.14
CPSF1-204ENST00000529288 SUSD3Q96L08 255 aa14.17□□□□□ -0.14
CPSF1-204ENST00000529288 HAPLN2Q9GZV7 340 aa14.17□□□□□ -0.14
CPSF1-204ENST00000529288 KCND2Q9NZV8 630 aa14.17□□□□□ -0.14
CPSF1-204ENST00000529288 KCNH3Q9ULD8 1083 aa14.17□□□□□ -0.14
CPSF1-204ENST00000529288 TIMM13Q9Y5L4 95 aaPredicted RBP14.17□□□□□ -0.14
CPSF1-204ENST00000529288 LACTBL1A8MY62 500 aa14.16□□□□□ -0.14
CPSF1-204ENST00000529288 PROB1E7EW31 1015 aa14.16□□□□□ -0.14
CPSF1-204ENST00000529288 HNRNPDLO14979 420 aaKnown RBP14.16□□□□□ -0.14
CPSF1-204ENST00000529288 TBCAO75347 108 aaKnown RBP14.16□□□□□ -0.14
CPSF1-204ENST00000529288 ABLIM3O94929 683 aa14.16□□□□□ -0.14
CPSF1-204ENST00000529288 ATF2P15336 505 aa14.16□□□□□ -0.14
CPSF1-204ENST00000529288 PLCG1P19174 1290 aa14.16□□□□□ -0.14
CPSF1-204ENST00000529288 GUCY2FP51841 1108 aa14.16□□□□□ -0.14
CPSF1-204ENST00000529288 NCKAP1LP55160 1127 aa14.16□□□□□ -0.14
CPSF1-204ENST00000529288 GRIN1Q05586 938 aa14.16□□□□□ -0.14
CPSF1-204ENST00000529288 ADCY1Q08828 1119 aa14.16□□□□□ -0.14
CPSF1-204ENST00000529288 SF3A1Q15459 793 aaKnown RBP14.16□□□□□ -0.14
CPSF1-204ENST00000529288 SLC5A9Q2M3M2 681 aa14.16□□□□□ -0.14
CPSF1-204ENST00000529288 SLC44A4Q53GD3 710 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms