RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 SPTAN1Q13813 2472 aaKnown RBP9.42□□□□□ -0.9
SSBP3-212ENST00000528930 COL4A2P08572 1712 aa9.42□□□□□ -0.9
SSBP3-212ENST00000528930 COL6A6A6NMZ7 2263 aa9.42□□□□□ -0.9
SSBP3-212ENST00000528930 FAM170BA6NMN3 283 aa9.41□□□□□ -0.9
SSBP3-212ENST00000528930 ANHXE9PGG2 379 aa9.41□□□□□ -0.9
SSBP3-212ENST00000528930 J3QKU1 62 aa9.41□□□□□ -0.9
SSBP3-212ENST00000528930 GPR182O15218 404 aa9.41□□□□□ -0.9
SSBP3-212ENST00000528930 LYPLA2O95372 231 aa9.41□□□□□ -0.9
SSBP3-212ENST00000528930 NTRK1P04629 796 aa9.41□□□□□ -0.9
SSBP3-212ENST00000528930 LAG3P18627 525 aa9.41□□□□□ -0.9
SSBP3-212ENST00000528930 EIF4BP23588 611 aaKnown RBP9.41□□□□□ -0.9
SSBP3-212ENST00000528930 GJB2P29033 226 aa9.41□□□□□ -0.9
SSBP3-212ENST00000528930 YWHABP31946 246 aaKnown RBP9.41□□□□□ -0.9
SSBP3-212ENST00000528930 TRAPPC10P48553 1259 aa9.41□□□□□ -0.9
SSBP3-212ENST00000528930 WDR4P57081 412 aaKnown RBP9.41□□□□□ -0.9
SSBP3-212ENST00000528930 CYP4A11Q02928 519 aa9.41□□□□□ -0.9
SSBP3-212ENST00000528930 PRKCQQ04759 706 aa9.41□□□□□ -0.9
SSBP3-212ENST00000528930 ORC2Q13416 577 aaPredicted RBP9.41□□□□□ -0.9
SSBP3-212ENST00000528930 DSC3Q14574 896 aa9.41□□□□□ -0.9
SSBP3-212ENST00000528930 UBXN2BQ14CS0 331 aa9.41□□□□□ -0.9
SSBP3-212ENST00000528930 TTC38Q5R3I4 469 aa9.41□□□□□ -0.9
SSBP3-212ENST00000528930 SPOUT1Q5T280 376 aaKnown RBP9.41□□□□□ -0.9
SSBP3-212ENST00000528930 C15orf39Q6ZRI6 1047 aa9.41□□□□□ -0.9
SSBP3-212ENST00000528930 FAM43BQ6ZT52 329 aaPredicted RBP9.41□□□□□ -0.9
SSBP3-212ENST00000528930 ZNF605Q86T29 641 aa9.41□□□□□ -0.9
SSBP3-212ENST00000528930 TPH2Q8IWU9 490 aa9.41□□□□□ -0.9
SSBP3-212ENST00000528930 KRI1Q8N9T8 703 aaKnown RBP9.41□□□□□ -0.9
SSBP3-212ENST00000528930 ZNF511Q8NB15 262 aa9.41□□□□□ -0.9
SSBP3-212ENST00000528930 IPO9Q96P70 1041 aaKnown RBP9.41□□□□□ -0.9
SSBP3-212ENST00000528930 MAP7D2Q96T17 732 aa9.41□□□□□ -0.9
SSBP3-212ENST00000528930 DHX33Q9H6R0 707 aaKnown RBP9.41□□□□□ -0.9
SSBP3-212ENST00000528930 ZSWIM4Q9H7M6 989 aa9.41□□□□□ -0.9
SSBP3-212ENST00000528930 RGS18Q9NS28 235 aa9.41□□□□□ -0.9
SSBP3-212ENST00000528930 FAM221BA6H8Z2 402 aa9.4□□□□□ -0.9
SSBP3-212ENST00000528930 C9IYK1 514 aa9.4□□□□□ -0.9
SSBP3-212ENST00000528930 SPATA31C1P0DKV0 1188 aa9.4□□□□□ -0.9
SSBP3-212ENST00000528930 DARSP14868 501 aaKnown RBP9.4□□□□□ -0.9
SSBP3-212ENST00000528930 TIMP2P16035 220 aa9.4□□□□□ -0.9
SSBP3-212ENST00000528930 FAM189BP81408 668 aa9.4□□□□□ -0.9
SSBP3-212ENST00000528930 CDC42EP1Q00587 391 aa9.4□□□□□ -0.9
SSBP3-212ENST00000528930 PLCB2Q00722 1185 aa9.4□□□□□ -0.9
SSBP3-212ENST00000528930 KCNH2Q12809 1159 aa9.4□□□□□ -0.9
SSBP3-212ENST00000528930 MTAPQ13126 283 aa9.4□□□□□ -0.9
SSBP3-212ENST00000528930 FZD5Q13467 585 aa9.4□□□□□ -0.9
SSBP3-212ENST00000528930 CUL4AQ13619 759 aa9.4□□□□□ -0.9
SSBP3-212ENST00000528930 HTR4Q13639 388 aa9.4□□□□□ -0.9
SSBP3-212ENST00000528930 MLF2Q15773 248 aaPredicted RBP9.4□□□□□ -0.9
SSBP3-212ENST00000528930 PTPRNQ16849 979 aa9.4□□□□□ -0.9
SSBP3-212ENST00000528930 ODR4Q5SWX8 454 aa9.4□□□□□ -0.9
SSBP3-212ENST00000528930 TMC7Q7Z402 723 aa9.4□□□□□ -0.9
SSBP3-212ENST00000528930 KSR1Q8IVT5 923 aa9.4□□□□□ -0.9
SSBP3-212ENST00000528930 CEP170P1Q96L14 293 aa9.4□□□□□ -0.9
SSBP3-212ENST00000528930 UBL7Q96S82 380 aaPredicted RBP9.4□□□□□ -0.9
SSBP3-212ENST00000528930 ADAM2Q99965 735 aa9.4□□□□□ -0.9
SSBP3-212ENST00000528930 TYW1Q9NV66 732 aaKnown RBP9.4□□□□□ -0.9
SSBP3-212ENST00000528930 SUCLA2Q9P2R7 463 aaPredicted RBP9.4□□□□□ -0.9
SSBP3-212ENST00000528930 KLK13Q9UKR3 277 aa9.4□□□□□ -0.9
SSBP3-212ENST00000528930 PPME1Q9Y570 386 aa9.4□□□□□ -0.9
SSBP3-212ENST00000528930 PCDHB6Q9Y5E3 794 aa9.4□□□□□ -0.9
SSBP3-212ENST00000528930 ARID2Q68CP9 1835 aa9.4□□□□□ -0.91
SSBP3-212ENST00000528930 F5P12259 2224 aa9.39□□□□□ -0.91
SSBP3-212ENST00000528930 A0A087WWV3 80 aa9.39□□□□□ -0.91
SSBP3-212ENST00000528930 A0A087WZ62 844 aa9.39□□□□□ -0.91
SSBP3-212ENST00000528930 HYAL3O43820 417 aaPredicted RBP9.39□□□□□ -0.91
SSBP3-212ENST00000528930 MED24O75448 989 aa9.39□□□□□ -0.91
SSBP3-212ENST00000528930 CSDE1O75534 798 aaKnown RBP9.39□□□□□ -0.91
SSBP3-212ENST00000528930 OR52Z1P0C646 297 aa9.39□□□□□ -0.91
SSBP3-212ENST00000528930 XRCC6P12956 609 aaKnown RBP eCLIP9.39□□□□□ -0.91
SSBP3-212ENST00000528930 CEACAM1P13688 526 aa9.39□□□□□ -0.91
SSBP3-212ENST00000528930 FGFR4P22455 802 aa9.39□□□□□ -0.91
SSBP3-212ENST00000528930 TARSP26639 723 aaKnown RBP9.39□□□□□ -0.91
SSBP3-212ENST00000528930 SARSP49591 514 aaKnown RBP9.39□□□□□ -0.91
SSBP3-212ENST00000528930 DNM2P50570 870 aa9.39□□□□□ -0.91
SSBP3-212ENST00000528930 SNW1Q13573 536 aaKnown RBP9.39□□□□□ -0.91
SSBP3-212ENST00000528930 GNL2Q13823 731 aaKnown RBP9.39□□□□□ -0.91
SSBP3-212ENST00000528930 XKR9Q5GH70 373 aa9.39□□□□□ -0.91
SSBP3-212ENST00000528930 ZBTB41Q5SVQ8 909 aa9.39□□□□□ -0.91
SSBP3-212ENST00000528930 SLC24A5Q71RS6 500 aa9.39□□□□□ -0.91
SSBP3-212ENST00000528930 OTUD6AQ7L8S5 288 aa9.39□□□□□ -0.91
SSBP3-212ENST00000528930 CATSPER3Q86XQ3 398 aa9.39□□□□□ -0.91
SSBP3-212ENST00000528930 RHPN2Q8IUC4 686 aa9.39□□□□□ -0.91
SSBP3-212ENST00000528930 PRR7Q8TB68 274 aa9.39□□□□□ -0.91
SSBP3-212ENST00000528930 SPIRE2Q8WWL2 714 aa9.39□□□□□ -0.91
SSBP3-212ENST00000528930 TMEM143Q96AN5 459 aa9.39□□□□□ -0.91
SSBP3-212ENST00000528930 JPH2Q9BR39 696 aaPredicted RBP9.39□□□□□ -0.91
SSBP3-212ENST00000528930 FDXACB1Q9BRP7 624 aaPredicted RBP9.39□□□□□ -0.91
SSBP3-212ENST00000528930 RHOBTB2Q9BYZ6 727 aa9.39□□□□□ -0.91
SSBP3-212ENST00000528930 CLMPQ9H6B4 373 aa9.39□□□□□ -0.91
SSBP3-212ENST00000528930 IFT122Q9HBG6 1241 aa9.39□□□□□ -0.91
SSBP3-212ENST00000528930 XPNPEP1Q9NQW7 623 aa9.39□□□□□ -0.91
SSBP3-212ENST00000528930 C1orf112Q9NSG2 853 aa9.39□□□□□ -0.91
SSBP3-212ENST00000528930 ANKEF1Q9NU02 776 aa9.39□□□□□ -0.91
SSBP3-212ENST00000528930 NOL7Q9UMY1 257 aaKnown RBP9.39□□□□□ -0.91
SSBP3-212ENST00000528930 SMC3Q9UQE7 1217 aa9.39□□□□□ -0.91
SSBP3-212ENST00000528930 KIF3AQ9Y496 699 aa9.39□□□□□ -0.91
SSBP3-212ENST00000528930 ZSCAN21Q9Y5A6 473 aaPredicted RBP9.39□□□□□ -0.91
SSBP3-212ENST00000528930 IRAK3Q9Y616 596 aa9.39□□□□□ -0.91
SSBP3-212ENST00000528930 LAMA1P25391 3075 aa9.39□□□□□ -0.91
SSBP3-212ENST00000528930 PDCD11Q14690 1871 aaKnown RBP9.38□□□□□ -0.91
SSBP3-212ENST00000528930 CSRP1P21291 193 aaKnown RBP9.38□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms