RNA–Protein interactions for RNA: ENST00000528922.1

CD44-230, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 5

Gene CD44, Length 1,319 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-230ENST00000528922 R3HDM1Q15032 1099 aaKnown RBP6.15□□□□□ -1.43
CD44-230ENST00000528922 C1QL3Q5VWW1 255 aa6.15□□□□□ -1.43
CD44-230ENST00000528922 AFMIDQ63HM1 303 aa6.15□□□□□ -1.43
CD44-230ENST00000528922 DOK3Q7L591 496 aa6.15□□□□□ -1.43
CD44-230ENST00000528922 FAM83AQ86UY5 434 aa6.15□□□□□ -1.43
CD44-230ENST00000528922 NGEFQ8N5V2 710 aa6.15□□□□□ -1.43
CD44-230ENST00000528922 MB21D1Q8N884 522 aa6.15□□□□□ -1.43
CD44-230ENST00000528922 MIEF2Q96C03 454 aa6.15□□□□□ -1.43
CD44-230ENST00000528922 FAM89AQ96GI7 184 aa6.15□□□□□ -1.43
CD44-230ENST00000528922 CCDC136Q96JN2 1154 aa6.15□□□□□ -1.43
CD44-230ENST00000528922 CPPED1Q9BRF8 314 aaPredicted RBP6.15□□□□□ -1.43
CD44-230ENST00000528922 SLC12A5Q9H2X9 1139 aa6.15□□□□□ -1.43
CD44-230ENST00000528922 TDP1Q9NUW8 608 aa6.15□□□□□ -1.43
CD44-230ENST00000528922 TMEM140Q9NV12 185 aa6.15□□□□□ -1.43
CD44-230ENST00000528922 NIPSNAP3AQ9UFN0 247 aaPredicted RBP6.15□□□□□ -1.43
CD44-230ENST00000528922 TCAF1Q9Y4C2 921 aa6.15□□□□□ -1.43
CD44-230ENST00000528922 RNF123Q5XPI4 1314 aa6.15□□□□□ -1.43
CD44-230ENST00000528922 PZPP20742 1482 aa6.15□□□□□ -1.43
CD44-230ENST00000528922 TBKBP1A7MCY6 615 aa6.14□□□□□ -1.43
CD44-230ENST00000528922 SGTAO43765 313 aa6.14□□□□□ -1.43
CD44-230ENST00000528922 MFAP3LO75121 409 aa6.14□□□□□ -1.43
CD44-230ENST00000528922 GPR32O75388 356 aa6.14□□□□□ -1.43
CD44-230ENST00000528922 PARNO95453 639 aaKnown RBP6.14□□□□□ -1.43
CD44-230ENST00000528922 LPOP22079 712 aaPredicted RBP6.14□□□□□ -1.43
CD44-230ENST00000528922 HIBADHP31937 336 aaKnown RBP6.14□□□□□ -1.43
CD44-230ENST00000528922 CYP2C19P33261 490 aa6.14□□□□□ -1.43
CD44-230ENST00000528922 ALDH1A3P47895 512 aa6.14□□□□□ -1.43
CD44-230ENST00000528922 SELENOPP49908 381 aa6.14□□□□□ -1.43
CD44-230ENST00000528922 RABGGTBP53611 331 aa6.14□□□□□ -1.43
CD44-230ENST00000528922 CDSNQ15517 529 aa6.14□□□□□ -1.43
CD44-230ENST00000528922 HS1BP3Q53T59 392 aa6.14□□□□□ -1.43
CD44-230ENST00000528922 FAM102BQ5T8I3 360 aa6.14□□□□□ -1.43
CD44-230ENST00000528922 Q6ZRM9 215 aa6.14□□□□□ -1.43
CD44-230ENST00000528922 EPM2AIP1Q7L775 607 aaPredicted RBP6.14□□□□□ -1.43
CD44-230ENST00000528922 ANKRD35Q8N283 1001 aa6.14□□□□□ -1.43
CD44-230ENST00000528922 OR52N2Q8NGI0 321 aa6.14□□□□□ -1.43
CD44-230ENST00000528922 IFI44Q8TCB0 444 aa6.14□□□□□ -1.43
CD44-230ENST00000528922 NSUN6Q8TEA1 469 aaKnown RBP6.14□□□□□ -1.43
CD44-230ENST00000528922 CASKIN2Q8WXE0 1202 aa6.14□□□□□ -1.43
CD44-230ENST00000528922 HPS3Q969F9 1004 aa6.14□□□□□ -1.43
CD44-230ENST00000528922 TMX3Q96JJ7 454 aa6.14□□□□□ -1.43
CD44-230ENST00000528922 MRGPRX4Q96LA9 322 aa6.14□□□□□ -1.43
CD44-230ENST00000528922 MYOCQ99972 504 aa6.14□□□□□ -1.43
CD44-230ENST00000528922 ANLNQ9NQW6 1124 aa6.14□□□□□ -1.43
CD44-230ENST00000528922 SLC23A1Q9UHI7 598 aa6.14□□□□□ -1.43
CD44-230ENST00000528922 CFAP20Q9Y6A4 193 aaKnown RBP6.14□□□□□ -1.43
CD44-230ENST00000528922 PNPLA7Q6ZV29 1317 aa6.14□□□□□ -1.43
CD44-230ENST00000528922 CDC42BPAQ5VT25 1732 aa6.14□□□□□ -1.43
CD44-230ENST00000528922 MAST1Q9Y2H9 1570 aa6.13□□□□□ -1.43
CD44-230ENST00000528922 CCDC141Q6ZP82 1450 aa6.13□□□□□ -1.43
CD44-230ENST00000528922 PTPRGP23470 1445 aa6.13□□□□□ -1.43
CD44-230ENST00000528922 C9orf84Q5VXU9 1444 aa6.13□□□□□ -1.43
CD44-230ENST00000528922 NUP155O75694 1391 aa6.13□□□□□ -1.43
CD44-230ENST00000528922 B5MCH6 92 aa6.13□□□□□ -1.43
CD44-230ENST00000528922 TCERG1O14776 1098 aaKnown RBP6.13□□□□□ -1.43
CD44-230ENST00000528922 IPO13O94829 963 aaKnown RBP6.13□□□□□ -1.43
CD44-230ENST00000528922 RAP2AP10114 183 aa6.13□□□□□ -1.43
CD44-230ENST00000528922 HSP90B1P14625 803 aaKnown RBP6.13□□□□□ -1.43
CD44-230ENST00000528922 HK1P19367 917 aa6.13□□□□□ -1.43
CD44-230ENST00000528922 SCNN1GP51170 649 aa6.13□□□□□ -1.43
CD44-230ENST00000528922 ADAM17P78536 824 aa6.13□□□□□ -1.43
CD44-230ENST00000528922 ZNF267Q14586 743 aaPredicted RBP6.13□□□□□ -1.43
CD44-230ENST00000528922 BMT2Q1RMZ1 405 aa6.13□□□□□ -1.43
CD44-230ENST00000528922 ATAT1Q5SQI0 421 aa6.13□□□□□ -1.43
CD44-230ENST00000528922 IFIT1BQ5T764 474 aaKnown RBP6.13□□□□□ -1.43
CD44-230ENST00000528922 B3GNT9Q6UX72 402 aa6.13□□□□□ -1.43
CD44-230ENST00000528922 GSPT2Q8IYD1 628 aaKnown RBP6.13□□□□□ -1.43
CD44-230ENST00000528922 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.13□□□□□ -1.43
CD44-230ENST00000528922 ATXN2LQ8WWM7 1075 aaKnown RBP6.13□□□□□ -1.43
CD44-230ENST00000528922 CLPTM1LQ96KA5 538 aa6.13□□□□□ -1.43
CD44-230ENST00000528922 LRGUKQ96M69 825 aa6.13□□□□□ -1.43
CD44-230ENST00000528922 AIFM3Q96NN9 605 aa6.13□□□□□ -1.43
CD44-230ENST00000528922 MRI1Q9BV20 369 aa6.13□□□□□ -1.43
CD44-230ENST00000528922 MOCS1Q9NZB8 636 aa6.13□□□□□ -1.43
CD44-230ENST00000528922 HDAC5Q9UQL6 1122 aa6.13□□□□□ -1.43
CD44-230ENST00000528922 RUVBL1Q9Y265 456 aaKnown RBP6.13□□□□□ -1.43
CD44-230ENST00000528922 ABCA8O94911 1581 aa6.12□□□□□ -1.43
CD44-230ENST00000528922 CCDC144AA2RUR9 1427 aa6.12□□□□□ -1.43
CD44-230ENST00000528922 KLRG2A4D1S0 409 aaPredicted RBP6.12□□□□□ -1.43
CD44-230ENST00000528922 PLSCR1O15162 318 aa6.12□□□□□ -1.43
CD44-230ENST00000528922 AP1G1O43747 822 aa6.12□□□□□ -1.43
CD44-230ENST00000528922 ZNF20P17024 532 aa6.12□□□□□ -1.43
CD44-230ENST00000528922 PTTG1IPP53801 180 aa6.12□□□□□ -1.43
CD44-230ENST00000528922 ZNF280AP59817 542 aaPredicted RBP6.12□□□□□ -1.43
CD44-230ENST00000528922 CTXN1P60606 82 aa6.12□□□□□ -1.43
CD44-230ENST00000528922 GTF2H3Q13889 308 aa6.12□□□□□ -1.43
CD44-230ENST00000528922 LCE1DQ5T752 114 aa6.12□□□□□ -1.43
CD44-230ENST00000528922 OTUD7BQ6GQQ9 843 aa6.12□□□□□ -1.43
CD44-230ENST00000528922 PPP4R3AQ6IN85 833 aa6.12□□□□□ -1.43
CD44-230ENST00000528922 TTC7BQ86TV6 843 aa6.12□□□□□ -1.43
CD44-230ENST00000528922 RSPH3Q86UC2 560 aa6.12□□□□□ -1.43
CD44-230ENST00000528922 FMNL3Q8IVF7 1028 aa6.12□□□□□ -1.43
CD44-230ENST00000528922 PALM2Q8IXS6 379 aa6.12□□□□□ -1.43
CD44-230ENST00000528922 DRC7Q8IY82 874 aa6.12□□□□□ -1.43
CD44-230ENST00000528922 TCEAL8Q8IYN2 117 aa6.12□□□□□ -1.43
CD44-230ENST00000528922 DCBLD1Q8N8Z6 715 aa6.12□□□□□ -1.43
CD44-230ENST00000528922 DVL3Q92997 716 aaPredicted RBP6.12□□□□□ -1.43
CD44-230ENST00000528922 PGBD4Q96DM1 585 aa6.12□□□□□ -1.43
CD44-230ENST00000528922 MVB12AQ96EY5 273 aa6.12□□□□□ -1.43
CD44-230ENST00000528922 MNTQ99583 582 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms