RNA–Protein interactions for RNA: ENST00000528865.5

CSTF3-208, Transcript of cleavage stimulation factor subunit 3, humanhuman

TSL 5

Gene CSTF3, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-208ENST00000528865 SBDSQ9Y3A5 250 aaKnown RBP eCLIP8.93□□□□□ -0.98
CSTF3-208ENST00000528865 ACTL7BQ9Y614 415 aa8.93□□□□□ -0.98
CSTF3-208ENST00000528865 RGPD3A6NKT7 1758 aaPredicted RBP8.93□□□□□ -0.98
CSTF3-208ENST00000528865 RGPD4Q7Z3J3 1758 aa8.93□□□□□ -0.98
CSTF3-208ENST00000528865 UMODL1Q5DID0 1318 aa8.92□□□□□ -0.98
CSTF3-208ENST00000528865 ADGRA3Q8IWK6 1321 aa8.92□□□□□ -0.98
CSTF3-208ENST00000528865 GAS8O95995 478 aa8.92□□□□□ -0.98
CSTF3-208ENST00000528865 HLA-DRAP01903 254 aa8.92□□□□□ -0.98
CSTF3-208ENST00000528865 NR3C2P08235 984 aa8.92□□□□□ -0.98
CSTF3-208ENST00000528865 POTEJP0CG39 1038 aa8.92□□□□□ -0.98
CSTF3-208ENST00000528865 KCNA2P16389 499 aa8.92□□□□□ -0.98
CSTF3-208ENST00000528865 KLRC2P26717 231 aa8.92□□□□□ -0.98
CSTF3-208ENST00000528865 CCND2P30279 289 aa8.92□□□□□ -0.98
CSTF3-208ENST00000528865 ITGA8P53708 1063 aa8.92□□□□□ -0.98
CSTF3-208ENST00000528865 OAZ1P54368 228 aa8.92□□□□□ -0.98
CSTF3-208ENST00000528865 MKRN3Q13064 507 aaKnown RBP8.92□□□□□ -0.98
CSTF3-208ENST00000528865 STAT4Q14765 748 aa8.92□□□□□ -0.98
CSTF3-208ENST00000528865 SNCBQ16143 134 aa8.92□□□□□ -0.98
CSTF3-208ENST00000528865 LIN9Q5TKA1 542 aa8.92□□□□□ -0.98
CSTF3-208ENST00000528865 ARHGEF16Q5VV41 709 aa8.92□□□□□ -0.98
CSTF3-208ENST00000528865 HIBCHQ6NVY1 386 aaPredicted RBP8.92□□□□□ -0.98
CSTF3-208ENST00000528865 ABHD15Q6UXT9 468 aa8.92□□□□□ -0.98
CSTF3-208ENST00000528865 TRPM8Q7Z2W7 1104 aa8.92□□□□□ -0.98
CSTF3-208ENST00000528865 CCDC91Q7Z6B0 441 aa8.92□□□□□ -0.98
CSTF3-208ENST00000528865 FAM228AQ86W67 206 aa8.92□□□□□ -0.98
CSTF3-208ENST00000528865 RHOT1Q8IXI2 618 aa8.92□□□□□ -0.98
CSTF3-208ENST00000528865 ABRAQ8N0Z2 381 aa8.92□□□□□ -0.98
CSTF3-208ENST00000528865 UBR7Q8N806 425 aa8.92□□□□□ -0.98
CSTF3-208ENST00000528865 REPS2Q8NFH8 660 aa8.92□□□□□ -0.98
CSTF3-208ENST00000528865 ARHGEF2Q92974 986 aaKnown RBP8.92□□□□□ -0.98
CSTF3-208ENST00000528865 ATP6V0A1Q93050 837 aa8.92□□□□□ -0.98
CSTF3-208ENST00000528865 CEP170P1Q96L14 293 aa8.92□□□□□ -0.98
CSTF3-208ENST00000528865 ELAC2Q9BQ52 826 aaKnown RBP8.92□□□□□ -0.98
CSTF3-208ENST00000528865 PLCD4Q9BRC7 762 aa8.92□□□□□ -0.98
CSTF3-208ENST00000528865 SH2D3AQ9BRG2 576 aa8.92□□□□□ -0.98
CSTF3-208ENST00000528865 KIFC3Q9BVG8 833 aa8.92□□□□□ -0.98
CSTF3-208ENST00000528865 HAUS2Q9NVX0 235 aa8.92□□□□□ -0.98
CSTF3-208ENST00000528865 NINJ2Q9NZG7 142 aa8.92□□□□□ -0.98
CSTF3-208ENST00000528865 SAMD15Q9P1V8 674 aa8.92□□□□□ -0.98
CSTF3-208ENST00000528865 GABBR1Q9UBS5 961 aa8.92□□□□□ -0.98
CSTF3-208ENST00000528865 PRKAG3Q9UGI9 489 aa8.92□□□□□ -0.98
CSTF3-208ENST00000528865 TCEAL9Q9UHQ7 104 aa8.92□□□□□ -0.98
CSTF3-208ENST00000528865 ANAPC5Q9UJX4 755 aa8.92□□□□□ -0.98
CSTF3-208ENST00000528865 TPX2Q9ULW0 747 aaKnown RBP8.92□□□□□ -0.98
CSTF3-208ENST00000528865 ADAMTS5Q9UNA0 930 aa8.92□□□□□ -0.98
CSTF3-208ENST00000528865 DRG1Q9Y295 367 aaKnown RBP8.92□□□□□ -0.98
CSTF3-208ENST00000528865 PTPN22Q9Y2R2 807 aa8.92□□□□□ -0.98
CSTF3-208ENST00000528865 ZBTB12Q9Y330 459 aaPredicted RBP8.92□□□□□ -0.98
CSTF3-208ENST00000528865 SPATA31C2B4DYI2 1134 aa8.91□□□□□ -0.98
CSTF3-208ENST00000528865 VWA5AO00534 786 aa8.91□□□□□ -0.98
CSTF3-208ENST00000528865 WNT10BO00744 389 aa8.91□□□□□ -0.98
CSTF3-208ENST00000528865 MAGEB2O15479 319 aa8.91□□□□□ -0.98
CSTF3-208ENST00000528865 STAM2O75886 525 aa8.91□□□□□ -0.98
CSTF3-208ENST00000528865 ATG7O95352 703 aa8.91□□□□□ -0.98
CSTF3-208ENST00000528865 GJB6O95452 261 aa8.91□□□□□ -0.98
CSTF3-208ENST00000528865 VNN1O95497 513 aa8.91□□□□□ -0.98
CSTF3-208ENST00000528865 PSAPP07602 524 aa8.91□□□□□ -0.98
CSTF3-208ENST00000528865 DLATP10515 647 aaKnown RBP8.91□□□□□ -0.98
CSTF3-208ENST00000528865 KRT5P13647 590 aa8.91□□□□□ -0.98
CSTF3-208ENST00000528865 ATF2P15336 505 aa8.91□□□□□ -0.98
CSTF3-208ENST00000528865 SLC18A1P54219 525 aa8.91□□□□□ -0.98
CSTF3-208ENST00000528865 NOMO3P69849 1222 aa8.91□□□□□ -0.98
CSTF3-208ENST00000528865 ELF3P78545 371 aaPredicted RBP8.91□□□□□ -0.98
CSTF3-208ENST00000528865 PPARDQ03181 441 aa8.91□□□□□ -0.98
CSTF3-208ENST00000528865 LMNB2Q03252 620 aa8.91□□□□□ -0.98
CSTF3-208ENST00000528865 C1QBPQ07021 282 aaKnown RBP8.91□□□□□ -0.98
CSTF3-208ENST00000528865 MAMLD1Q13495 774 aa8.91□□□□□ -0.98
CSTF3-208ENST00000528865 SNX1Q13596 522 aa8.91□□□□□ -0.98
CSTF3-208ENST00000528865 BAATQ14032 418 aaPredicted RBP8.91□□□□□ -0.98
CSTF3-208ENST00000528865 KYNUQ16719 465 aa8.91□□□□□ -0.98
CSTF3-208ENST00000528865 XKR3Q5GH77 459 aa8.91□□□□□ -0.98
CSTF3-208ENST00000528865 WDR44Q5JSH3 913 aa8.91□□□□□ -0.98
CSTF3-208ENST00000528865 LRRC38Q5VT99 294 aa8.91□□□□□ -0.98
CSTF3-208ENST00000528865 SLFN12LQ6IEE8 588 aa8.91□□□□□ -0.98
CSTF3-208ENST00000528865 CRELD2Q6UXH1 353 aaPredicted RBP8.91□□□□□ -0.98
CSTF3-208ENST00000528865 ANKS1BQ7Z6G8 1248 aa8.91□□□□□ -0.98
CSTF3-208ENST00000528865 RCOR2Q8IZ40 523 aa8.91□□□□□ -0.98
CSTF3-208ENST00000528865 RIBC1Q8N443 379 aaPredicted RBP8.91□□□□□ -0.98
CSTF3-208ENST00000528865 TTLL6Q8N841 843 aa8.91□□□□□ -0.98
CSTF3-208ENST00000528865 CCDC89Q8N998 374 aa8.91□□□□□ -0.98
CSTF3-208ENST00000528865 UHMK1Q8TAS1 419 aaKnown RBP8.91□□□□□ -0.98
CSTF3-208ENST00000528865 FEZF2Q8TBJ5 459 aa8.91□□□□□ -0.98
CSTF3-208ENST00000528865 CCHCR1Q8TD31 782 aa8.91□□□□□ -0.98
CSTF3-208ENST00000528865 CNKSR2Q8WXI2 1034 aa8.91□□□□□ -0.98
CSTF3-208ENST00000528865 CDHR1Q96JP9 859 aa8.91□□□□□ -0.98
CSTF3-208ENST00000528865 IFT74Q96LB3 600 aa8.91□□□□□ -0.98
CSTF3-208ENST00000528865 SCLT1Q96NL6 688 aa8.91□□□□□ -0.98
CSTF3-208ENST00000528865 NCAPGQ9BPX3 1015 aa8.91□□□□□ -0.98
CSTF3-208ENST00000528865 PI4K2AQ9BTU6 479 aa8.91□□□□□ -0.98
CSTF3-208ENST00000528865 OSBPL8Q9BZF1 889 aa8.91□□□□□ -0.98
CSTF3-208ENST00000528865 TRIM7Q9C029 511 aa8.91□□□□□ -0.98
CSTF3-208ENST00000528865 MTFR1LQ9H019 292 aa8.91□□□□□ -0.98
CSTF3-208ENST00000528865 ATP6V0A4Q9HBG4 840 aa8.91□□□□□ -0.98
CSTF3-208ENST00000528865 MRPL47Q9HD33 250 aaKnown RBP8.91□□□□□ -0.98
CSTF3-208ENST00000528865 CYP26B1Q9NR63 512 aa8.91□□□□□ -0.98
CSTF3-208ENST00000528865 C1orf112Q9NSG2 853 aa8.91□□□□□ -0.98
CSTF3-208ENST00000528865 ASIC3Q9UHC3 531 aa8.91□□□□□ -0.98
CSTF3-208ENST00000528865 R3HDM2Q9Y2K5 976 aaKnown RBP8.91□□□□□ -0.98
CSTF3-208ENST00000528865 USP15Q9Y4E8 981 aaPredicted RBP8.91□□□□□ -0.98
CSTF3-208ENST00000528865 COL4A5P29400 1685 aa8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 76.9 ms